RNA–Protein interactions for RNA: ENST00000367893.4

LMX1A-203, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1A, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-203ENST00000367893 ADAMTSL3P82987 1691 aa19.92■□□□□ 0.78
LMX1A-203ENST00000367893 CDK11AQ9UQ88 783 aaPredicted RBP19.92■□□□□ 0.78
LMX1A-203ENST00000367893 POGZQ7Z3K3 1410 aa19.9■□□□□ 0.78
LMX1A-203ENST00000367893 PTPRMP28827 1452 aa19.9■□□□□ 0.78
LMX1A-203ENST00000367893 KIF14Q15058 1648 aa19.89■□□□□ 0.78
LMX1A-203ENST00000367893 SCAPERQ9BY12 1400 aa19.89■□□□□ 0.77
LMX1A-203ENST00000367893 YEATS2Q9ULM3 1422 aa19.89■□□□□ 0.77
LMX1A-203ENST00000367893 MAGI2Q86UL8 1455 aa19.87■□□□□ 0.77
LMX1A-203ENST00000367893 BCORL1Q5H9F3 1711 aa19.86■□□□□ 0.77
LMX1A-203ENST00000367893 APLP2Q06481 763 aa19.86■□□□□ 0.77
LMX1A-203ENST00000367893 EFCAB2Q5VUJ9 269 aa19.86■□□□□ 0.77
LMX1A-203ENST00000367893 ARID4BQ4LE39 1312 aaPredicted RBP19.85■□□□□ 0.77
LMX1A-203ENST00000367893 ZFYVE16Q7Z3T8 1539 aa19.85■□□□□ 0.77
LMX1A-203ENST00000367893 LRRC9Q6ZRR7 1453 aa19.84■□□□□ 0.77
LMX1A-203ENST00000367893 MADDQ8WXG6 1647 aa19.82■□□□□ 0.76
LMX1A-203ENST00000367893 SIGLEC1Q9BZZ2 1709 aa19.81■□□□□ 0.76
LMX1A-203ENST00000367893 KANK4Q5T7N3 995 aaPredicted RBP19.8■□□□□ 0.76
LMX1A-203ENST00000367893 EHBP1L1Q8N3D4 1523 aa19.8■□□□□ 0.76
LMX1A-203ENST00000367893 MYO5CQ9NQX4 1742 aa19.79■□□□□ 0.76
LMX1A-203ENST00000367893 ARHGAP5Q13017 1502 aa19.78■□□□□ 0.76
LMX1A-203ENST00000367893 MTUS2Q5JR59 1369 aa19.76■□□□□ 0.75
LMX1A-203ENST00000367893 ZNF518AQ6AHZ1 1483 aa19.76■□□□□ 0.75
LMX1A-203ENST00000367893 AFAP1Q8N556 730 aa19.76■□□□□ 0.75
LMX1A-203ENST00000367893 ATP10AO60312 1499 aa19.76■□□□□ 0.75
LMX1A-203ENST00000367893 KDM5CP41229 1560 aa19.75■□□□□ 0.75
LMX1A-203ENST00000367893 C9orf84Q5VXU9 1444 aa19.73■□□□□ 0.75
LMX1A-203ENST00000367893 ARHGEF12Q9NZN5 1544 aa19.73■□□□□ 0.75
LMX1A-203ENST00000367893 SUPT6HQ7KZ85 1726 aaKnown RBP19.72■□□□□ 0.75
LMX1A-203ENST00000367893 LMTK3Q96Q04 1460 aa19.71■□□□□ 0.75
LMX1A-203ENST00000367893 TRAPPC8Q9Y2L5 1435 aa19.71■□□□□ 0.75
LMX1A-203ENST00000367893 PREX2Q70Z35 1606 aa19.71■□□□□ 0.75
LMX1A-203ENST00000367893 RIMS1Q86UR5 1692 aaKnown RBP19.7■□□□□ 0.74
LMX1A-203ENST00000367893 ABCC1P33527 1531 aa19.7■□□□□ 0.74
LMX1A-203ENST00000367893 CDC42BPBQ9Y5S2 1711 aa19.7■□□□□ 0.74
LMX1A-203ENST00000367893 MLH3Q9UHC1 1453 aa19.69■□□□□ 0.74
LMX1A-203ENST00000367893 MLECQ14165 292 aa19.69■□□□□ 0.74
LMX1A-203ENST00000367893 ILDR1Q86SU0 546 aaPredicted RBP19.69■□□□□ 0.74
LMX1A-203ENST00000367893 NCOA2Q15596 1464 aa19.67■□□□□ 0.74
LMX1A-203ENST00000367893 PPARGC1BQ86YN6 1023 aaKnown RBP19.67■□□□□ 0.74
LMX1A-203ENST00000367893 GPATCH8Q9UKJ3 1502 aaKnown RBP19.66■□□□□ 0.74
LMX1A-203ENST00000367893 DIP2CQ9Y2E4 1556 aa19.66■□□□□ 0.74
LMX1A-203ENST00000367893 REREQ9P2R6 1566 aa19.64■□□□□ 0.73
LMX1A-203ENST00000367893 CDC42BPAQ5VT25 1732 aa19.62■□□□□ 0.73
LMX1A-203ENST00000367893 ABCA6Q8N139 1617 aa19.62■□□□□ 0.73
LMX1A-203ENST00000367893 ITSN2Q9NZM3 1697 aa19.6■□□□□ 0.73
LMX1A-203ENST00000367893 SAMD9LQ8IVG5 1584 aa19.6■□□□□ 0.73
LMX1A-203ENST00000367893 PLPPR3Q6T4P5 718 aa19.59■□□□□ 0.73
LMX1A-203ENST00000367893 AGLP35573 1532 aa19.58■□□□□ 0.73
LMX1A-203ENST00000367893 FER1L4A9Z1Z3 1794 aa19.58■□□□□ 0.73
LMX1A-203ENST00000367893 HSPA2P54652 639 aa19.57■□□□□ 0.72
LMX1A-203ENST00000367893 KIAA1107Q9UPP5 1409 aa19.57■□□□□ 0.72
LMX1A-203ENST00000367893 SYCP2Q9BX26 1530 aa19.57■□□□□ 0.72
LMX1A-203ENST00000367893 MYT1LQ9UL68 1186 aa19.56■□□□□ 0.72
LMX1A-203ENST00000367893 ZNF777Q9ULD5 760 aaPredicted RBP19.56■□□□□ 0.72
LMX1A-203ENST00000367893 MYOM3Q5VTT5 1437 aa19.56■□□□□ 0.72
LMX1A-203ENST00000367893 CCNB3Q8WWL7 1395 aa19.56■□□□□ 0.72
LMX1A-203ENST00000367893 KIDINS220Q9ULH0 1771 aa19.55■□□□□ 0.72
LMX1A-203ENST00000367893 CEBPAP49715 358 aaPredicted RBP19.55■□□□□ 0.72
LMX1A-203ENST00000367893 HNRNPMP52272 730 aaKnown RBP eCLIP19.55■□□□□ 0.72
LMX1A-203ENST00000367893 CFDP1Q9UEE9 299 aaPredicted RBP19.54■□□□□ 0.72
LMX1A-203ENST00000367893 MIA2Q96PC5 1412 aa19.53■□□□□ 0.72
LMX1A-203ENST00000367893 RRBP1Q9P2E9 1410 aaKnown RBP19.53■□□□□ 0.72
LMX1A-203ENST00000367893 PLEKHH2Q8IVE3 1493 aa19.52■□□□□ 0.72
LMX1A-203ENST00000367893 SPAG9O60271 1321 aaKnown RBP19.51■□□□□ 0.71
LMX1A-203ENST00000367893 FGD6Q6ZV73 1430 aa19.51■□□□□ 0.71
LMX1A-203ENST00000367893 ZNF644Q9H582 1327 aaPredicted RBP19.49■□□□□ 0.71
LMX1A-203ENST00000367893 MBD5Q9P267 1494 aa19.48■□□□□ 0.71
LMX1A-203ENST00000367893 ATP7AQ04656 1500 aa19.47■□□□□ 0.71
LMX1A-203ENST00000367893 INO80Q9ULG1 1556 aaPredicted RBP19.47■□□□□ 0.71
LMX1A-203ENST00000367893 PTPN23Q9H3S7 1636 aa19.46■□□□□ 0.71
LMX1A-203ENST00000367893 TCOF1Q13428 1488 aaKnown RBP19.46■□□□□ 0.71
LMX1A-203ENST00000367893 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.46■□□□□ 0.71
LMX1A-203ENST00000367893 PLXNC1O60486 1568 aa19.45■□□□□ 0.7
LMX1A-203ENST00000367893 FBXO41Q8TF61 875 aa19.44■□□□□ 0.7
LMX1A-203ENST00000367893 PREX1Q8TCU6 1659 aa19.43■□□□□ 0.7
LMX1A-203ENST00000367893 CNTLNQ9NXG0 1405 aa19.43■□□□□ 0.7
LMX1A-203ENST00000367893 UHRF1BP1Q6BDS2 1440 aa19.42■□□□□ 0.7
LMX1A-203ENST00000367893 A2MP01023 1474 aa19.42■□□□□ 0.7
LMX1A-203ENST00000367893 C3P01024 1663 aa19.4■□□□□ 0.7
LMX1A-203ENST00000367893 TRIM26Q12899 539 aaPredicted RBP19.4■□□□□ 0.7
LMX1A-203ENST00000367893 CAMSAP2Q08AD1 1489 aa19.4■□□□□ 0.7
LMX1A-203ENST00000367893 ESF1Q9H501 851 aaKnown RBP19.39■□□□□ 0.69
LMX1A-203ENST00000367893 RTEL1-TNFRSF6BF6WH68 1400 aa19.38■□□□□ 0.69
LMX1A-203ENST00000367893 ZMYM3Q14202 1370 aa19.36■□□□□ 0.69
LMX1A-203ENST00000367893 NPATQ14207 1427 aa19.35■□□□□ 0.69
LMX1A-203ENST00000367893 ARHGEF5Q12774 1597 aa19.34■□□□□ 0.69
LMX1A-203ENST00000367893 CCDC141Q6ZP82 1450 aa19.34■□□□□ 0.69
LMX1A-203ENST00000367893 DNMT1P26358 1616 aaKnown RBP19.34■□□□□ 0.69
LMX1A-203ENST00000367893 DHX29Q7Z478 1369 aaKnown RBP19.33■□□□□ 0.68
LMX1A-203ENST00000367893 MROH2AA6NES4 1674 aa19.32■□□□□ 0.68
LMX1A-203ENST00000367893 FAM50AQ14320 339 aaKnown RBP19.32■□□□□ 0.68
LMX1A-203ENST00000367893 STRCQ7RTU9 1775 aa19.32■□□□□ 0.68
LMX1A-203ENST00000367893 GGT6Q6P531 493 aa19.31■□□□□ 0.68
LMX1A-203ENST00000367893 SETD1BQ9UPS6 1966 aaKnown RBP19.31■□□□□ 0.68
LMX1A-203ENST00000367893 PPP6R1Q9UPN7 881 aa19.3■□□□□ 0.68
LMX1A-203ENST00000367893 PTPRKQ15262 1439 aa19.29■□□□□ 0.68
LMX1A-203ENST00000367893 RSPH4AQ5TD94 716 aa19.29■□□□□ 0.68
LMX1A-203ENST00000367893 CERKQ8TCT0 537 aa19.29■□□□□ 0.68
LMX1A-203ENST00000367893 CROCC2H7BZ55 1655 aa19.29■□□□□ 0.68
LMX1A-203ENST00000367893 ADGBQ8N7X0 1667 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms