RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 MYO5CQ9NQX4 1742 aa23.56■■□□□ 1.36
SF3B5-201ENST00000367569 CDK11AQ9UQ88 783 aaPredicted RBP23.54■■□□□ 1.36
SF3B5-201ENST00000367569 MADDQ8WXG6 1647 aa23.54■■□□□ 1.36
SF3B5-201ENST00000367569 ZMYM4Q5VZL5 1548 aa23.54■■□□□ 1.36
SF3B5-201ENST00000367569 TROQ12816 1431 aaPredicted RBP23.52■■□□□ 1.36
SF3B5-201ENST00000367569 SCAPERQ9BY12 1400 aa23.52■■□□□ 1.36
SF3B5-201ENST00000367569 YEATS2Q9ULM3 1422 aa23.52■■□□□ 1.36
SF3B5-201ENST00000367569 ILDR1Q86SU0 546 aaPredicted RBP23.5■■□□□ 1.35
SF3B5-201ENST00000367569 ZFYVE16Q7Z3T8 1539 aa23.49■■□□□ 1.35
SF3B5-201ENST00000367569 EFCAB2Q5VUJ9 269 aa23.49■■□□□ 1.35
SF3B5-201ENST00000367569 SIGLEC1Q9BZZ2 1709 aa23.48■■□□□ 1.35
SF3B5-201ENST00000367569 POGZQ7Z3K3 1410 aa23.48■■□□□ 1.35
SF3B5-201ENST00000367569 MAGI2Q86UL8 1455 aa23.48■■□□□ 1.35
SF3B5-201ENST00000367569 RIMS1Q86UR5 1692 aaKnown RBP23.44■■□□□ 1.34
SF3B5-201ENST00000367569 CDC42BPAQ5VT25 1732 aa23.43■■□□□ 1.34
SF3B5-201ENST00000367569 CDC42BPBQ9Y5S2 1711 aa23.43■■□□□ 1.34
SF3B5-201ENST00000367569 PREX2Q70Z35 1606 aa23.43■■□□□ 1.34
SF3B5-201ENST00000367569 VPS8Q8N3P4 1428 aa23.42■■□□□ 1.34
SF3B5-201ENST00000367569 ARHGAP5Q13017 1502 aa23.41■■□□□ 1.34
SF3B5-201ENST00000367569 MLECQ14165 292 aa23.39■■□□□ 1.33
SF3B5-201ENST00000367569 TIAM1Q13009 1591 aa23.38■■□□□ 1.33
SF3B5-201ENST00000367569 ATP10AO60312 1499 aa23.37■■□□□ 1.33
SF3B5-201ENST00000367569 EHBP1L1Q8N3D4 1523 aa23.37■■□□□ 1.33
SF3B5-201ENST00000367569 PLPPR3Q6T4P5 718 aa23.36■■□□□ 1.33
SF3B5-201ENST00000367569 AFAP1Q8N556 730 aa23.36■■□□□ 1.33
SF3B5-201ENST00000367569 ZNF518AQ6AHZ1 1483 aa23.35■■□□□ 1.33
SF3B5-201ENST00000367569 LMTK3Q96Q04 1460 aa23.35■■□□□ 1.33
SF3B5-201ENST00000367569 MTUS2Q5JR59 1369 aa23.34■■□□□ 1.33
SF3B5-201ENST00000367569 C9orf84Q5VXU9 1444 aa23.33■■□□□ 1.33
SF3B5-201ENST00000367569 KDM5CP41229 1560 aa23.32■■□□□ 1.32
SF3B5-201ENST00000367569 FER1L4A9Z1Z3 1794 aa23.31■■□□□ 1.32
SF3B5-201ENST00000367569 ITSN2Q9NZM3 1697 aa23.29■■□□□ 1.32
SF3B5-201ENST00000367569 ARHGEF12Q9NZN5 1544 aa23.28■■□□□ 1.32
SF3B5-201ENST00000367569 SUPT6HQ7KZ85 1726 aaKnown RBP23.28■■□□□ 1.32
SF3B5-201ENST00000367569 MYT1LQ9UL68 1186 aa23.27■■□□□ 1.32
SF3B5-201ENST00000367569 TRAPPC8Q9Y2L5 1435 aa23.26■■□□□ 1.31
SF3B5-201ENST00000367569 HSPA2P54652 639 aa23.26■■□□□ 1.31
SF3B5-201ENST00000367569 ABCC1P33527 1531 aa23.26■■□□□ 1.31
SF3B5-201ENST00000367569 SAMD9LQ8IVG5 1584 aa23.26■■□□□ 1.31
SF3B5-201ENST00000367569 DIP2CQ9Y2E4 1556 aa23.25■■□□□ 1.31
SF3B5-201ENST00000367569 MLH3Q9UHC1 1453 aa23.24■■□□□ 1.31
SF3B5-201ENST00000367569 GPATCH8Q9UKJ3 1502 aaKnown RBP23.23■■□□□ 1.31
SF3B5-201ENST00000367569 ABCA6Q8N139 1617 aa23.22■■□□□ 1.31
SF3B5-201ENST00000367569 SYCP2Q9BX26 1530 aa23.2■■□□□ 1.3
SF3B5-201ENST00000367569 NCOA2Q15596 1464 aa23.2■■□□□ 1.3
SF3B5-201ENST00000367569 LRRC9Q6ZRR7 1453 aa23.2■■□□□ 1.3
SF3B5-201ENST00000367569 CCNB3Q8WWL7 1395 aa23.2■■□□□ 1.3
SF3B5-201ENST00000367569 CEBPAP49715 358 aaPredicted RBP23.2■■□□□ 1.3
SF3B5-201ENST00000367569 REREQ9P2R6 1566 aa23.19■■□□□ 1.3
SF3B5-201ENST00000367569 ZNF777Q9ULD5 760 aaPredicted RBP23.19■■□□□ 1.3
SF3B5-201ENST00000367569 KIDINS220Q9ULH0 1771 aa23.17■■□□□ 1.3
SF3B5-201ENST00000367569 KANK4Q5T7N3 995 aaPredicted RBP23.14■■□□□ 1.29
SF3B5-201ENST00000367569 FBXO41Q8TF61 875 aa23.13■■□□□ 1.29
SF3B5-201ENST00000367569 AGLP35573 1532 aa23.13■■□□□ 1.29
SF3B5-201ENST00000367569 MAP3K1Q13233 1512 aa23.13■■□□□ 1.29
SF3B5-201ENST00000367569 HNRNPMP52272 730 aaKnown RBP eCLIP23.12■■□□□ 1.29
SF3B5-201ENST00000367569 PREX1Q8TCU6 1659 aa23.11■■□□□ 1.29
SF3B5-201ENST00000367569 CFDP1Q9UEE9 299 aaPredicted RBP23.1■■□□□ 1.29
SF3B5-201ENST00000367569 ZNF644Q9H582 1327 aaPredicted RBP23.08■■□□□ 1.28
SF3B5-201ENST00000367569 SETD1BQ9UPS6 1966 aaKnown RBP23.07■■□□□ 1.28
SF3B5-201ENST00000367569 SPAG9O60271 1321 aaKnown RBP23.07■■□□□ 1.28
SF3B5-201ENST00000367569 CAMSAP2Q08AD1 1489 aa23.06■■□□□ 1.28
SF3B5-201ENST00000367569 KIAA1107Q9UPP5 1409 aa23.06■■□□□ 1.28
SF3B5-201ENST00000367569 C3P01024 1663 aa23.06■■□□□ 1.28
SF3B5-201ENST00000367569 ESF1Q9H501 851 aaKnown RBP23.04■■□□□ 1.28
SF3B5-201ENST00000367569 PLEKHH2Q8IVE3 1493 aa23.04■■□□□ 1.28
SF3B5-201ENST00000367569 INO80Q9ULG1 1556 aaPredicted RBP23.03■■□□□ 1.28
SF3B5-201ENST00000367569 APLP2Q06481 763 aa23.03■■□□□ 1.28
SF3B5-201ENST00000367569 UHRF1BP1Q6BDS2 1440 aa23.02■■□□□ 1.28
SF3B5-201ENST00000367569 ATP7AQ04656 1500 aa23.02■■□□□ 1.28
SF3B5-201ENST00000367569 STRCQ7RTU9 1775 aa22.98■■□□□ 1.27
SF3B5-201ENST00000367569 CNTLNQ9NXG0 1405 aa22.98■■□□□ 1.27
SF3B5-201ENST00000367569 MYOM3Q5VTT5 1437 aa22.97■■□□□ 1.27
SF3B5-201ENST00000367569 PLXNC1O60486 1568 aa22.95■■□□□ 1.26
SF3B5-201ENST00000367569 A2MP01023 1474 aa22.95■■□□□ 1.26
SF3B5-201ENST00000367569 MBD5Q9P267 1494 aa22.95■■□□□ 1.26
SF3B5-201ENST00000367569 ADGBQ8N7X0 1667 aa22.94■■□□□ 1.26
SF3B5-201ENST00000367569 CERKQ8TCT0 537 aa22.93■■□□□ 1.26
SF3B5-201ENST00000367569 PTPN23Q9H3S7 1636 aa22.93■■□□□ 1.26
SF3B5-201ENST00000367569 ZMYM3Q14202 1370 aa22.92■■□□□ 1.26
SF3B5-201ENST00000367569 CCDC141Q6ZP82 1450 aa22.92■■□□□ 1.26
SF3B5-201ENST00000367569 MROH2AA6NES4 1674 aa22.91■■□□□ 1.26
SF3B5-201ENST00000367569 ARHGEF5Q12774 1597 aa22.9■■□□□ 1.26
SF3B5-201ENST00000367569 DMRT2Q9Y5R5 561 aa22.9■■□□□ 1.26
SF3B5-201ENST00000367569 PPARGC1BQ86YN6 1023 aaKnown RBP22.89■■□□□ 1.25
SF3B5-201ENST00000367569 CROCC2H7BZ55 1655 aa22.89■■□□□ 1.25
SF3B5-201ENST00000367569 CLTCQ00610 1675 aaKnown RBP22.88■■□□□ 1.25
SF3B5-201ENST00000367569 GGT6Q6P531 493 aa22.88■■□□□ 1.25
SF3B5-201ENST00000367569 NPATQ14207 1427 aa22.87■■□□□ 1.25
SF3B5-201ENST00000367569 RTEL1-TNFRSF6BF6WH68 1400 aa22.85■■□□□ 1.25
SF3B5-201ENST00000367569 FGD6Q6ZV73 1430 aa22.84■■□□□ 1.25
SF3B5-201ENST00000367569 MIA2Q96PC5 1412 aa22.84■■□□□ 1.25
SF3B5-201ENST00000367569 PTPRTO14522 1441 aa22.82■■□□□ 1.24
SF3B5-201ENST00000367569 DHX29Q7Z478 1369 aaKnown RBP22.81■■□□□ 1.24
SF3B5-201ENST00000367569 NCOA1Q15788 1441 aa22.81■■□□□ 1.24
SF3B5-201ENST00000367569 PPP6R1Q9UPN7 881 aa22.8■■□□□ 1.24
SF3B5-201ENST00000367569 PTPRKQ15262 1439 aa22.8■■□□□ 1.24
SF3B5-201ENST00000367569 DNMT1P26358 1616 aaKnown RBP22.79■■□□□ 1.24
SF3B5-201ENST00000367569 MAST1Q9Y2H9 1570 aa22.79■■□□□ 1.24
SF3B5-201ENST00000367569 CAMSAP1Q5T5Y3 1602 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms