RNA–Protein interactions for RNA: ENST00000367441.1

TROVE2-201, Transcript of TROVE domain family member 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROVE2, Length 1,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROVE2-201ENST00000367441 KIF13AQ9H1H9 1805 aa11.71□□□□□ -0.53
TROVE2-201ENST00000367441 CFDP1Q9UEE9 299 aaPredicted RBP11.71□□□□□ -0.54
TROVE2-201ENST00000367441 RRBP1Q9P2E9 1410 aaKnown RBP11.7□□□□□ -0.54
TROVE2-201ENST00000367441 FAM69CQ0P6D2 419 aa11.7□□□□□ -0.54
TROVE2-201ENST00000367441 TRIM26Q12899 539 aaPredicted RBP11.7□□□□□ -0.54
TROVE2-201ENST00000367441 FAM50AQ14320 339 aaKnown RBP11.7□□□□□ -0.54
TROVE2-201ENST00000367441 ZNF777Q9ULD5 760 aaPredicted RBP11.7□□□□□ -0.54
TROVE2-201ENST00000367441 MAP3K4Q9Y6R4 1608 aa11.69□□□□□ -0.54
TROVE2-201ENST00000367441 TSPOAP1O95153 1857 aa11.69□□□□□ -0.54
TROVE2-201ENST00000367441 MIA2Q96PC5 1412 aa11.69□□□□□ -0.54
TROVE2-201ENST00000367441 GLI2P10070 1586 aa11.69□□□□□ -0.54
TROVE2-201ENST00000367441 CAMSAP2Q08AD1 1489 aa11.69□□□□□ -0.54
TROVE2-201ENST00000367441 PLCH2O75038 1416 aa11.68□□□□□ -0.54
TROVE2-201ENST00000367441 CD109Q6YHK3 1445 aa11.68□□□□□ -0.54
TROVE2-201ENST00000367441 ZNF644Q9H582 1327 aaPredicted RBP11.67□□□□□ -0.54
TROVE2-201ENST00000367441 FANCAO15360 1455 aa11.67□□□□□ -0.54
TROVE2-201ENST00000367441 PCGF6Q9BYE7 350 aa11.67□□□□□ -0.54
TROVE2-201ENST00000367441 SAMD9LQ8IVG5 1584 aa11.66□□□□□ -0.54
TROVE2-201ENST00000367441 ARAP3Q8WWN8 1544 aa11.66□□□□□ -0.54
TROVE2-201ENST00000367441 ITGAEP38570 1179 aa11.66□□□□□ -0.54
TROVE2-201ENST00000367441 TCOF1Q13428 1488 aaKnown RBP11.65□□□□□ -0.54
TROVE2-201ENST00000367441 PRKCSHP14314 528 aaPredicted RBP11.65□□□□□ -0.54
TROVE2-201ENST00000367441 CFAP74Q9C0B2 1584 aa11.65□□□□□ -0.54
TROVE2-201ENST00000367441 TRHP20396 242 aaPredicted RBP11.64□□□□□ -0.55
TROVE2-201ENST00000367441 SYCP2Q9BX26 1530 aa11.64□□□□□ -0.55
TROVE2-201ENST00000367441 EFCAB2Q5VUJ9 269 aa11.64□□□□□ -0.55
TROVE2-201ENST00000367441 PPRC1Q5VV67 1664 aaKnown RBP11.63□□□□□ -0.55
TROVE2-201ENST00000367441 ABCC1P33527 1531 aa11.62□□□□□ -0.55
TROVE2-201ENST00000367441 ADGRL1O94910 1474 aa11.62□□□□□ -0.55
TROVE2-201ENST00000367441 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.62□□□□□ -0.55
TROVE2-201ENST00000367441 DNMT1P26358 1616 aaKnown RBP11.62□□□□□ -0.55
TROVE2-201ENST00000367441 ERICH6Q7L0X2 663 aa11.62□□□□□ -0.55
TROVE2-201ENST00000367441 PLEKHH2Q8IVE3 1493 aa11.6□□□□□ -0.55
TROVE2-201ENST00000367441 TEX14Q8IWB6 1497 aa11.6□□□□□ -0.55
TROVE2-201ENST00000367441 CROCC2H7BZ55 1655 aa11.6□□□□□ -0.55
TROVE2-201ENST00000367441 DAPK1P53355 1430 aa11.59□□□□□ -0.55
TROVE2-201ENST00000367441 AKNAQ7Z591 1439 aa11.59□□□□□ -0.55
TROVE2-201ENST00000367441 HNRNPMP52272 730 aaKnown RBP eCLIP11.59□□□□□ -0.55
TROVE2-201ENST00000367441 NEO1Q92859 1461 aa11.59□□□□□ -0.55
TROVE2-201ENST00000367441 ARHGEF12Q9NZN5 1544 aa11.58□□□□□ -0.55
TROVE2-201ENST00000367441 ARHGEF5Q12774 1597 aa11.58□□□□□ -0.56
TROVE2-201ENST00000367441 CCDC141Q6ZP82 1450 aa11.58□□□□□ -0.56
TROVE2-201ENST00000367441 SCAPERQ9BY12 1400 aa11.58□□□□□ -0.56
TROVE2-201ENST00000367441 KIAA1107Q9UPP5 1409 aa11.58□□□□□ -0.56
TROVE2-201ENST00000367441 MBD5Q9P267 1494 aa11.57□□□□□ -0.56
TROVE2-201ENST00000367441 ABCC5O15440 1437 aa11.57□□□□□ -0.56
TROVE2-201ENST00000367441 CHIC2Q9UKJ5 165 aa11.56□□□□□ -0.56
TROVE2-201ENST00000367441 PTPRKQ15262 1439 aa11.56□□□□□ -0.56
TROVE2-201ENST00000367441 ADGBQ8N7X0 1667 aa11.56□□□□□ -0.56
TROVE2-201ENST00000367441 TRAPPC8Q9Y2L5 1435 aa11.55□□□□□ -0.56
TROVE2-201ENST00000367441 C9orf84Q5VXU9 1444 aa11.54□□□□□ -0.56
TROVE2-201ENST00000367441 ZNF518AQ6AHZ1 1483 aa11.54□□□□□ -0.56
TROVE2-201ENST00000367441 SHANK2Q9UPX8 1470 aa11.54□□□□□ -0.56
TROVE2-201ENST00000367441 POGZQ7Z3K3 1410 aa11.54□□□□□ -0.56
TROVE2-201ENST00000367441 TSPY4P0CV99 314 aa11.54□□□□□ -0.56
TROVE2-201ENST00000367441 TSPY10P0CW01 314 aa11.54□□□□□ -0.56
TROVE2-201ENST00000367441 DENND4BO75064 1496 aaPredicted RBP11.53□□□□□ -0.56
TROVE2-201ENST00000367441 AFAP1Q8N556 730 aa11.53□□□□□ -0.56
TROVE2-201ENST00000367441 RICTORQ6R327 1708 aa11.53□□□□□ -0.56
TROVE2-201ENST00000367441 RSPH4AQ5TD94 716 aa11.52□□□□□ -0.57
TROVE2-201ENST00000367441 MYT1LQ9UL68 1186 aa11.52□□□□□ -0.57
TROVE2-201ENST00000367441 RAPGEF3O95398 923 aa11.51□□□□□ -0.57
TROVE2-201ENST00000367441 ZFYVE16Q7Z3T8 1539 aa11.51□□□□□ -0.57
TROVE2-201ENST00000367441 KDM5CP41229 1560 aa11.51□□□□□ -0.57
TROVE2-201ENST00000367441 MAST1Q9Y2H9 1570 aa11.51□□□□□ -0.57
TROVE2-201ENST00000367441 NCBP3Q53F19 620 aaKnown RBP11.51□□□□□ -0.57
TROVE2-201ENST00000367441 RRP7BPQ9NSQ0 103 aa11.51□□□□□ -0.57
TROVE2-201ENST00000367441 GCC2Q8IWJ2 1684 aa11.5□□□□□ -0.57
TROVE2-201ENST00000367441 FRMPD1Q5SYB0 1578 aa11.5□□□□□ -0.57
TROVE2-201ENST00000367441 HECW2Q9P2P5 1572 aa11.5□□□□□ -0.57
TROVE2-201ENST00000367441 INO80Q9ULG1 1556 aaPredicted RBP11.5□□□□□ -0.57
TROVE2-201ENST00000367441 SPAG9O60271 1321 aaKnown RBP11.5□□□□□ -0.57
TROVE2-201ENST00000367441 ATP7AQ04656 1500 aa11.5□□□□□ -0.57
TROVE2-201ENST00000367441 ANKRD30AQ9BXX3 1397 aa11.5□□□□□ -0.57
TROVE2-201ENST00000367441 ADGRL2O95490 1459 aa11.49□□□□□ -0.57
TROVE2-201ENST00000367441 HFM1A2PYH4 1435 aa11.49□□□□□ -0.57
TROVE2-201ENST00000367441 PLXNC1O60486 1568 aa11.48□□□□□ -0.57
TROVE2-201ENST00000367441 ROCK1Q13464 1354 aa11.48□□□□□ -0.57
TROVE2-201ENST00000367441 KDM6BO15054 1643 aa11.48□□□□□ -0.57
TROVE2-201ENST00000367441 KIDINS220Q9ULH0 1771 aa11.48□□□□□ -0.57
TROVE2-201ENST00000367441 NCOA1Q15788 1441 aa11.48□□□□□ -0.57
TROVE2-201ENST00000367441 KIF15Q9NS87 1388 aa11.47□□□□□ -0.57
TROVE2-201ENST00000367441 COL17A1Q9UMD9 1497 aaPredicted RBP11.47□□□□□ -0.57
TROVE2-201ENST00000367441 NAIPQ13075 1403 aa11.47□□□□□ -0.57
TROVE2-201ENST00000367441 SETD5Q9C0A6 1442 aa11.46□□□□□ -0.57
TROVE2-201ENST00000367441 ZMYM4Q5VZL5 1548 aa11.46□□□□□ -0.58
TROVE2-201ENST00000367441 RTEL1-TNFRSF6BF6WH68 1400 aa11.45□□□□□ -0.58
TROVE2-201ENST00000367441 ABCA6Q8N139 1617 aa11.45□□□□□ -0.58
TROVE2-201ENST00000367441 RAB3GAP2Q9H2M9 1393 aa11.45□□□□□ -0.58
TROVE2-201ENST00000367441 MLH3Q9UHC1 1453 aa11.45□□□□□ -0.58
TROVE2-201ENST00000367441 DUOX2Q9NRD8 1548 aa11.43□□□□□ -0.58
TROVE2-201ENST00000367441 ANKRD50Q9ULJ7 1429 aa11.43□□□□□ -0.58
TROVE2-201ENST00000367441 YEATS2Q9ULM3 1422 aa11.43□□□□□ -0.58
TROVE2-201ENST00000367441 DIP2CQ9Y2E4 1556 aa11.43□□□□□ -0.58
TROVE2-201ENST00000367441 ARHGEF40Q8TER5 1519 aa11.41□□□□□ -0.58
TROVE2-201ENST00000367441 MAGI2Q86UL8 1455 aa11.41□□□□□ -0.58
TROVE2-201ENST00000367441 ERBINQ96RT1 1412 aa11.4□□□□□ -0.58
TROVE2-201ENST00000367441 A2MP01023 1474 aa11.39□□□□□ -0.59
TROVE2-201ENST00000367441 EIF2AK4Q9P2K8 1649 aaKnown RBP11.37□□□□□ -0.59
TROVE2-201ENST00000367441 TRIM52Q96A61 297 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms