RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 KIF3BO15066 747 aa21.42■■□□□ 1.02
SCAF8-201ENST00000367178 SOX12O15370 315 aa21.41■■□□□ 1.02
SCAF8-201ENST00000367178 FANCD2Q9BXW9 1451 aa21.39■■□□□ 1.01
SCAF8-201ENST00000367178 MS4A1P11836 297 aa21.39■■□□□ 1.01
SCAF8-201ENST00000367178 RSPH4AQ5TD94 716 aa21.39■■□□□ 1.01
SCAF8-201ENST00000367178 CCDC18Q5T9S5 1454 aa21.38■■□□□ 1.01
SCAF8-201ENST00000367178 ROCK2O75116 1388 aaKnown RBP21.38■■□□□ 1.01
SCAF8-201ENST00000367178 CHMP4BQ9H444 224 aaKnown RBP21.38■■□□□ 1.01
SCAF8-201ENST00000367178 RGS3P49796 1198 aa21.37■■□□□ 1.01
SCAF8-201ENST00000367178 CASC1Q6TDU7 716 aa21.36■■□□□ 1.01
SCAF8-201ENST00000367178 SPAG9O60271 1321 aaKnown RBP21.36■■□□□ 1.01
SCAF8-201ENST00000367178 KTN1Q86UP2 1357 aaKnown RBP21.35■■□□□ 1.01
SCAF8-201ENST00000367178 HDGFL2Q7Z4V5 671 aaPredicted RBP21.34■■□□□ 1.01
SCAF8-201ENST00000367178 RUSC2Q8N2Y8 1516 aa21.33■■□□□ 1.01
SCAF8-201ENST00000367178 L3MBTL2Q969R5 705 aa21.33■■□□□ 1.01
SCAF8-201ENST00000367178 NCLP19338 710 aaKnown RBP21.31■■□□□ 1
SCAF8-201ENST00000367178 GOLGA6L22H0YM25 854 aa21.3■■□□□ 1
SCAF8-201ENST00000367178 B4GALNT3Q6L9W6 998 aa21.3■■□□□ 1
SCAF8-201ENST00000367178 WASHC2CQ9Y4E1 1318 aa21.26■□□□□ 0.99
SCAF8-201ENST00000367178 RALBP1Q15311 655 aa21.25■□□□□ 0.99
SCAF8-201ENST00000367178 OS9Q13438 667 aaPredicted RBP21.25■□□□□ 0.99
SCAF8-201ENST00000367178 ANP32EQ9BTT0 268 aa21.24■□□□□ 0.99
SCAF8-201ENST00000367178 U2AF1L5P0DN76 240 aaPredicted RBP21.23■□□□□ 0.99
SCAF8-201ENST00000367178 U2AF1Q01081 240 aaKnown RBP eCLIP21.23■□□□□ 0.992e-7■■□□□ 13
SCAF8-201ENST00000367178 PTPRGP23470 1445 aa21.23■□□□□ 0.99
SCAF8-201ENST00000367178 EIF3AQ14152 1382 aaKnown RBP21.23■□□□□ 0.99
SCAF8-201ENST00000367178 RTF1Q92541 710 aaKnown RBP21.22■□□□□ 0.99
SCAF8-201ENST00000367178 PAK3O75914 559 aaPredicted RBP21.19■□□□□ 0.98
SCAF8-201ENST00000367178 NPHP1O15259 732 aa21.19■□□□□ 0.98
SCAF8-201ENST00000367178 GLIPR1L2Q4G1C9 344 aa21.19■□□□□ 0.98
SCAF8-201ENST00000367178 IGF1RP08069 1367 aa21.17■□□□□ 0.98
SCAF8-201ENST00000367178 FGD5Q6ZNL6 1462 aa21.16■□□□□ 0.98
SCAF8-201ENST00000367178 NUTM2DQ5VT03 806 aaPredicted RBP21.16■□□□□ 0.98
SCAF8-201ENST00000367178 TERF2IPQ9NYB0 399 aa21.15■□□□□ 0.98
SCAF8-201ENST00000367178 GAPVD1Q14C86 1478 aa21.14■□□□□ 0.97
SCAF8-201ENST00000367178 EID1Q9Y6B2 187 aa21.13■□□□□ 0.97
SCAF8-201ENST00000367178 IPO8O15397 1037 aaKnown RBP21.12■□□□□ 0.97
SCAF8-201ENST00000367178 CALD1Q05682 793 aaKnown RBP21.12■□□□□ 0.97
SCAF8-201ENST00000367178 DHX57Q6P158 1386 aaKnown RBP21.11■□□□□ 0.97
SCAF8-201ENST00000367178 RCAN3Q9UKA8 241 aa21.11■□□□□ 0.97
SCAF8-201ENST00000367178 KCNJ4P48050 445 aa21.11■□□□□ 0.97
SCAF8-201ENST00000367178 CCDC144AA2RUR9 1427 aa21.11■□□□□ 0.97
SCAF8-201ENST00000367178 TRIM44Q96DX7 344 aaPredicted RBP21.1■□□□□ 0.97
SCAF8-201ENST00000367178 RAD54L2Q9Y4B4 1467 aa21.1■□□□□ 0.97
SCAF8-201ENST00000367178 ZRSR1Q15695 479 aaKnown RBP21.09■□□□□ 0.97
SCAF8-201ENST00000367178 NLRP13Q86W25 1043 aa21.09■□□□□ 0.97
SCAF8-201ENST00000367178 FGD1P98174 961 aa21.08■□□□□ 0.97
SCAF8-201ENST00000367178 TRAK1Q9UPV9 953 aa21.08■□□□□ 0.97
SCAF8-201ENST00000367178 NCAPD3P42695 1498 aa21.07■□□□□ 0.96
SCAF8-201ENST00000367178 CSB-PGBD3P0DP91 1061 aa21.07■□□□□ 0.96
SCAF8-201ENST00000367178 TPRNQ4KMQ1 711 aa21.07■□□□□ 0.96
SCAF8-201ENST00000367178 CYB5RLQ6IPT4 315 aa21.07■□□□□ 0.96
SCAF8-201ENST00000367178 ST20-MTHFSA0A0A6YYL1 179 aa21.07■□□□□ 0.96
SCAF8-201ENST00000367178 HSP90AB1P08238 724 aaKnown RBP21.06■□□□□ 0.96
SCAF8-201ENST00000367178 CDK11BP21127 795 aaKnown RBP21.06■□□□□ 0.96
SCAF8-201ENST00000367178 OSCARQ8IYS5 282 aa21.06■□□□□ 0.96
SCAF8-201ENST00000367178 GOLGA2Q08379 1002 aa21.04■□□□□ 0.96
SCAF8-201ENST00000367178 NGDNQ8NEJ9 315 aaKnown RBP21.04■□□□□ 0.96
SCAF8-201ENST00000367178 NOP58Q9Y2X3 529 aaKnown RBP21.03■□□□□ 0.96
SCAF8-201ENST00000367178 ERICH6BQ5W0A0 696 aa21.02■□□□□ 0.95
SCAF8-201ENST00000367178 APBB1O00213 710 aa20.99■□□□□ 0.95
SCAF8-201ENST00000367178 ITPRIPQ8IWB1 547 aa20.99■□□□□ 0.95
SCAF8-201ENST00000367178 TAOK2Q9UL54 1235 aa20.99■□□□□ 0.95
SCAF8-201ENST00000367178 NUTM2FA1L443 756 aa20.99■□□□□ 0.95
SCAF8-201ENST00000367178 VGFO15240 615 aaPredicted RBP20.98■□□□□ 0.95
SCAF8-201ENST00000367178 PTMAP06454 111 aaKnown RBP20.98■□□□□ 0.95
SCAF8-201ENST00000367178 UACAQ9BZF9 1416 aa20.98■□□□□ 0.95
SCAF8-201ENST00000367178 HSCBQ8IWL3 235 aa20.98■□□□□ 0.95
SCAF8-201ENST00000367178 CCDC146Q8IYE0 955 aa20.98■□□□□ 0.95
SCAF8-201ENST00000367178 NAP1L2Q9ULW6 460 aaPredicted RBP20.97■□□□□ 0.95
SCAF8-201ENST00000367178 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.97■□□□□ 0.952e-6■□□□□ 11.3
SCAF8-201ENST00000367178 CHMP4AQ9BY43 222 aa20.97■□□□□ 0.95
SCAF8-201ENST00000367178 RWDD1Q9H446 243 aaPredicted RBP20.96■□□□□ 0.95
SCAF8-201ENST00000367178 MYOM3Q5VTT5 1437 aa20.96■□□□□ 0.95
SCAF8-201ENST00000367178 PANK3Q9H999 370 aa20.96■□□□□ 0.95
SCAF8-201ENST00000367178 CFAP44Q96MT7 982 aa20.96■□□□□ 0.95
SCAF8-201ENST00000367178 KIF15Q9NS87 1388 aa20.95■□□□□ 0.95
SCAF8-201ENST00000367178 AQRO60306 1485 aaKnown RBP eCLIP20.95■□□□□ 0.958e-7■■■■□ 22.5
SCAF8-201ENST00000367178 STK31Q9BXU1 1019 aa20.95■□□□□ 0.94
SCAF8-201ENST00000367178 MCCP23508 829 aa20.95■□□□□ 0.94
SCAF8-201ENST00000367178 SMC4Q9NTJ3 1288 aa20.95■□□□□ 0.94
SCAF8-201ENST00000367178 PHLDB1Q86UU1 1377 aa20.94■□□□□ 0.94
SCAF8-201ENST00000367178 AMPHP49418 695 aa20.94■□□□□ 0.94
SCAF8-201ENST00000367178 PDE3BQ13370 1112 aa20.94■□□□□ 0.94
SCAF8-201ENST00000367178 ZNF330Q9Y3S2 320 aaPredicted RBP20.93■□□□□ 0.94
SCAF8-201ENST00000367178 MYBBP1AQ9BQG0 1328 aaKnown RBP20.92■□□□□ 0.94
SCAF8-201ENST00000367178 ZNF644Q9H582 1327 aaPredicted RBP20.91■□□□□ 0.94
SCAF8-201ENST00000367178 FGD6Q6ZV73 1430 aa20.91■□□□□ 0.94
SCAF8-201ENST00000367178 USP47Q96K76 1375 aa20.9■□□□□ 0.94
SCAF8-201ENST00000367178 LMOD3Q0VAK6 560 aa20.9■□□□□ 0.94
SCAF8-201ENST00000367178 CLUAP1Q96AJ1 413 aa20.88■□□□□ 0.93
SCAF8-201ENST00000367178 LTV1Q96GA3 475 aaPredicted RBP20.88■□□□□ 0.93
SCAF8-201ENST00000367178 EVC2Q86UK5 1308 aa20.88■□□□□ 0.93
SCAF8-201ENST00000367178 CENPJQ9HC77 1338 aaPredicted RBP20.88■□□□□ 0.93
SCAF8-201ENST00000367178 PRKRIP1Q9H875 184 aaPredicted RBP20.86■□□□□ 0.93
SCAF8-201ENST00000367178 PLCB2Q00722 1185 aa20.86■□□□□ 0.93
SCAF8-201ENST00000367178 PMFBP1Q8TBY8 1022 aa20.86■□□□□ 0.93
SCAF8-201ENST00000367178 RBM19Q9Y4C8 960 aaKnown RBP20.85■□□□□ 0.93
SCAF8-201ENST00000367178 TCERG1O14776 1098 aaKnown RBP20.85■□□□□ 0.93
SCAF8-201ENST00000367178 KIAA1211Q6ZU35 1233 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms