RNA–Protein interactions for RNA: ENST00000366981.8

ATF3-203, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best)

Gene ATF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-203ENST00000366981 TCOF1Q13428 1488 aaKnown RBP11.2□□□□□ -0.62
ATF3-203ENST00000366981 PTPRGP23470 1445 aa11.2□□□□□ -0.62
ATF3-203ENST00000366981 MYOM3Q5VTT5 1437 aa11.2□□□□□ -0.62
ATF3-203ENST00000366981 HRCP23327 699 aa11.2□□□□□ -0.62
ATF3-203ENST00000366981 ABCC2Q92887 1545 aa11.19□□□□□ -0.62
ATF3-203ENST00000366981 ATP10BO94823 1461 aa11.19□□□□□ -0.62
ATF3-203ENST00000366981 FGD6Q6ZV73 1430 aa11.19□□□□□ -0.62
ATF3-203ENST00000366981 TROQ12816 1431 aaPredicted RBP11.18□□□□□ -0.62
ATF3-203ENST00000366981 UACAQ9BZF9 1416 aa11.18□□□□□ -0.62
ATF3-203ENST00000366981 MAPKBP1O60336 1514 aa11.18□□□□□ -0.62
ATF3-203ENST00000366981 MIA2Q96PC5 1412 aa11.18□□□□□ -0.62
ATF3-203ENST00000366981 PTPN23Q9H3S7 1636 aa11.17□□□□□ -0.62
ATF3-203ENST00000366981 SLC4A2P04920 1241 aa11.16□□□□□ -0.62
ATF3-203ENST00000366981 FAM69CQ0P6D2 419 aa11.16□□□□□ -0.62
ATF3-203ENST00000366981 ITSN2Q9NZM3 1697 aa11.16□□□□□ -0.62
ATF3-203ENST00000366981 DIP2BQ9P265 1576 aa11.16□□□□□ -0.62
ATF3-203ENST00000366981 ATP1B4Q9UN42 357 aaPredicted RBP11.15□□□□□ -0.62
ATF3-203ENST00000366981 KDM6BO15054 1643 aa11.15□□□□□ -0.62
ATF3-203ENST00000366981 KIF14Q15058 1648 aa11.15□□□□□ -0.62
ATF3-203ENST00000366981 CDC42BPAQ5VT25 1732 aa11.15□□□□□ -0.63
ATF3-203ENST00000366981 KDM5BQ9UGL1 1544 aa11.14□□□□□ -0.63
ATF3-203ENST00000366981 ZCCHC11Q5TAX3 1644 aaKnown RBP11.13□□□□□ -0.63
ATF3-203ENST00000366981 CDK11AQ9UQ88 783 aaPredicted RBP11.12□□□□□ -0.63
ATF3-203ENST00000366981 MYCNP04198 464 aaPredicted RBP11.11□□□□□ -0.63
ATF3-203ENST00000366981 GPATCH8Q9UKJ3 1502 aaKnown RBP11.1□□□□□ -0.63
ATF3-203ENST00000366981 DNMT1P26358 1616 aaKnown RBP11.09□□□□□ -0.63
ATF3-203ENST00000366981 HECW2Q9P2P5 1572 aa11.09□□□□□ -0.63
ATF3-203ENST00000366981 CDC42BPBQ9Y5S2 1711 aa11.09□□□□□ -0.63
ATF3-203ENST00000366981 AKNAQ7Z591 1439 aa11.09□□□□□ -0.63
ATF3-203ENST00000366981 GCC2Q8IWJ2 1684 aa11.08□□□□□ -0.64
ATF3-203ENST00000366981 ADGRL1O94910 1474 aa11.08□□□□□ -0.64
ATF3-203ENST00000366981 ZEB1P37275 1124 aaPredicted RBP11.08□□□□□ -0.64
ATF3-203ENST00000366981 C1QBPQ07021 282 aaKnown RBP11.08□□□□□ -0.64
ATF3-203ENST00000366981 HNRNPUL2Q1KMD3 747 aaKnown RBP11.08□□□□□ -0.64
ATF3-203ENST00000366981 PREX2Q70Z35 1606 aa11.08□□□□□ -0.64
ATF3-203ENST00000366981 PTPRKQ15262 1439 aa11.08□□□□□ -0.64
ATF3-203ENST00000366981 CROCC2H7BZ55 1655 aa11.07□□□□□ -0.64
ATF3-203ENST00000366981 HFM1A2PYH4 1435 aa11.05□□□□□ -0.64
ATF3-203ENST00000366981 PLEKHD1A6NEE1 506 aa11.05□□□□□ -0.64
ATF3-203ENST00000366981 SETD5Q9C0A6 1442 aa11.05□□□□□ -0.64
ATF3-203ENST00000366981 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.04□□□□□ -0.641e-6■■■■□ 23.9
ATF3-203ENST00000366981 MYO5CQ9NQX4 1742 aa11.04□□□□□ -0.64
ATF3-203ENST00000366981 TTC37Q6PGP7 1564 aa11.04□□□□□ -0.64
ATF3-203ENST00000366981 NPM1P06748 294 aaKnown RBP eCLIP11.04□□□□□ -0.64
ATF3-203ENST00000366981 FBXO41Q8TF61 875 aa11.04□□□□□ -0.64
ATF3-203ENST00000366981 ARAP3Q8WWN8 1544 aa11.04□□□□□ -0.64
ATF3-203ENST00000366981 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.03□□□□□ -0.64
ATF3-203ENST00000366981 CAMSAP2Q08AD1 1489 aa11.03□□□□□ -0.64
ATF3-203ENST00000366981 ADGBQ8N7X0 1667 aa11.03□□□□□ -0.64
ATF3-203ENST00000366981 CLSPNQ9HAW4 1339 aa11.03□□□□□ -0.64
ATF3-203ENST00000366981 ARHGEF5Q12774 1597 aa11.03□□□□□ -0.64
ATF3-203ENST00000366981 DHX57Q6P158 1386 aaKnown RBP11.03□□□□□ -0.64
ATF3-203ENST00000366981 PLCB2Q00722 1185 aa11.02□□□□□ -0.65
ATF3-203ENST00000366981 RAB3GAP2Q9H2M9 1393 aa11.02□□□□□ -0.65
ATF3-203ENST00000366981 DAPK1P53355 1430 aa11.01□□□□□ -0.65
ATF3-203ENST00000366981 ARID3CA6NKF2 412 aa11.01□□□□□ -0.65
ATF3-203ENST00000366981 FAM50AQ14320 339 aaKnown RBP11.01□□□□□ -0.65
ATF3-203ENST00000366981 ROCK1Q13464 1354 aa11.01□□□□□ -0.65
ATF3-203ENST00000366981 ABCC5O15440 1437 aa11.01□□□□□ -0.65
ATF3-203ENST00000366981 NAIPQ13075 1403 aa11.01□□□□□ -0.65
ATF3-203ENST00000366981 ADGRL2O95490 1459 aa11□□□□□ -0.65
ATF3-203ENST00000366981 SAMD9LQ8IVG5 1584 aa11□□□□□ -0.65
ATF3-203ENST00000366981 ABCA9Q8IUA7 1624 aa11□□□□□ -0.65
ATF3-203ENST00000366981 SHANK2Q9UPX8 1470 aa11□□□□□ -0.65
ATF3-203ENST00000366981 MBD5Q9P267 1494 aa10.99□□□□□ -0.65
ATF3-203ENST00000366981 WDR7Q9Y4E6 1490 aa10.99□□□□□ -0.65
ATF3-203ENST00000366981 MAST1Q9Y2H9 1570 aa10.98□□□□□ -0.65
ATF3-203ENST00000366981 CCER1Q8TC90 406 aaPredicted RBP10.97□□□□□ -0.65
ATF3-203ENST00000366981 PLCH2O75038 1416 aa10.96□□□□□ -0.65
ATF3-203ENST00000366981 GLI2P10070 1586 aa10.95□□□□□ -0.66
ATF3-203ENST00000366981 COL17A1Q9UMD9 1497 aaPredicted RBP10.95□□□□□ -0.66
ATF3-203ENST00000366981 KIAA1107Q9UPP5 1409 aa10.95□□□□□ -0.66
ATF3-203ENST00000366981 ZNF644Q9H582 1327 aaPredicted RBP10.95□□□□□ -0.66
ATF3-203ENST00000366981 CFDP1Q9UEE9 299 aaPredicted RBP10.95□□□□□ -0.66
ATF3-203ENST00000366981 PPRC1Q5VV67 1664 aaKnown RBP10.95□□□□□ -0.66
ATF3-203ENST00000366981 PLEKHH2Q8IVE3 1493 aa10.93□□□□□ -0.66
ATF3-203ENST00000366981 NCOA1Q15788 1441 aa10.93□□□□□ -0.66
ATF3-203ENST00000366981 ITGAEP38570 1179 aa10.93□□□□□ -0.66
ATF3-203ENST00000366981 TSPOAP1O95153 1857 aa10.93□□□□□ -0.66
ATF3-203ENST00000366981 ABCC1P33527 1531 aa10.93□□□□□ -0.66
ATF3-203ENST00000366981 ASXL2Q76L83 1435 aa10.92□□□□□ -0.66
ATF3-203ENST00000366981 ACIN1Q9UKV3 1341 aaKnown RBP10.92□□□□□ -0.66
ATF3-203ENST00000366981 PLXNC1O60486 1568 aa10.91□□□□□ -0.66
ATF3-203ENST00000366981 ARHGAP5Q13017 1502 aa10.91□□□□□ -0.66
ATF3-203ENST00000366981 RSPH4AQ5TD94 716 aa10.91□□□□□ -0.66
ATF3-203ENST00000366981 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.91□□□□□ -0.66
ATF3-203ENST00000366981 CCDC141Q6ZP82 1450 aa10.91□□□□□ -0.66
ATF3-203ENST00000366981 SYCP2Q9BX26 1530 aa10.9□□□□□ -0.66
ATF3-203ENST00000366981 ARHGEF12Q9NZN5 1544 aa10.9□□□□□ -0.66
ATF3-203ENST00000366981 DENND4BO75064 1496 aaPredicted RBP10.9□□□□□ -0.66
ATF3-203ENST00000366981 LMTK3Q96Q04 1460 aa10.88□□□□□ -0.67
ATF3-203ENST00000366981 C9orf84Q5VXU9 1444 aa10.88□□□□□ -0.67
ATF3-203ENST00000366981 BCANQ96GW7 911 aa10.88□□□□□ -0.67
ATF3-203ENST00000366981 KDM5DQ9BY66 1539 aa10.88□□□□□ -0.67
ATF3-203ENST00000366981 TEX14Q8IWB6 1497 aa10.87□□□□□ -0.67
ATF3-203ENST00000366981 CFAP74Q9C0B2 1584 aa10.86□□□□□ -0.67
ATF3-203ENST00000366981 MAP3K4Q9Y6R4 1608 aa10.86□□□□□ -0.67
ATF3-203ENST00000366981 ANKRD30AQ9BXX3 1397 aa10.86□□□□□ -0.67
ATF3-203ENST00000366981 INO80Q9ULG1 1556 aaPredicted RBP10.85□□□□□ -0.67
ATF3-203ENST00000366981 EFCAB2Q5VUJ9 269 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms