RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 KIF14Q15058 1648 aa21.07■□□□□ 0.96
PRKN-204ENST00000366896 NPM1P06748 294 aaKnown RBP eCLIP21.07■□□□□ 0.96
PRKN-204ENST00000366896 TSHZ2Q9NRE2 1034 aa21.04■□□□□ 0.96
PRKN-204ENST00000366896 ASXL2Q76L83 1435 aa21.03■□□□□ 0.96
PRKN-204ENST00000366896 WDR7Q9Y4E6 1490 aa21.03■□□□□ 0.96
PRKN-204ENST00000366896 SIN3AQ96ST3 1273 aa21■□□□□ 0.95
PRKN-204ENST00000366896 ABCC10Q5T3U5 1492 aa21■□□□□ 0.95
PRKN-204ENST00000366896 MYOM3Q5VTT5 1437 aa20.98■□□□□ 0.95
PRKN-204ENST00000366896 KCNH8Q96L42 1107 aa20.97■□□□□ 0.95
PRKN-204ENST00000366896 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.97■□□□□ 0.95
PRKN-204ENST00000366896 ANP32EQ9BTT0 268 aa20.96■□□□□ 0.95
PRKN-204ENST00000366896 TTC37Q6PGP7 1564 aa20.95■□□□□ 0.94
PRKN-204ENST00000366896 FGD6Q6ZV73 1430 aa20.94■□□□□ 0.94
PRKN-204ENST00000366896 GPATCH8Q9UKJ3 1502 aaKnown RBP20.94■□□□□ 0.94
PRKN-204ENST00000366896 CDC42BPAQ5VT25 1732 aa20.93■□□□□ 0.94
PRKN-204ENST00000366896 ITSN2Q9NZM3 1697 aa20.92■□□□□ 0.94
PRKN-204ENST00000366896 MIA2Q96PC5 1412 aa20.9■□□□□ 0.94
PRKN-204ENST00000366896 ABCA9Q8IUA7 1624 aa20.89■□□□□ 0.93
PRKN-204ENST00000366896 PREX2Q70Z35 1606 aa20.88■□□□□ 0.93
PRKN-204ENST00000366896 MYO5CQ9NQX4 1742 aa20.88■□□□□ 0.93
PRKN-204ENST00000366896 PTPN23Q9H3S7 1636 aa20.88■□□□□ 0.93
PRKN-204ENST00000366896 CDC42BPBQ9Y5S2 1711 aa20.86■□□□□ 0.93
PRKN-204ENST00000366896 TCOF1Q13428 1488 aaKnown RBP20.85■□□□□ 0.93
PRKN-204ENST00000366896 CFDP1Q9UEE9 299 aaPredicted RBP20.84■□□□□ 0.93
PRKN-204ENST00000366896 HFM1A2PYH4 1435 aa20.84■□□□□ 0.93
PRKN-204ENST00000366896 DDX10Q13206 875 aaKnown RBP20.83■□□□□ 0.93
PRKN-204ENST00000366896 PLCH2O75038 1416 aa20.83■□□□□ 0.92
PRKN-204ENST00000366896 PPP1R15AO75807 674 aaPredicted RBP20.82■□□□□ 0.92
PRKN-204ENST00000366896 PTPRKQ15262 1439 aa20.81■□□□□ 0.92
PRKN-204ENST00000366896 GLI2P10070 1586 aa20.81■□□□□ 0.92
PRKN-204ENST00000366896 DIP2BQ9P265 1576 aa20.81■□□□□ 0.92
PRKN-204ENST00000366896 ARHGAP5Q13017 1502 aa20.8■□□□□ 0.92
PRKN-204ENST00000366896 ARAP3Q8WWN8 1544 aa20.8■□□□□ 0.92
PRKN-204ENST00000366896 ZNF644Q9H582 1327 aaPredicted RBP20.79■□□□□ 0.92
PRKN-204ENST00000366896 CAMSAP2Q08AD1 1489 aa20.79■□□□□ 0.92
PRKN-204ENST00000366896 HIRIP3Q9BW71 556 aaPredicted RBP20.79■□□□□ 0.92
PRKN-204ENST00000366896 ZNF777Q9ULD5 760 aaPredicted RBP20.77■□□□□ 0.92
PRKN-204ENST00000366896 SAMD9LQ8IVG5 1584 aa20.77■□□□□ 0.91
PRKN-204ENST00000366896 MAP3K4Q9Y6R4 1608 aa20.76■□□□□ 0.91
PRKN-204ENST00000366896 CD109Q6YHK3 1445 aa20.76■□□□□ 0.91
PRKN-204ENST00000366896 FAM69CQ0P6D2 419 aa20.74■□□□□ 0.91
PRKN-204ENST00000366896 KIF13AQ9H1H9 1805 aa20.73■□□□□ 0.91
PRKN-204ENST00000366896 EFCAB2Q5VUJ9 269 aa20.73■□□□□ 0.91
PRKN-204ENST00000366896 NAIPQ13075 1403 aa20.71■□□□□ 0.91
PRKN-204ENST00000366896 CCER2I3L3R5 266 aa20.71■□□□□ 0.91
PRKN-204ENST00000366896 FANCAO15360 1455 aa20.71■□□□□ 0.91
PRKN-204ENST00000366896 DNMT1P26358 1616 aaKnown RBP20.71■□□□□ 0.91
PRKN-204ENST00000366896 TONSLQ96HA7 1378 aa20.69■□□□□ 0.9
PRKN-204ENST00000366896 PLEKHH2Q8IVE3 1493 aa20.68■□□□□ 0.9
PRKN-204ENST00000366896 ABCC1P33527 1531 aa20.68■□□□□ 0.9
PRKN-204ENST00000366896 DAPK1P53355 1430 aa20.67■□□□□ 0.9
PRKN-204ENST00000366896 AKNAQ7Z591 1439 aa20.67■□□□□ 0.9
PRKN-204ENST00000366896 SYCP2Q9BX26 1530 aa20.67■□□□□ 0.9
PRKN-204ENST00000366896 MBD5Q9P267 1494 aa20.67■□□□□ 0.9
PRKN-204ENST00000366896 ABCC5O15440 1437 aa20.67■□□□□ 0.9
PRKN-204ENST00000366896 KIAA1107Q9UPP5 1409 aa20.67■□□□□ 0.9
PRKN-204ENST00000366896 FKBP8Q14318 412 aa20.67■□□□□ 0.9
PRKN-204ENST00000366896 ARHGEF5Q12774 1597 aa20.66■□□□□ 0.9
PRKN-204ENST00000366896 CFAP74Q9C0B2 1584 aa20.66■□□□□ 0.9
PRKN-204ENST00000366896 BCANQ96GW7 911 aa20.66■□□□□ 0.9
PRKN-204ENST00000366896 BCL11AQ9H165 835 aa20.66■□□□□ 0.9
PRKN-204ENST00000366896 ARHGEF12Q9NZN5 1544 aa20.66■□□□□ 0.9
PRKN-204ENST00000366896 HNRNPMP52272 730 aaKnown RBP eCLIP20.65■□□□□ 0.9
PRKN-204ENST00000366896 PPRC1Q5VV67 1664 aaKnown RBP20.64■□□□□ 0.9
PRKN-204ENST00000366896 CROCC2H7BZ55 1655 aa20.64■□□□□ 0.89
PRKN-204ENST00000366896 TSPOAP1O95153 1857 aa20.63■□□□□ 0.89
PRKN-204ENST00000366896 NEO1Q92859 1461 aa20.62■□□□□ 0.89
PRKN-204ENST00000366896 ADGRL1O94910 1474 aa20.62■□□□□ 0.89
PRKN-204ENST00000366896 CCDC141Q6ZP82 1450 aa20.62■□□□□ 0.89
PRKN-204ENST00000366896 RSPH4AQ5TD94 716 aa20.6■□□□□ 0.89
PRKN-204ENST00000366896 GCC2Q8IWJ2 1684 aa20.59■□□□□ 0.89
PRKN-204ENST00000366896 SHANK2Q9UPX8 1470 aa20.59■□□□□ 0.89
PRKN-204ENST00000366896 SCAPERQ9BY12 1400 aa20.58■□□□□ 0.89
PRKN-204ENST00000366896 ANP32CO43423 234 aa20.58■□□□□ 0.89
PRKN-204ENST00000366896 TRAPPC8Q9Y2L5 1435 aa20.58■□□□□ 0.88
PRKN-204ENST00000366896 CHIC2Q9UKJ5 165 aa20.58■□□□□ 0.88
PRKN-204ENST00000366896 TEX14Q8IWB6 1497 aa20.57■□□□□ 0.88
PRKN-204ENST00000366896 RBM19Q9Y4C8 960 aaKnown RBP20.57■□□□□ 0.88
PRKN-204ENST00000366896 RRP7BPQ9NSQ0 103 aa20.56■□□□□ 0.88
PRKN-204ENST00000366896 ADGBQ8N7X0 1667 aa20.56■□□□□ 0.88
PRKN-204ENST00000366896 C9orf84Q5VXU9 1444 aa20.55■□□□□ 0.88
PRKN-204ENST00000366896 NEFLP07196 543 aa20.54■□□□□ 0.88
PRKN-204ENST00000366896 ROCK1Q13464 1354 aa20.54■□□□□ 0.88
PRKN-204ENST00000366896 ADGRL2O95490 1459 aa20.54■□□□□ 0.88
PRKN-204ENST00000366896 MAST1Q9Y2H9 1570 aa20.54■□□□□ 0.88
PRKN-204ENST00000366896 DENND4BO75064 1496 aaPredicted RBP20.54■□□□□ 0.88
PRKN-204ENST00000366896 TSPY4P0CV99 314 aa20.54■□□□□ 0.88
PRKN-204ENST00000366896 TSPY10P0CW01 314 aa20.54■□□□□ 0.88
PRKN-204ENST00000366896 KDM6BO15054 1643 aa20.53■□□□□ 0.88
PRKN-204ENST00000366896 TRIM52Q96A61 297 aa20.53■□□□□ 0.88
PRKN-204ENST00000366896 TRHP20396 242 aaPredicted RBP20.52■□□□□ 0.88
PRKN-204ENST00000366896 AFAP1Q8N556 730 aa20.52■□□□□ 0.87
PRKN-204ENST00000366896 POGZQ7Z3K3 1410 aa20.51■□□□□ 0.87
PRKN-204ENST00000366896 NCOA1Q15788 1441 aa20.5■□□□□ 0.87
PRKN-204ENST00000366896 ZNF518AQ6AHZ1 1483 aa20.5■□□□□ 0.87
PRKN-204ENST00000366896 ANKRD30AQ9BXX3 1397 aa20.48■□□□□ 0.87
PRKN-204ENST00000366896 KDM5CP41229 1560 aa20.48■□□□□ 0.87
PRKN-204ENST00000366896 RICTORQ6R327 1708 aa20.47■□□□□ 0.87
PRKN-204ENST00000366896 INO80Q9ULG1 1556 aaPredicted RBP20.46■□□□□ 0.87
PRKN-204ENST00000366896 ZFYVE16Q7Z3T8 1539 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms