RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 PCF11O94913 1555 aaKnown RBP20.48■□□□□ 0.87
MRPL55-209ENST00000366735 ARHGAP35Q9NRY4 1499 aa20.45■□□□□ 0.86
MRPL55-209ENST00000366735 CDK11AQ9UQ88 783 aaPredicted RBP20.45■□□□□ 0.86
MRPL55-209ENST00000366735 PLCH2O75038 1416 aa20.44■□□□□ 0.86
MRPL55-209ENST00000366735 LRRIQ1Q96JM4 1722 aa20.44■□□□□ 0.86
MRPL55-209ENST00000366735 EHMT2Q96KQ7 1210 aa20.43■□□□□ 0.86
MRPL55-209ENST00000366735 CLIP1P30622 1438 aa20.43■□□□□ 0.86
MRPL55-209ENST00000366735 SIGLEC1Q9BZZ2 1709 aa20.41■□□□□ 0.86
MRPL55-209ENST00000366735 ATP1B4Q9UN42 357 aaPredicted RBP20.41■□□□□ 0.86
MRPL55-209ENST00000366735 SCAPERQ9BY12 1400 aa20.4■□□□□ 0.86
MRPL55-209ENST00000366735 LMTK3Q96Q04 1460 aa20.39■□□□□ 0.85
MRPL55-209ENST00000366735 ARHGAP5Q13017 1502 aa20.38■□□□□ 0.85
MRPL55-209ENST00000366735 YEATS2Q9ULM3 1422 aa20.38■□□□□ 0.85
MRPL55-209ENST00000366735 TROQ12816 1431 aaPredicted RBP20.37■□□□□ 0.85
MRPL55-209ENST00000366735 ZNF518AQ6AHZ1 1483 aa20.37■□□□□ 0.85
MRPL55-209ENST00000366735 EFCAB2Q5VUJ9 269 aa20.36■□□□□ 0.85
MRPL55-209ENST00000366735 CCDC18Q5T9S5 1454 aa20.36■□□□□ 0.85
MRPL55-209ENST00000366735 CDC42BPBQ9Y5S2 1711 aa20.36■□□□□ 0.85
MRPL55-209ENST00000366735 C9orf84Q5VXU9 1444 aa20.36■□□□□ 0.85
MRPL55-209ENST00000366735 PREX2Q70Z35 1606 aa20.35■□□□□ 0.85
MRPL55-209ENST00000366735 KDM5CP41229 1560 aa20.34■□□□□ 0.85
MRPL55-209ENST00000366735 PREX1Q8TCU6 1659 aa20.34■□□□□ 0.85
MRPL55-209ENST00000366735 ATP10AO60312 1499 aa20.33■□□□□ 0.85
MRPL55-209ENST00000366735 ARHGEF12Q9NZN5 1544 aa20.31■□□□□ 0.84
MRPL55-209ENST00000366735 ITSN2Q9NZM3 1697 aa20.3■□□□□ 0.84
MRPL55-209ENST00000366735 REREQ9P2R6 1566 aa20.29■□□□□ 0.84
MRPL55-209ENST00000366735 CDC42BPAQ5VT25 1732 aa20.28■□□□□ 0.84
MRPL55-209ENST00000366735 FBXO41Q8TF61 875 aa20.27■□□□□ 0.84
MRPL55-209ENST00000366735 CASKIN1Q8WXD9 1431 aa20.27■□□□□ 0.83
MRPL55-209ENST00000366735 DIP2CQ9Y2E4 1556 aa20.26■□□□□ 0.83
MRPL55-209ENST00000366735 ABCC1P33527 1531 aa20.26■□□□□ 0.83
MRPL55-209ENST00000366735 FYCO1Q9BQS8 1478 aa20.25■□□□□ 0.83
MRPL55-209ENST00000366735 MLECQ14165 292 aa20.25■□□□□ 0.83
MRPL55-209ENST00000366735 ABCA6Q8N139 1617 aa20.24■□□□□ 0.83
MRPL55-209ENST00000366735 SETD1BQ9UPS6 1966 aaKnown RBP20.23■□□□□ 0.83
MRPL55-209ENST00000366735 KCNA4P22459 653 aa20.23■□□□□ 0.83
MRPL55-209ENST00000366735 MYT1LQ9UL68 1186 aa20.23■□□□□ 0.83
MRPL55-209ENST00000366735 ADRA2BP18089 450 aa20.22■□□□□ 0.83
MRPL55-209ENST00000366735 MLH3Q9UHC1 1453 aa20.2■□□□□ 0.82
MRPL55-209ENST00000366735 C3P01024 1663 aa20.18■□□□□ 0.82
MRPL55-209ENST00000366735 KIDINS220Q9ULH0 1771 aa20.18■□□□□ 0.82
MRPL55-209ENST00000366735 AGLP35573 1532 aa20.17■□□□□ 0.82
MRPL55-209ENST00000366735 HSPA2P54652 639 aa20.16■□□□□ 0.82
MRPL55-209ENST00000366735 UHRF1BP1Q6BDS2 1440 aa20.14■□□□□ 0.81
MRPL55-209ENST00000366735 AFAP1Q8N556 730 aa20.14■□□□□ 0.81
MRPL55-209ENST00000366735 MROH2AA6NES4 1674 aa20.12■□□□□ 0.81
MRPL55-209ENST00000366735 SAMD9LQ8IVG5 1584 aa20.12■□□□□ 0.81
MRPL55-209ENST00000366735 ESF1Q9H501 851 aaKnown RBP20.11■□□□□ 0.81
MRPL55-209ENST00000366735 TRAPPC8Q9Y2L5 1435 aa20.1■□□□□ 0.81
MRPL55-209ENST00000366735 SYCP2Q9BX26 1530 aa20.1■□□□□ 0.81
MRPL55-209ENST00000366735 STRCQ7RTU9 1775 aa20.1■□□□□ 0.81
MRPL55-209ENST00000366735 CNTLNQ9NXG0 1405 aa20.09■□□□□ 0.81
MRPL55-209ENST00000366735 SUPT6HQ7KZ85 1726 aaKnown RBP20.08■□□□□ 0.81
MRPL55-209ENST00000366735 PLEKHH2Q8IVE3 1493 aa20.08■□□□□ 0.81
MRPL55-209ENST00000366735 INO80Q9ULG1 1556 aaPredicted RBP20.05■□□□□ 0.8
MRPL55-209ENST00000366735 DMRT2Q9Y5R5 561 aa20.05■□□□□ 0.8
MRPL55-209ENST00000366735 ADGBQ8N7X0 1667 aa20.05■□□□□ 0.8
MRPL55-209ENST00000366735 ATP7AQ04656 1500 aa20.05■□□□□ 0.8
MRPL55-209ENST00000366735 GPATCH8Q9UKJ3 1502 aaKnown RBP20.04■□□□□ 0.8
MRPL55-209ENST00000366735 CEBPAP49715 358 aaPredicted RBP20.04■□□□□ 0.8
MRPL55-209ENST00000366735 EHBP1L1Q8N3D4 1523 aa20.02■□□□□ 0.8
MRPL55-209ENST00000366735 MTUS2Q5JR59 1369 aa20.01■□□□□ 0.79
MRPL55-209ENST00000366735 ZNF777Q9ULD5 760 aaPredicted RBP20.01■□□□□ 0.79
MRPL55-209ENST00000366735 KIAA1107Q9UPP5 1409 aa20.01■□□□□ 0.79
MRPL55-209ENST00000366735 CLTCQ00610 1675 aaKnown RBP20■□□□□ 0.79
MRPL55-209ENST00000366735 CCNB3Q8WWL7 1395 aa20■□□□□ 0.79
MRPL55-209ENST00000366735 CERKQ8TCT0 537 aa20■□□□□ 0.79
MRPL55-209ENST00000366735 SPAG9O60271 1321 aaKnown RBP20■□□□□ 0.79
MRPL55-209ENST00000366735 PLXNC1O60486 1568 aa20■□□□□ 0.79
MRPL55-209ENST00000366735 TIAM1Q13009 1591 aa19.98■□□□□ 0.79
MRPL55-209ENST00000366735 ZNF142P52746 1687 aaPredicted RBP19.97■□□□□ 0.79
MRPL55-209ENST00000366735 NPATQ14207 1427 aa19.96■□□□□ 0.79
MRPL55-209ENST00000366735 CFDP1Q9UEE9 299 aaPredicted RBP19.96■□□□□ 0.79
MRPL55-209ENST00000366735 PTPRTO14522 1441 aa19.95■□□□□ 0.78
MRPL55-209ENST00000366735 A2MP01023 1474 aa19.94■□□□□ 0.78
MRPL55-209ENST00000366735 MYO3AQ8NEV4 1616 aa19.94■□□□□ 0.78
MRPL55-209ENST00000366735 HNRNPMP52272 730 aaKnown RBP eCLIP19.91■□□□□ 0.78
MRPL55-209ENST00000366735 NCOA1Q15788 1441 aa19.9■□□□□ 0.78
MRPL55-209ENST00000366735 CAMSAP1Q5T5Y3 1602 aa19.9■□□□□ 0.78
MRPL55-209ENST00000366735 CEP162Q5TB80 1403 aa19.89■□□□□ 0.77
MRPL55-209ENST00000366735 ZMYM3Q14202 1370 aa19.87■□□□□ 0.77
MRPL55-209ENST00000366735 CEP170BQ9Y4F5 1589 aaPredicted RBP19.87■□□□□ 0.77
MRPL55-209ENST00000366735 IQSEC2Q5JU85 1478 aa19.86■□□□□ 0.77
MRPL55-209ENST00000366735 RTEL1-TNFRSF6BF6WH68 1400 aa19.85■□□□□ 0.77
MRPL55-209ENST00000366735 FAM135AQ9P2D6 1515 aa19.85■□□□□ 0.77
MRPL55-209ENST00000366735 PPP6R1Q9UPN7 881 aa19.83■□□□□ 0.77
MRPL55-209ENST00000366735 CCDC141Q6ZP82 1450 aa19.83■□□□□ 0.76
MRPL55-209ENST00000366735 PLA2R1Q13018 1463 aa19.82■□□□□ 0.76
MRPL55-209ENST00000366735 POLR1AO95602 1720 aaPredicted RBP19.82■□□□□ 0.76
MRPL55-209ENST00000366735 MBD5Q9P267 1494 aa19.81■□□□□ 0.76
MRPL55-209ENST00000366735 LTBP4Q8N2S1 1624 aa19.81■□□□□ 0.76
MRPL55-209ENST00000366735 CAMSAP2Q08AD1 1489 aa19.8■□□□□ 0.76
MRPL55-209ENST00000366735 GGT6Q6P531 493 aa19.8■□□□□ 0.76
MRPL55-209ENST00000366735 NCOA2Q15596 1464 aa19.79■□□□□ 0.76
MRPL55-209ENST00000366735 PTPRKQ15262 1439 aa19.79■□□□□ 0.76
MRPL55-209ENST00000366735 KDM5DQ9BY66 1539 aa19.78■□□□□ 0.76
MRPL55-209ENST00000366735 ARHGEF5Q12774 1597 aa19.78■□□□□ 0.76
MRPL55-209ENST00000366735 DHX29Q7Z478 1369 aaKnown RBP19.75■□□□□ 0.75
MRPL55-209ENST00000366735 PKD2Q13563 968 aa19.75■□□□□ 0.75
MRPL55-209ENST00000366735 RSPH4AQ5TD94 716 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms