RNA–Protein interactions for RNA: ENST00000364872.1

RNU6-563P-201, Transcript of RNA, U6 small nuclear 563, pseudogene, humanhuman

BASIC

Gene RNU6-563P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-563P-201ENST00000364872 LSM11P83369 360 aaKnown RBP eCLIP0.76□□□□□ -2.29
RNU6-563P-201ENST00000364872 HNRNPUL2Q1KMD3 747 aaKnown RBP0.76□□□□□ -2.29
RNU6-563P-201ENST00000364872 GSC2O15499 205 aa0.75□□□□□ -2.29
RNU6-563P-201ENST00000364872 IER5LQ5T953 404 aa0.75□□□□□ -2.29
RNU6-563P-201ENST00000364872 ZNF710Q8N1W2 664 aa0.75□□□□□ -2.29
RNU6-563P-201ENST00000364872 GALNT6Q8NCL4 622 aa0.75□□□□□ -2.29
RNU6-563P-201ENST00000364872 IGHA2P01877 340 aa0.74□□□□□ -2.29
RNU6-563P-201ENST00000364872 HOXB1P14653 301 aaPredicted RBP0.74□□□□□ -2.29
RNU6-563P-201ENST00000364872 PKDCCQ504Y2 493 aa0.74□□□□□ -2.29
RNU6-563P-201ENST00000364872 PLPPR3Q6T4P5 718 aa0.74□□□□□ -2.29
RNU6-563P-201ENST00000364872 KRTAP5-2Q701N4 177 aa0.74□□□□□ -2.29
RNU6-563P-201ENST00000364872 NBPF11Q86T75 865 aa0.74□□□□□ -2.29
RNU6-563P-201ENST00000364872 MS4A3Q96HJ5 214 aa0.74□□□□□ -2.29
RNU6-563P-201ENST00000364872 PDZRN3Q9UPQ7 1066 aa0.74□□□□□ -2.29
RNU6-563P-201ENST00000364872 TERTO14746 1132 aaKnown RBP0.73□□□□□ -2.29
RNU6-563P-201ENST00000364872 SLC16A10Q8TF71 515 aa0.73□□□□□ -2.29
RNU6-563P-201ENST00000364872 CSRNP1Q96S65 589 aa0.73□□□□□ -2.29
RNU6-563P-201ENST00000364872 KRTAP5-8O75690 187 aa0.72□□□□□ -2.29
RNU6-563P-201ENST00000364872 PLCG2P16885 1265 aa0.72□□□□□ -2.29
RNU6-563P-201ENST00000364872 SCO2A0A1W2PP80 73 aa0.71□□□□□ -2.3
RNU6-563P-201ENST00000364872 C11orf95C9JLR9 678 aaPredicted RBP0.71□□□□□ -2.3
RNU6-563P-201ENST00000364872 MYT1Q01538 1121 aa0.71□□□□□ -2.3
RNU6-563P-201ENST00000364872 WBP1LQ9NX94 342 aa0.71□□□□□ -2.3
RNU6-563P-201ENST00000364872 OBSCNQ5VST9 7968 aa0.7□□□□□ -2.3
RNU6-563P-201ENST00000364872 SERINC4A6NH21 518 aa0.7□□□□□ -2.3
RNU6-563P-201ENST00000364872 RIMBP2O15034 1052 aa0.7□□□□□ -2.3
RNU6-563P-201ENST00000364872 DGAT1O75907 488 aa0.7□□□□□ -2.3
RNU6-563P-201ENST00000364872 PTPN5P54829 565 aa0.7□□□□□ -2.3
RNU6-563P-201ENST00000364872 KRTAP5-11Q6L8G4 156 aa0.7□□□□□ -2.3
RNU6-563P-201ENST00000364872 KANK3Q6NY19 840 aa0.7□□□□□ -2.3
RNU6-563P-201ENST00000364872 C3orf67Q6ZVT6 689 aa0.7□□□□□ -2.3
RNU6-563P-201ENST00000364872 CNKSR2Q8WXI2 1034 aa0.7□□□□□ -2.3
RNU6-563P-201ENST00000364872 STAC3Q96MF2 364 aa0.7□□□□□ -2.3
RNU6-563P-201ENST00000364872 LCE4AQ5TA78 99 aa0.69□□□□□ -2.3
RNU6-563P-201ENST00000364872 DPY19L2Q6NUT2 758 aa0.69□□□□□ -2.3
RNU6-563P-201ENST00000364872 SPOCK3Q9BQ16 436 aa0.69□□□□□ -2.3
RNU6-563P-201ENST00000364872 ONECUT2O95948 504 aa0.68□□□□□ -2.3
RNU6-563P-201ENST00000364872 COL9A1P20849 921 aa0.68□□□□□ -2.3
RNU6-563P-201ENST00000364872 GMPRP36959 345 aa0.68□□□□□ -2.3
RNU6-563P-201ENST00000364872 PBX2P40425 430 aa0.68□□□□□ -2.3
RNU6-563P-201ENST00000364872 JAG1P78504 1218 aa0.68□□□□□ -2.3
RNU6-563P-201ENST00000364872 ZMYM1Q5SVZ6 1142 aa0.68□□□□□ -2.3
RNU6-563P-201ENST00000364872 SAMD1Q6SPF0 538 aaPredicted RBP0.68□□□□□ -2.3
RNU6-563P-201ENST00000364872 IRF7Q92985 503 aa0.68□□□□□ -2.3
RNU6-563P-201ENST00000364872 FMNL2Q96PY5 1086 aa0.68□□□□□ -2.3
RNU6-563P-201ENST00000364872 PRKD2Q9BZL6 878 aa0.68□□□□□ -2.3
RNU6-563P-201ENST00000364872 BMP2KQ9NSY1 1161 aaPredicted RBP0.68□□□□□ -2.3
RNU6-563P-201ENST00000364872 SPDYE2BA6NHP3 402 aa0.67□□□□□ -2.3
RNU6-563P-201ENST00000364872 SPDYE6P0CI01 402 aa0.67□□□□□ -2.3
RNU6-563P-201ENST00000364872 TIE1P35590 1138 aa0.67□□□□□ -2.3
RNU6-563P-201ENST00000364872 DOK7Q18PE1 504 aa0.67□□□□□ -2.3
RNU6-563P-201ENST00000364872 SPDYE2Q495Y8 402 aa0.67□□□□□ -2.3
RNU6-563P-201ENST00000364872 LCE2CQ5TA81 110 aa0.67□□□□□ -2.3
RNU6-563P-201ENST00000364872 MCTP1Q6DN14 999 aa0.67□□□□□ -2.3
RNU6-563P-201ENST00000364872 ZFP64Q9NPA5 681 aa0.67□□□□□ -2.3
RNU6-563P-201ENST00000364872 JAG2Q9Y219 1238 aa0.67□□□□□ -2.3
RNU6-563P-201ENST00000364872 V9GY48 417 aaPredicted RBP0.67□□□□□ -2.3
RNU6-563P-201ENST00000364872 IRS1P35568 1242 aa0.66□□□□□ -2.3
RNU6-563P-201ENST00000364872 KRTAP10-7P60409 375 aaPredicted RBP0.66□□□□□ -2.3
RNU6-563P-201ENST00000364872 ITGBL1O95965 494 aaPredicted RBP0.65□□□□□ -2.31
RNU6-563P-201ENST00000364872 KRTAP4-3Q9BYR4 195 aa0.65□□□□□ -2.31
RNU6-563P-201ENST00000364872 NCANO14594 1321 aa0.64□□□□□ -2.31
RNU6-563P-201ENST00000364872 PRRG2O14669 202 aa0.64□□□□□ -2.31
RNU6-563P-201ENST00000364872 ADGRD1Q6QNK2 874 aa0.64□□□□□ -2.31
RNU6-563P-201ENST00000364872 ZNF865P0CJ78 1059 aaPredicted RBP0.63□□□□□ -2.31
RNU6-563P-201ENST00000364872 PLA2G4EQ3MJ16 856 aa0.63□□□□□ -2.31
RNU6-563P-201ENST00000364872 ARTNQ5T4W7 220 aa0.63□□□□□ -2.31
RNU6-563P-201ENST00000364872 TRIM35Q9UPQ4 493 aa0.63□□□□□ -2.31
RNU6-563P-201ENST00000364872 PROCP04070 461 aa0.62□□□□□ -2.31
RNU6-563P-201ENST00000364872 BAG6P46379 1132 aa0.62□□□□□ -2.31
RNU6-563P-201ENST00000364872 FBLN7Q53RD9 439 aa0.62□□□□□ -2.31
RNU6-563P-201ENST00000364872 NTN5Q8WTR8 489 aaPredicted RBP0.62□□□□□ -2.31
RNU6-563P-201ENST00000364872 AAASQ9NRG9 546 aa0.62□□□□□ -2.31
RNU6-563P-201ENST00000364872 GMPR2Q9P2T1 348 aaKnown RBP0.62□□□□□ -2.31
RNU6-563P-201ENST00000364872 FAM187AA6NFU0 413 aa0.61□□□□□ -2.31
RNU6-563P-201ENST00000364872 TTLL13PA6NNM8 815 aa0.61□□□□□ -2.31
RNU6-563P-201ENST00000364872 B8ZZF3 427 aa0.61□□□□□ -2.31
RNU6-563P-201ENST00000364872 ST8SIA5O15466 376 aa0.61□□□□□ -2.31
RNU6-563P-201ENST00000364872 SUV39H1O43463 412 aa0.61□□□□□ -2.31
RNU6-563P-201ENST00000364872 FURINP09958 794 aa0.61□□□□□ -2.31
RNU6-563P-201ENST00000364872 KCNC4Q03721 635 aa0.61□□□□□ -2.31
RNU6-563P-201ENST00000364872 NPAS3Q8IXF0 933 aa0.61□□□□□ -2.31
RNU6-563P-201ENST00000364872 EMID1Q96A84 441 aaPredicted RBP0.61□□□□□ -2.31
RNU6-563P-201ENST00000364872 SCARF2Q96GP6 870 aaPredicted RBP0.61□□□□□ -2.31
RNU6-563P-201ENST00000364872 ADAMTS8Q9UP79 889 aa0.61□□□□□ -2.31
RNU6-563P-201ENST00000364872 HOXB3P14651 431 aaPredicted RBP0.6□□□□□ -2.31
RNU6-563P-201ENST00000364872 NAF1Q96HR8 494 aaKnown RBP0.6□□□□□ -2.31
RNU6-563P-201ENST00000364872 OCEL1Q9H607 264 aa0.6□□□□□ -2.31
RNU6-563P-201ENST00000364872 ZSWIM6Q9HCJ5 1215 aa0.6□□□□□ -2.31
RNU6-563P-201ENST00000364872 RNF114Q9Y508 228 aa0.6□□□□□ -2.31
RNU6-563P-201ENST00000364872 COL17A1Q9UMD9 1497 aaPredicted RBP0.6□□□□□ -2.31
RNU6-563P-201ENST00000364872 KRTAP9-7A8MTY7 169 aa0.59□□□□□ -2.31
RNU6-563P-201ENST00000364872 OVOL3O00110 214 aa0.59□□□□□ -2.31
RNU6-563P-201ENST00000364872 TK2O00142 265 aa0.59□□□□□ -2.31
RNU6-563P-201ENST00000364872 MARSP56192 900 aaKnown RBP0.59□□□□□ -2.31
RNU6-563P-201ENST00000364872 KRTAP10-9P60411 292 aa0.59□□□□□ -2.31
RNU6-563P-201ENST00000364872 NXF1Q9UBU9 619 aaKnown RBP0.59□□□□□ -2.31
RNU6-563P-201ENST00000364872 TRPC6Q9Y210 931 aa0.59□□□□□ -2.31
RNU6-563P-201ENST00000364872 AMHP03971 560 aa0.58□□□□□ -2.32
RNU6-563P-201ENST00000364872 THSD4Q6ZMP0 1018 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms