RNA–Protein interactions for RNA: ENST00000362700.1

RNU6-228P-201, Transcript of RNA, U6 small nuclear 228, pseudogene, humanhuman

BASIC

Gene RNU6-228P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-228P-201ENST00000362700 ILDR1Q86SU0 546 aaPredicted RBP5.55□□□□□ -1.52
RNU6-228P-201ENST00000362700 TK2O00142 265 aa5.54□□□□□ -1.52
RNU6-228P-201ENST00000362700 SUZ12Q15022 739 aaKnown RBP5.54□□□□□ -1.52
RNU6-228P-201ENST00000362700 HRO43593 1189 aa5.53□□□□□ -1.52
RNU6-228P-201ENST00000362700 NUBP1P53384 320 aa5.53□□□□□ -1.52
RNU6-228P-201ENST00000362700 NRG2O14511 850 aaPredicted RBP5.51□□□□□ -1.53
RNU6-228P-201ENST00000362700 ARHGAP33O14559 1287 aa5.51□□□□□ -1.53
RNU6-228P-201ENST00000362700 KHSRPQ92945 711 aaKnown RBP eCLIP5.51□□□□□ -1.53
RNU6-228P-201ENST00000362700 PYGBP11216 843 aa5.5□□□□□ -1.53
RNU6-228P-201ENST00000362700 ZBTB47Q9UFB7 747 aaPredicted RBP5.5□□□□□ -1.53
RNU6-228P-201ENST00000362700 TREML4Q6UXN2 200 aa5.48□□□□□ -1.53
RNU6-228P-201ENST00000362700 ZNF467Q7Z7K2 595 aaPredicted RBP5.44□□□□□ -1.54
RNU6-228P-201ENST00000362700 PLCD3Q8N3E9 789 aa5.44□□□□□ -1.54
RNU6-228P-201ENST00000362700 LHX6Q9UPM6 363 aa5.43□□□□□ -1.54
RNU6-228P-201ENST00000362700 NUDT7P0C024 238 aa5.42□□□□□ -1.54
RNU6-228P-201ENST00000362700 TMEM92Q6UXU6 159 aa5.42□□□□□ -1.54
RNU6-228P-201ENST00000362700 THSD4Q6ZMP0 1018 aa5.42□□□□□ -1.54
RNU6-228P-201ENST00000362700 LCE2AQ5TA79 106 aaPredicted RBP5.41□□□□□ -1.54
RNU6-228P-201ENST00000362700 ITGBL1O95965 494 aaPredicted RBP5.4□□□□□ -1.54
RNU6-228P-201ENST00000362700 PSEN1P49768 467 aa5.4□□□□□ -1.54
RNU6-228P-201ENST00000362700 INSM1Q01101 510 aaPredicted RBP5.4□□□□□ -1.54
RNU6-228P-201ENST00000362700 DMRTA1Q5VZB9 504 aa5.4□□□□□ -1.54
RNU6-228P-201ENST00000362700 EHMT2Q96KQ7 1210 aa5.39□□□□□ -1.55
RNU6-228P-201ENST00000362700 PSDA5PKW4 1024 aaPredicted RBP5.36□□□□□ -1.55
RNU6-228P-201ENST00000362700 PSEN2P49810 448 aa5.36□□□□□ -1.55
RNU6-228P-201ENST00000362700 GOLGA8CPA6NN73 597 aa5.35□□□□□ -1.55
RNU6-228P-201ENST00000362700 MICALL2Q8IY33 904 aa5.35□□□□□ -1.55
RNU6-228P-201ENST00000362700 CABP2Q9NPB3 220 aa5.35□□□□□ -1.55
RNU6-228P-201ENST00000362700 WNT2BQ93097 391 aa5.33□□□□□ -1.56
RNU6-228P-201ENST00000362700 PROM2Q8N271 834 aa5.32□□□□□ -1.56
RNU6-228P-201ENST00000362700 KCNH8Q96L42 1107 aa5.31□□□□□ -1.56
RNU6-228P-201ENST00000362700 FAM181BA6NEQ2 426 aa5.3□□□□□ -1.56
RNU6-228P-201ENST00000362700 WFS1O76024 890 aa5.3□□□□□ -1.56
RNU6-228P-201ENST00000362700 KCNC4Q03721 635 aa5.3□□□□□ -1.56
RNU6-228P-201ENST00000362700 PDZRN3Q9UPQ7 1066 aa5.3□□□□□ -1.56
RNU6-228P-201ENST00000362700 WIPF1O43516 503 aa5.29□□□□□ -1.56
RNU6-228P-201ENST00000362700 PRKD2Q9BZL6 878 aa5.29□□□□□ -1.56
RNU6-228P-201ENST00000362700 POTECB2RU33 542 aa5.28□□□□□ -1.56
RNU6-228P-201ENST00000362700 PDAP1Q13442 181 aaKnown RBP5.28□□□□□ -1.56
RNU6-228P-201ENST00000362700 KRTAP4-8Q9BYQ9 185 aa5.27□□□□□ -1.57
RNU6-228P-201ENST00000362700 VPS9D1Q9Y2B5 631 aa5.27□□□□□ -1.57
RNU6-228P-201ENST00000362700 PCDHGA4Q9Y5G9 962 aa5.26□□□□□ -1.57
RNU6-228P-201ENST00000362700 V9GY48 417 aaPredicted RBP5.24□□□□□ -1.57
RNU6-228P-201ENST00000362700 MRPL50Q8N5N7 158 aaKnown RBP5.23□□□□□ -1.57
RNU6-228P-201ENST00000362700 KCNK17Q96T54 332 aa5.23□□□□□ -1.57
RNU6-228P-201ENST00000362700 ANO8Q9HCE9 1232 aaPredicted RBP5.23□□□□□ -1.57
RNU6-228P-201ENST00000362700 PPP4R3BQ5MIZ7 849 aa5.22□□□□□ -1.57
RNU6-228P-201ENST00000362700 XP32Q5T750 250 aa5.21□□□□□ -1.58
RNU6-228P-201ENST00000362700 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.2□□□□□ -1.58
RNU6-228P-201ENST00000362700 MYT1Q01538 1121 aa5.19□□□□□ -1.58
RNU6-228P-201ENST00000362700 PKDCCQ504Y2 493 aa5.19□□□□□ -1.58
RNU6-228P-201ENST00000362700 KRTAP1-3Q8IUG1 177 aa5.19□□□□□ -1.58
RNU6-228P-201ENST00000362700 BHMG1C9JSJ3 638 aaPredicted RBP5.18□□□□□ -1.58
RNU6-228P-201ENST00000362700 SLC34A2O95436 690 aa5.18□□□□□ -1.58
RNU6-228P-201ENST00000362700 NYAP1Q6ZVC0 841 aa5.18□□□□□ -1.58
RNU6-228P-201ENST00000362700 KRTAP9-2Q9BYQ4 174 aa5.18□□□□□ -1.58
RNU6-228P-201ENST00000362700 SLC4A5Q9BY07 1137 aa5.17□□□□□ -1.58
RNU6-228P-201ENST00000362700 KRTAP9-6A0A140TA67 174 aa5.16□□□□□ -1.58
RNU6-228P-201ENST00000362700 CHRM1P11229 460 aaPredicted RBP5.16□□□□□ -1.58
RNU6-228P-201ENST00000362700 NFX1Q12986 1120 aaKnown RBP5.15□□□□□ -1.59
RNU6-228P-201ENST00000362700 GSE1Q14687 1217 aa5.15□□□□□ -1.59
RNU6-228P-201ENST00000362700 NBPF3Q9H094 633 aa5.15□□□□□ -1.59
RNU6-228P-201ENST00000362700 DGAT1O75907 488 aa5.14□□□□□ -1.59
RNU6-228P-201ENST00000362700 EFCAB3Q8N7B9 438 aa5.14□□□□□ -1.59
RNU6-228P-201ENST00000362700 ANKK1Q8NFD2 765 aa5.14□□□□□ -1.59
RNU6-228P-201ENST00000362700 PSMG3-AS1Q96PY0 264 aa5.14□□□□□ -1.59
RNU6-228P-201ENST00000362700 KCTD17Q8N5Z5 321 aa5.09□□□□□ -1.59
RNU6-228P-201ENST00000362700 BCAMP50895 628 aa5.08□□□□□ -1.6
RNU6-228P-201ENST00000362700 KDM4FA0A1W2PPD8 638 aa5.07□□□□□ -1.6
RNU6-228P-201ENST00000362700 C2orf72A6NCS6 295 aa5.07□□□□□ -1.6
RNU6-228P-201ENST00000362700 KIF3CO14782 793 aa5.05□□□□□ -1.6
RNU6-228P-201ENST00000362700 PPP1R18Q6NYC8 613 aa5.05□□□□□ -1.6
RNU6-228P-201ENST00000362700 ZSCAN1Q8NBB4 408 aa5.05□□□□□ -1.6
RNU6-228P-201ENST00000362700 WBP1LQ9NX94 342 aa5.05□□□□□ -1.6
RNU6-228P-201ENST00000362700 SOWAHBA6NEL2 793 aa5.04□□□□□ -1.6
RNU6-228P-201ENST00000362700 MS4A4AQ96JQ5 239 aa5.04□□□□□ -1.6
RNU6-228P-201ENST00000362700 ZBED2Q9BTP6 218 aa5.04□□□□□ -1.6
RNU6-228P-201ENST00000362700 C11orf95C9JLR9 678 aaPredicted RBP5.03□□□□□ -1.6
RNU6-228P-201ENST00000362700 SOX12O15370 315 aa5.03□□□□□ -1.6
RNU6-228P-201ENST00000362700 ST8SIA5O15466 376 aa5.03□□□□□ -1.6
RNU6-228P-201ENST00000362700 LCE3BQ5TA77 95 aa5.03□□□□□ -1.6
RNU6-228P-201ENST00000362700 FAM187AA6NFU0 413 aa5.02□□□□□ -1.61
RNU6-228P-201ENST00000362700 BTBD11A6QL63 1104 aa5.02□□□□□ -1.61
RNU6-228P-201ENST00000362700 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.02□□□□□ -1.61
RNU6-228P-201ENST00000362700 TRIM67Q6ZTA4 783 aa5.01□□□□□ -1.61
RNU6-228P-201ENST00000362700 AAASQ9NRG9 546 aa5.01□□□□□ -1.61
RNU6-228P-201ENST00000362700 PTPREP23469 700 aa5□□□□□ -1.61
RNU6-228P-201ENST00000362700 LCE2CQ5TA81 110 aa5□□□□□ -1.61
RNU6-228P-201ENST00000362700 BCL2L12Q9HB09 334 aa5□□□□□ -1.61
RNU6-228P-201ENST00000362700 TERTO14746 1132 aaKnown RBP4.99□□□□□ -1.61
RNU6-228P-201ENST00000362700 PTCD2Q8WV60 388 aaKnown RBP4.98□□□□□ -1.61
RNU6-228P-201ENST00000362700 PRR20EP86478 221 aa4.96□□□□□ -1.62
RNU6-228P-201ENST00000362700 PRR20CP86479 221 aa4.96□□□□□ -1.62
RNU6-228P-201ENST00000362700 PRR20DP86480 221 aa4.96□□□□□ -1.62
RNU6-228P-201ENST00000362700 PRR20BP86481 221 aa4.96□□□□□ -1.62
RNU6-228P-201ENST00000362700 PRR20AP86496 221 aa4.96□□□□□ -1.62
RNU6-228P-201ENST00000362700 TMC2Q8TDI7 906 aa4.96□□□□□ -1.62
RNU6-228P-201ENST00000362700 PHF8Q9UPP1 1060 aa4.96□□□□□ -1.62
RNU6-228P-201ENST00000362700 KRTAP4-8A0A0G2JLE6 195 aa4.95□□□□□ -1.62
RNU6-228P-201ENST00000362700 KCNMA1Q12791 1236 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms