RNA–Protein interactions for RNA: ENST00000362061.3

CACNA1S-201, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CACNA1S, Length 6,166 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-201ENST00000362061 NGDNQ8NEJ9 315 aaKnown RBP13.61□□□□□ -0.23
CACNA1S-201ENST00000362061 SPAG9O60271 1321 aaKnown RBP13.6□□□□□ -0.23
CACNA1S-201ENST00000362061 NUTM2DQ5VT03 806 aaPredicted RBP13.6□□□□□ -0.23
CACNA1S-201ENST00000362061 OSCARQ8IYS5 282 aa13.6□□□□□ -0.23
CACNA1S-201ENST00000362061 SMARCA2P51531 1590 aa13.6□□□□□ -0.23
CACNA1S-201ENST00000362061 NUP155O75694 1391 aa13.59□□□□□ -0.23
CACNA1S-201ENST00000362061 HNRNPMP52272 730 aaKnown RBP eCLIP13.58□□□□□ -0.23
CACNA1S-201ENST00000362061 DDRGK1Q96HY6 314 aa13.58□□□□□ -0.24
CACNA1S-201ENST00000362061 JPH4Q96JJ6 628 aa13.58□□□□□ -0.24
CACNA1S-201ENST00000362061 FOXD1Q16676 465 aa13.57□□□□□ -0.24
CACNA1S-201ENST00000362061 ARHGAP35Q9NRY4 1499 aa13.57□□□□□ -0.24
CACNA1S-201ENST00000362061 NUTM2FA1L443 756 aa13.57□□□□□ -0.24
CACNA1S-201ENST00000362061 RGS3P49796 1198 aa13.56□□□□□ -0.24
CACNA1S-201ENST00000362061 ANKRD30AQ9BXX3 1397 aa13.56□□□□□ -0.24
CACNA1S-201ENST00000362061 CLSTN1O94985 981 aa13.55□□□□□ -0.24
CACNA1S-201ENST00000362061 G3V3G9 751 aa13.54□□□□□ -0.24
CACNA1S-201ENST00000362061 DCAF8Q5TAQ9 597 aa13.54□□□□□ -0.24
CACNA1S-201ENST00000362061 U2AF1L5P0DN76 240 aaPredicted RBP13.54□□□□□ -0.24
CACNA1S-201ENST00000362061 U2AF1Q01081 240 aaKnown RBP eCLIP13.54□□□□□ -0.24
CACNA1S-201ENST00000362061 FMN1Q68DA7 1419 aa13.53□□□□□ -0.24
CACNA1S-201ENST00000362061 CADPSQ9ULU8 1353 aa13.53□□□□□ -0.24
CACNA1S-201ENST00000362061 TERF2IPQ9NYB0 399 aa13.52□□□□□ -0.24
CACNA1S-201ENST00000362061 LTV1Q96GA3 475 aaPredicted RBP13.52□□□□□ -0.25
CACNA1S-201ENST00000362061 SUPT16HQ9Y5B9 1047 aaKnown RBP13.52□□□□□ -0.25
CACNA1S-201ENST00000362061 AMPHP49418 695 aa13.52□□□□□ -0.25
CACNA1S-201ENST00000362061 CCDC88BA6NC98 1476 aa13.51□□□□□ -0.25
CACNA1S-201ENST00000362061 ROCK2O75116 1388 aaKnown RBP13.51□□□□□ -0.25
CACNA1S-201ENST00000362061 CALD1Q05682 793 aaKnown RBP13.51□□□□□ -0.25
CACNA1S-201ENST00000362061 RSPH4AQ5TD94 716 aa13.51□□□□□ -0.25
CACNA1S-201ENST00000362061 GTF2E1P29083 439 aaPredicted RBP13.51□□□□□ -0.25
CACNA1S-201ENST00000362061 CHMP4AQ9BY43 222 aa13.5□□□□□ -0.25
CACNA1S-201ENST00000362061 NCBP3Q53F19 620 aaKnown RBP13.5□□□□□ -0.25
CACNA1S-201ENST00000362061 ANP32EQ9BTT0 268 aa13.5□□□□□ -0.25
CACNA1S-201ENST00000362061 TAF7LQ5H9L4 462 aa13.5□□□□□ -0.25
CACNA1S-201ENST00000362061 CHMP3Q9Y3E7 222 aa13.5□□□□□ -0.25
CACNA1S-201ENST00000362061 APBB1O00213 710 aa13.49□□□□□ -0.25
CACNA1S-201ENST00000362061 MEX3CQ5U5Q3 659 aaKnown RBP13.49□□□□□ -0.25
CACNA1S-201ENST00000362061 PTMAP06454 111 aaKnown RBP13.49□□□□□ -0.25
CACNA1S-201ENST00000362061 EIF3AQ14152 1382 aaKnown RBP13.49□□□□□ -0.25
CACNA1S-201ENST00000362061 EVA1CP58658 441 aa13.49□□□□□ -0.25
CACNA1S-201ENST00000362061 GORABQ5T7V8 394 aa13.48□□□□□ -0.25
CACNA1S-201ENST00000362061 MPHOSPH9Q99550 1183 aa13.48□□□□□ -0.25
CACNA1S-201ENST00000362061 TRIM44Q96DX7 344 aaPredicted RBP13.48□□□□□ -0.25
CACNA1S-201ENST00000362061 MSH5O43196 834 aa13.48□□□□□ -0.25
CACNA1S-201ENST00000362061 STK31Q9BXU1 1019 aa13.47□□□□□ -0.25
CACNA1S-201ENST00000362061 SETD5Q9C0A6 1442 aa13.47□□□□□ -0.25
CACNA1S-201ENST00000362061 IPO8O15397 1037 aaKnown RBP13.47□□□□□ -0.25
CACNA1S-201ENST00000362061 KTN1Q86UP2 1357 aaKnown RBP13.47□□□□□ -0.25
CACNA1S-201ENST00000362061 HSP90AB1P08238 724 aaKnown RBP13.46□□□□□ -0.25
CACNA1S-201ENST00000362061 HSPA5P11021 654 aaKnown RBP13.46□□□□□ -0.26
CACNA1S-201ENST00000362061 MCCP23508 829 aa13.46□□□□□ -0.26
CACNA1S-201ENST00000362061 FAM69CQ0P6D2 419 aa13.46□□□□□ -0.26
CACNA1S-201ENST00000362061 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.46□□□□□ -0.26
CACNA1S-201ENST00000362061 KANK4Q5T7N3 995 aaPredicted RBP13.45□□□□□ -0.26
CACNA1S-201ENST00000362061 GOLGA6L4A6NEF3 574 aa13.45□□□□□ -0.26
CACNA1S-201ENST00000362061 PLCB2Q00722 1185 aa13.45□□□□□ -0.26
CACNA1S-201ENST00000362061 MROH2BQ7Z745 1585 aa13.44□□□□□ -0.26
CACNA1S-201ENST00000362061 TIMELESSQ9UNS1 1208 aa13.44□□□□□ -0.26
CACNA1S-201ENST00000362061 PTPRGP23470 1445 aa13.44□□□□□ -0.26
CACNA1S-201ENST00000362061 GNL2Q13823 731 aaKnown RBP13.44□□□□□ -0.26
CACNA1S-201ENST00000362061 TRAK1Q9UPV9 953 aa13.43□□□□□ -0.26
CACNA1S-201ENST00000362061 MYO15BQ96JP2 1530 aa13.42□□□□□ -0.26
CACNA1S-201ENST00000362061 KIAA1211Q6ZU35 1233 aa13.42□□□□□ -0.26
CACNA1S-201ENST00000362061 FRAT2O75474 233 aaPredicted RBP13.42□□□□□ -0.26
CACNA1S-201ENST00000362061 PHF23Q9BUL5 403 aaPredicted RBP13.41□□□□□ -0.26
CACNA1S-201ENST00000362061 ABCC8Q09428 1581 aa13.41□□□□□ -0.26
CACNA1S-201ENST00000362061 CCDC18Q5T9S5 1454 aa13.41□□□□□ -0.26
CACNA1S-201ENST00000362061 VPS8Q8N3P4 1428 aa13.4□□□□□ -0.26
CACNA1S-201ENST00000362061 HDAC5Q9UQL6 1122 aa13.4□□□□□ -0.26
CACNA1S-201ENST00000362061 FHOD3Q2V2M9 1422 aa13.4□□□□□ -0.26
CACNA1S-201ENST00000362061 GOLGA6L6A8MZA4 724 aa13.39□□□□□ -0.27
CACNA1S-201ENST00000362061 ITPRIPQ8IWB1 547 aa13.38□□□□□ -0.27
CACNA1S-201ENST00000362061 RAPGEF2Q9Y4G8 1499 aa13.38□□□□□ -0.27
CACNA1S-201ENST00000362061 VGFO15240 615 aaPredicted RBP13.38□□□□□ -0.27
CACNA1S-201ENST00000362061 DNTTIP2Q5QJE6 756 aaKnown RBP13.37□□□□□ -0.27
CACNA1S-201ENST00000362061 CFAP44Q96MT7 982 aa13.37□□□□□ -0.27
CACNA1S-201ENST00000362061 SLC4A10Q6U841 1118 aa13.37□□□□□ -0.27
CACNA1S-201ENST00000362061 PPP4R2Q9NY27 417 aa13.37□□□□□ -0.27
CACNA1S-201ENST00000362061 C1orf141Q5JVX7 400 aa13.36□□□□□ -0.27
CACNA1S-201ENST00000362061 LMOD3Q0VAK6 560 aa13.36□□□□□ -0.27
CACNA1S-201ENST00000362061 NRDCO43847 1150 aa13.35□□□□□ -0.27
CACNA1S-201ENST00000362061 HSCBQ8IWL3 235 aa13.35□□□□□ -0.27
CACNA1S-201ENST00000362061 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.35□□□□□ -0.27
CACNA1S-201ENST00000362061 RALBP1Q15311 655 aa13.35□□□□□ -0.27
CACNA1S-201ENST00000362061 GPATCH3Q96I76 525 aa13.34□□□□□ -0.27
CACNA1S-201ENST00000362061 FANCD2Q9BXW9 1451 aa13.34□□□□□ -0.27
CACNA1S-201ENST00000362061 PSME1Q06323 249 aa13.34□□□□□ -0.27
CACNA1S-201ENST00000362061 SYTL4Q96C24 671 aaPredicted RBP13.34□□□□□ -0.27
CACNA1S-201ENST00000362061 COG3Q96JB2 828 aa13.34□□□□□ -0.27
CACNA1S-201ENST00000362061 B4GALNT3Q6L9W6 998 aa13.34□□□□□ -0.27
CACNA1S-201ENST00000362061 KLHL34Q8N239 644 aa13.34□□□□□ -0.27
CACNA1S-201ENST00000362061 ATF3P18847 181 aa13.33□□□□□ -0.28
CACNA1S-201ENST00000362061 SMC4Q9NTJ3 1288 aa13.32□□□□□ -0.28
CACNA1S-201ENST00000362061 MINK1Q8N4C8 1332 aaPredicted RBP13.31□□□□□ -0.28
CACNA1S-201ENST00000362061 HMMRO75330 724 aa13.31□□□□□ -0.28
CACNA1S-201ENST00000362061 RAB3GAP2Q9H2M9 1393 aa13.31□□□□□ -0.28
CACNA1S-201ENST00000362061 TOMM22Q9NS69 142 aa13.31□□□□□ -0.28
CACNA1S-201ENST00000362061 TTC5Q8N0Z6 440 aa13.3□□□□□ -0.28
CACNA1S-201ENST00000362061 TEFQ10587 303 aa13.3□□□□□ -0.28
CACNA1S-201ENST00000362061 L3MBTL2Q969R5 705 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms