RNA–Protein interactions for RNA: ENST00000362061.3

CACNA1S-201, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CACNA1S, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-201ENST00000362061 NGDNQ8NEJ9 315 aaKnown RBP13.61□□□□□ -0.23
CACNA1S-201ENST00000362061 SPAG9O60271 1321 aaKnown RBP13.6□□□□□ -0.23
CACNA1S-201ENST00000362061 NUTM2DQ5VT03 806 aaPredicted RBP13.6□□□□□ -0.23
CACNA1S-201ENST00000362061 OSCARQ8IYS5 282 aa13.6□□□□□ -0.23
CACNA1S-201ENST00000362061 SMARCA2P51531 1590 aa13.6□□□□□ -0.23
CACNA1S-201ENST00000362061 NUP155O75694 1391 aa13.59□□□□□ -0.23
CACNA1S-201ENST00000362061 HNRNPMP52272 730 aaKnown RBP eCLIP13.58□□□□□ -0.23
CACNA1S-201ENST00000362061 DDRGK1Q96HY6 314 aa13.58□□□□□ -0.24
CACNA1S-201ENST00000362061 JPH4Q96JJ6 628 aa13.58□□□□□ -0.24
CACNA1S-201ENST00000362061 FOXD1Q16676 465 aa13.57□□□□□ -0.24
CACNA1S-201ENST00000362061 ARHGAP35Q9NRY4 1499 aa13.57□□□□□ -0.24
CACNA1S-201ENST00000362061 NUTM2FA1L443 756 aa13.57□□□□□ -0.24
CACNA1S-201ENST00000362061 RGS3P49796 1198 aa13.56□□□□□ -0.24
CACNA1S-201ENST00000362061 ANKRD30AQ9BXX3 1397 aa13.56□□□□□ -0.24
CACNA1S-201ENST00000362061 CLSTN1O94985 981 aa13.55□□□□□ -0.24
CACNA1S-201ENST00000362061 G3V3G9 751 aa13.54□□□□□ -0.24
CACNA1S-201ENST00000362061 DCAF8Q5TAQ9 597 aa13.54□□□□□ -0.24
CACNA1S-201ENST00000362061 U2AF1L5P0DN76 240 aaPredicted RBP13.54□□□□□ -0.24
CACNA1S-201ENST00000362061 U2AF1Q01081 240 aaKnown RBP eCLIP13.54□□□□□ -0.24
CACNA1S-201ENST00000362061 FMN1Q68DA7 1419 aa13.53□□□□□ -0.24
CACNA1S-201ENST00000362061 CADPSQ9ULU8 1353 aa13.53□□□□□ -0.24
CACNA1S-201ENST00000362061 TERF2IPQ9NYB0 399 aa13.52□□□□□ -0.24
CACNA1S-201ENST00000362061 LTV1Q96GA3 475 aaPredicted RBP13.52□□□□□ -0.25
CACNA1S-201ENST00000362061 SUPT16HQ9Y5B9 1047 aaKnown RBP13.52□□□□□ -0.25
CACNA1S-201ENST00000362061 AMPHP49418 695 aa13.52□□□□□ -0.25
CACNA1S-201ENST00000362061 CCDC88BA6NC98 1476 aa13.51□□□□□ -0.25
CACNA1S-201ENST00000362061 ROCK2O75116 1388 aaKnown RBP13.51□□□□□ -0.25
CACNA1S-201ENST00000362061 CALD1Q05682 793 aaKnown RBP13.51□□□□□ -0.25
CACNA1S-201ENST00000362061 RSPH4AQ5TD94 716 aa13.51□□□□□ -0.25
CACNA1S-201ENST00000362061 GTF2E1P29083 439 aaPredicted RBP13.51□□□□□ -0.25
CACNA1S-201ENST00000362061 CHMP4AQ9BY43 222 aa13.5□□□□□ -0.25
CACNA1S-201ENST00000362061 NCBP3Q53F19 620 aaKnown RBP13.5□□□□□ -0.25
CACNA1S-201ENST00000362061 ANP32EQ9BTT0 268 aa13.5□□□□□ -0.25
CACNA1S-201ENST00000362061 TAF7LQ5H9L4 462 aa13.5□□□□□ -0.25
CACNA1S-201ENST00000362061 CHMP3Q9Y3E7 222 aa13.5□□□□□ -0.25
CACNA1S-201ENST00000362061 APBB1O00213 710 aa13.49□□□□□ -0.25
CACNA1S-201ENST00000362061 MEX3CQ5U5Q3 659 aaKnown RBP13.49□□□□□ -0.25
CACNA1S-201ENST00000362061 PTMAP06454 111 aaKnown RBP13.49□□□□□ -0.25
CACNA1S-201ENST00000362061 EIF3AQ14152 1382 aaKnown RBP13.49□□□□□ -0.25
CACNA1S-201ENST00000362061 EVA1CP58658 441 aa13.49□□□□□ -0.25
CACNA1S-201ENST00000362061 GORABQ5T7V8 394 aa13.48□□□□□ -0.25
CACNA1S-201ENST00000362061 MPHOSPH9Q99550 1183 aa13.48□□□□□ -0.25
CACNA1S-201ENST00000362061 TRIM44Q96DX7 344 aaPredicted RBP13.48□□□□□ -0.25
CACNA1S-201ENST00000362061 MSH5O43196 834 aa13.48□□□□□ -0.25
CACNA1S-201ENST00000362061 STK31Q9BXU1 1019 aa13.47□□□□□ -0.25
CACNA1S-201ENST00000362061 SETD5Q9C0A6 1442 aa13.47□□□□□ -0.25
CACNA1S-201ENST00000362061 IPO8O15397 1037 aaKnown RBP13.47□□□□□ -0.25
CACNA1S-201ENST00000362061 KTN1Q86UP2 1357 aaKnown RBP13.47□□□□□ -0.25
CACNA1S-201ENST00000362061 HSP90AB1P08238 724 aaKnown RBP13.46□□□□□ -0.25
CACNA1S-201ENST00000362061 HSPA5P11021 654 aaKnown RBP13.46□□□□□ -0.26
CACNA1S-201ENST00000362061 MCCP23508 829 aa13.46□□□□□ -0.26
CACNA1S-201ENST00000362061 FAM69CQ0P6D2 419 aa13.46□□□□□ -0.26
CACNA1S-201ENST00000362061 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.46□□□□□ -0.26
CACNA1S-201ENST00000362061 KANK4Q5T7N3 995 aaPredicted RBP13.45□□□□□ -0.26
CACNA1S-201ENST00000362061 GOLGA6L4A6NEF3 574 aa13.45□□□□□ -0.26
CACNA1S-201ENST00000362061 PLCB2Q00722 1185 aa13.45□□□□□ -0.26
CACNA1S-201ENST00000362061 MROH2BQ7Z745 1585 aa13.44□□□□□ -0.26
CACNA1S-201ENST00000362061 TIMELESSQ9UNS1 1208 aa13.44□□□□□ -0.26
CACNA1S-201ENST00000362061 PTPRGP23470 1445 aa13.44□□□□□ -0.26
CACNA1S-201ENST00000362061 GNL2Q13823 731 aaKnown RBP13.44□□□□□ -0.26
CACNA1S-201ENST00000362061 TRAK1Q9UPV9 953 aa13.43□□□□□ -0.26
CACNA1S-201ENST00000362061 MYO15BQ96JP2 1530 aa13.42□□□□□ -0.26
CACNA1S-201ENST00000362061 KIAA1211Q6ZU35 1233 aa13.42□□□□□ -0.26
CACNA1S-201ENST00000362061 FRAT2O75474 233 aaPredicted RBP13.42□□□□□ -0.26
CACNA1S-201ENST00000362061 PHF23Q9BUL5 403 aaPredicted RBP13.41□□□□□ -0.26
CACNA1S-201ENST00000362061 ABCC8Q09428 1581 aa13.41□□□□□ -0.26
CACNA1S-201ENST00000362061 CCDC18Q5T9S5 1454 aa13.41□□□□□ -0.26
CACNA1S-201ENST00000362061 VPS8Q8N3P4 1428 aa13.4□□□□□ -0.26
CACNA1S-201ENST00000362061 HDAC5Q9UQL6 1122 aa13.4□□□□□ -0.26
CACNA1S-201ENST00000362061 FHOD3Q2V2M9 1422 aa13.4□□□□□ -0.26
CACNA1S-201ENST00000362061 GOLGA6L6A8MZA4 724 aa13.39□□□□□ -0.27
CACNA1S-201ENST00000362061 ITPRIPQ8IWB1 547 aa13.38□□□□□ -0.27
CACNA1S-201ENST00000362061 RAPGEF2Q9Y4G8 1499 aa13.38□□□□□ -0.27
CACNA1S-201ENST00000362061 VGFO15240 615 aaPredicted RBP13.38□□□□□ -0.27
CACNA1S-201ENST00000362061 DNTTIP2Q5QJE6 756 aaKnown RBP13.37□□□□□ -0.27
CACNA1S-201ENST00000362061 CFAP44Q96MT7 982 aa13.37□□□□□ -0.27
CACNA1S-201ENST00000362061 SLC4A10Q6U841 1118 aa13.37□□□□□ -0.27
CACNA1S-201ENST00000362061 PPP4R2Q9NY27 417 aa13.37□□□□□ -0.27
CACNA1S-201ENST00000362061 C1orf141Q5JVX7 400 aa13.36□□□□□ -0.27
CACNA1S-201ENST00000362061 LMOD3Q0VAK6 560 aa13.36□□□□□ -0.27
CACNA1S-201ENST00000362061 NRDCO43847 1150 aa13.35□□□□□ -0.27
CACNA1S-201ENST00000362061 HSCBQ8IWL3 235 aa13.35□□□□□ -0.27
CACNA1S-201ENST00000362061 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.35□□□□□ -0.27
CACNA1S-201ENST00000362061 RALBP1Q15311 655 aa13.35□□□□□ -0.27
CACNA1S-201ENST00000362061 GPATCH3Q96I76 525 aa13.34□□□□□ -0.27
CACNA1S-201ENST00000362061 FANCD2Q9BXW9 1451 aa13.34□□□□□ -0.27
CACNA1S-201ENST00000362061 PSME1Q06323 249 aa13.34□□□□□ -0.27
CACNA1S-201ENST00000362061 SYTL4Q96C24 671 aaPredicted RBP13.34□□□□□ -0.27
CACNA1S-201ENST00000362061 COG3Q96JB2 828 aa13.34□□□□□ -0.27
CACNA1S-201ENST00000362061 B4GALNT3Q6L9W6 998 aa13.34□□□□□ -0.27
CACNA1S-201ENST00000362061 KLHL34Q8N239 644 aa13.34□□□□□ -0.27
CACNA1S-201ENST00000362061 ATF3P18847 181 aa13.33□□□□□ -0.28
CACNA1S-201ENST00000362061 SMC4Q9NTJ3 1288 aa13.32□□□□□ -0.28
CACNA1S-201ENST00000362061 MINK1Q8N4C8 1332 aaPredicted RBP13.31□□□□□ -0.28
CACNA1S-201ENST00000362061 HMMRO75330 724 aa13.31□□□□□ -0.28
CACNA1S-201ENST00000362061 RAB3GAP2Q9H2M9 1393 aa13.31□□□□□ -0.28
CACNA1S-201ENST00000362061 TOMM22Q9NS69 142 aa13.31□□□□□ -0.28
CACNA1S-201ENST00000362061 TTC5Q8N0Z6 440 aa13.3□□□□□ -0.28
CACNA1S-201ENST00000362061 TEFQ10587 303 aa13.3□□□□□ -0.28
CACNA1S-201ENST00000362061 L3MBTL2Q969R5 705 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms