RNA–Protein interactions for RNA: ENST00000361724.3

PCDH11X-203, Transcript of protocadherin 11 X-linked, humanhuman

TSL 1 (best)

Gene PCDH11X, Length 4,603 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-203ENST00000361724 TSPY4P0CV99 314 aa4.48□□□□□ -1.69
PCDH11X-203ENST00000361724 TSPY10P0CW01 314 aa4.48□□□□□ -1.69
PCDH11X-203ENST00000361724 CCER1Q8TC90 406 aaPredicted RBP4.47□□□□□ -1.69
PCDH11X-203ENST00000361724 TRPC5Q9UL62 973 aaPredicted RBP4.47□□□□□ -1.69
PCDH11X-203ENST00000361724 RBM6P78332 1123 aaKnown RBP4.47□□□□□ -1.69
PCDH11X-203ENST00000361724 C1QBPQ07021 282 aaKnown RBP4.47□□□□□ -1.69
PCDH11X-203ENST00000361724 CNKSR2Q8WXI2 1034 aa4.47□□□□□ -1.69
PCDH11X-203ENST00000361724 ZNF608Q9ULD9 1512 aaPredicted RBP4.47□□□□□ -1.69
PCDH11X-203ENST00000361724 PDE3BQ13370 1112 aa4.47□□□□□ -1.69
PCDH11X-203ENST00000361724 TSPYL2Q9H2G4 693 aaPredicted RBP4.46□□□□□ -1.69
PCDH11X-203ENST00000361724 SPATA31A6Q5VVP1 1343 aa4.46□□□□□ -1.7
PCDH11X-203ENST00000361724 YEATS2Q9ULM3 1422 aa4.46□□□□□ -1.7
PCDH11X-203ENST00000361724 APLP1P51693 650 aa4.46□□□□□ -1.7
PCDH11X-203ENST00000361724 PTPRTO14522 1441 aa4.45□□□□□ -1.7
PCDH11X-203ENST00000361724 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.45□□□□□ -1.7
PCDH11X-203ENST00000361724 CAPN15O75808 1086 aa4.45□□□□□ -1.7
PCDH11X-203ENST00000361724 CADPS2Q86UW7 1296 aa4.45□□□□□ -1.7
PCDH11X-203ENST00000361724 TNIKQ9UKE5 1360 aa4.45□□□□□ -1.7
PCDH11X-203ENST00000361724 PAXIP1Q6ZW49 1069 aaPredicted RBP4.45□□□□□ -1.7
PCDH11X-203ENST00000361724 LMOD2Q6P5Q4 547 aa4.45□□□□□ -1.7
PCDH11X-203ENST00000361724 GPBP1L1Q9HC44 474 aaPredicted RBP4.45□□□□□ -1.7
PCDH11X-203ENST00000361724 NEFMP07197 916 aa4.44□□□□□ -1.7
PCDH11X-203ENST00000361724 EVA1CP58658 441 aa4.44□□□□□ -1.7
PCDH11X-203ENST00000361724 LRRC59Q96AG4 307 aaKnown RBP4.43□□□□□ -1.7
PCDH11X-203ENST00000361724 ADGRL1O94910 1474 aa4.43□□□□□ -1.7
PCDH11X-203ENST00000361724 KIAA0586Q9BVV6 1533 aa4.43□□□□□ -1.7
PCDH11X-203ENST00000361724 ATAD2BQ9ULI0 1458 aa4.43□□□□□ -1.7
PCDH11X-203ENST00000361724 CFAP43Q8NDM7 1665 aa4.42□□□□□ -1.7
PCDH11X-203ENST00000361724 RANGAP1P46060 587 aaPredicted RBP4.42□□□□□ -1.7
PCDH11X-203ENST00000361724 RSPH4AQ5TD94 716 aa4.42□□□□□ -1.7
PCDH11X-203ENST00000361724 WRNQ14191 1432 aaPredicted RBP eCLIP4.42□□□□□ -1.7
PCDH11X-203ENST00000361724 CHGAP10645 457 aaKnown RBP4.42□□□□□ -1.7
PCDH11X-203ENST00000361724 LRRC9Q6ZRR7 1453 aa4.42□□□□□ -1.7
PCDH11X-203ENST00000361724 YTHDC1Q96MU7 727 aaKnown RBP4.41□□□□□ -1.7
PCDH11X-203ENST00000361724 JCADQ9P266 1359 aa4.41□□□□□ -1.7
PCDH11X-203ENST00000361724 CCDC18Q5T9S5 1454 aa4.4□□□□□ -1.7
PCDH11X-203ENST00000361724 BCL11BQ9C0K0 894 aaPredicted RBP4.4□□□□□ -1.7
PCDH11X-203ENST00000361724 WDR97A6NE52 1622 aa4.4□□□□□ -1.7
PCDH11X-203ENST00000361724 KDM2BQ8NHM5 1336 aa4.4□□□□□ -1.7
PCDH11X-203ENST00000361724 CD109Q6YHK3 1445 aa4.4□□□□□ -1.71
PCDH11X-203ENST00000361724 SUPT5HO00267 1087 aaKnown RBP4.39□□□□□ -1.71
PCDH11X-203ENST00000361724 ECE1P42892 770 aa4.39□□□□□ -1.71
PCDH11X-203ENST00000361724 PRG4Q92954 1404 aaPredicted RBP4.39□□□□□ -1.71
PCDH11X-203ENST00000361724 RBM27Q9P2N5 1060 aaKnown RBP4.39□□□□□ -1.71
PCDH11X-203ENST00000361724 FLAD1Q8NFF5 587 aa4.39□□□□□ -1.71
PCDH11X-203ENST00000361724 MLLT1Q03111 559 aaPredicted RBP4.39□□□□□ -1.71
PCDH11X-203ENST00000361724 ZEB1P37275 1124 aaPredicted RBP4.38□□□□□ -1.71
PCDH11X-203ENST00000361724 AXDND1Q5T1B0 1012 aaPredicted RBP4.38□□□□□ -1.71
PCDH11X-203ENST00000361724 WWC3Q9ULE0 1092 aa4.38□□□□□ -1.71
PCDH11X-203ENST00000361724 FHAD1B1AJZ9 1412 aa4.38□□□□□ -1.71
PCDH11X-203ENST00000361724 EIF4E1BA6NMX2 242 aaKnown RBP4.38□□□□□ -1.71
PCDH11X-203ENST00000361724 SRPK2P78362 688 aaKnown RBP4.38□□□□□ -1.71
PCDH11X-203ENST00000361724 PMFBP1Q8TBY8 1022 aa4.38□□□□□ -1.71
PCDH11X-203ENST00000361724 HRCP23327 699 aa4.37□□□□□ -1.71
PCDH11X-203ENST00000361724 SYMPKQ92797 1274 aaKnown RBP4.37□□□□□ -1.71
PCDH11X-203ENST00000361724 DPY19L2Q6NUT2 758 aa4.37□□□□□ -1.71
PCDH11X-203ENST00000361724 CABP2Q9NPB3 220 aa4.37□□□□□ -1.71
PCDH11X-203ENST00000361724 EIF3AQ14152 1382 aaKnown RBP4.37□□□□□ -1.71
PCDH11X-203ENST00000361724 CEP162Q5TB80 1403 aa4.37□□□□□ -1.71
PCDH11X-203ENST00000361724 FAM135AQ9P2D6 1515 aa4.37□□□□□ -1.71
PCDH11X-203ENST00000361724 DENND4BO75064 1496 aaPredicted RBP4.37□□□□□ -1.71
PCDH11X-203ENST00000361724 WDR62O43379 1518 aa4.36□□□□□ -1.71
PCDH11X-203ENST00000361724 RIMBP3CA6NJZ7 1639 aa4.36□□□□□ -1.71
PCDH11X-203ENST00000361724 RIMBP3BA6NNM3 1639 aa4.36□□□□□ -1.71
PCDH11X-203ENST00000361724 RIMBP3Q9UFD9 1639 aa4.36□□□□□ -1.71
PCDH11X-203ENST00000361724 QTRT2Q9H974 415 aaKnown RBP4.36□□□□□ -1.71
PCDH11X-203ENST00000361724 ZNF777Q9ULD5 760 aaPredicted RBP4.36□□□□□ -1.71
PCDH11X-203ENST00000361724 RAPGEF3O95398 923 aa4.36□□□□□ -1.71
PCDH11X-203ENST00000361724 CA12O43570 354 aa4.35□□□□□ -1.71
PCDH11X-203ENST00000361724 CSB-PGBD3P0DP91 1061 aa4.35□□□□□ -1.71
PCDH11X-203ENST00000361724 NEUROD2Q15784 382 aa4.35□□□□□ -1.71
PCDH11X-203ENST00000361724 ABCC10Q5T3U5 1492 aa4.35□□□□□ -1.71
PCDH11X-203ENST00000361724 CAPN2P17655 700 aa4.35□□□□□ -1.71
PCDH11X-203ENST00000361724 CTCFP49711 727 aaPredicted RBP4.35□□□□□ -1.71
PCDH11X-203ENST00000361724 GLIPR1L2Q4G1C9 344 aa4.35□□□□□ -1.71
PCDH11X-203ENST00000361724 CDCA7Q9BWT1 371 aaPredicted RBP4.35□□□□□ -1.71
PCDH11X-203ENST00000361724 G3V3G9 751 aa4.35□□□□□ -1.71
PCDH11X-203ENST00000361724 PPEF1O14829 653 aaPredicted RBP4.35□□□□□ -1.71
PCDH11X-203ENST00000361724 DCAF8Q5TAQ9 597 aa4.35□□□□□ -1.71
PCDH11X-203ENST00000361724 BCL11AQ9H165 835 aa4.35□□□□□ -1.71
PCDH11X-203ENST00000361724 HDAC9Q9UKV0 1011 aa4.35□□□□□ -1.71
PCDH11X-203ENST00000361724 NBPF20Q3BBV1 942 aa4.34□□□□□ -1.71
PCDH11X-203ENST00000361724 CCDC174Q6PII3 467 aa4.34□□□□□ -1.71
PCDH11X-203ENST00000361724 TMEM106CQ9BVX2 250 aa4.34□□□□□ -1.71
PCDH11X-203ENST00000361724 CABP1Q9NZU7 370 aa4.34□□□□□ -1.71
PCDH11X-203ENST00000361724 NR2E3Q9Y5X4 410 aa4.34□□□□□ -1.71
PCDH11X-203ENST00000361724 EIF5BO60841 1220 aaKnown RBP4.34□□□□□ -1.71
PCDH11X-203ENST00000361724 IRF2BPLQ9H1B7 796 aa4.34□□□□□ -1.71
PCDH11X-203ENST00000361724 ATF5Q9Y2D1 282 aaPredicted RBP4.34□□□□□ -1.71
PCDH11X-203ENST00000361724 HSPA2P54652 639 aa4.34□□□□□ -1.71
PCDH11X-203ENST00000361724 KIF27Q86VH2 1401 aa4.34□□□□□ -1.71
PCDH11X-203ENST00000361724 USP19O94966 1318 aa4.34□□□□□ -1.72
PCDH11X-203ENST00000361724 WASHC2CQ9Y4E1 1318 aa4.34□□□□□ -1.72
PCDH11X-203ENST00000361724 CWC22Q9HCG8 908 aaKnown RBP4.34□□□□□ -1.72
PCDH11X-203ENST00000361724 UBTFP17480 764 aaKnown RBP4.33□□□□□ -1.72
PCDH11X-203ENST00000361724 GOLGA2Q08379 1002 aa4.33□□□□□ -1.72
PCDH11X-203ENST00000361724 ZNF326Q5BKZ1 582 aaKnown RBP4.33□□□□□ -1.72
PCDH11X-203ENST00000361724 NINLQ9Y2I6 1382 aa4.33□□□□□ -1.72
PCDH11X-203ENST00000361724 LMOD1P29536 600 aaPredicted RBP4.33□□□□□ -1.72
PCDH11X-203ENST00000361724 SPAG9O60271 1321 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms