RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 PREX2Q70Z35 1606 aa21.45■■□□□ 1.02
NSMCE1-201ENST00000361439 CFDP1Q9UEE9 299 aaPredicted RBP21.43■■□□□ 1.02
NSMCE1-201ENST00000361439 ARHGAP5Q13017 1502 aa21.43■■□□□ 1.02
NSMCE1-201ENST00000361439 CDC42BPAQ5VT25 1732 aa21.43■■□□□ 1.02
NSMCE1-201ENST00000361439 AKNAQ7Z591 1439 aa21.42■■□□□ 1.02
NSMCE1-201ENST00000361439 ITSN2Q9NZM3 1697 aa21.42■■□□□ 1.02
NSMCE1-201ENST00000361439 CDC42BPBQ9Y5S2 1711 aa21.41■■□□□ 1.02
NSMCE1-201ENST00000361439 MYOM3Q5VTT5 1437 aa21.4■■□□□ 1.02
NSMCE1-201ENST00000361439 MIA2Q96PC5 1412 aa21.4■■□□□ 1.02
NSMCE1-201ENST00000361439 PLEKHH2Q8IVE3 1493 aa21.38■■□□□ 1.01
NSMCE1-201ENST00000361439 KIAA1107Q9UPP5 1409 aa21.36■■□□□ 1.01
NSMCE1-201ENST00000361439 ADGRL1O94910 1474 aa21.35■■□□□ 1.01
NSMCE1-201ENST00000361439 KDM6BO15054 1643 aa21.33■■□□□ 1.01
NSMCE1-201ENST00000361439 DENND4BO75064 1496 aaPredicted RBP21.32■■□□□ 1
NSMCE1-201ENST00000361439 SCAPERQ9BY12 1400 aa21.32■■□□□ 1
NSMCE1-201ENST00000361439 ZNF777Q9ULD5 760 aaPredicted RBP21.31■■□□□ 1
NSMCE1-201ENST00000361439 COL17A1Q9UMD9 1497 aaPredicted RBP21.31■■□□□ 1
NSMCE1-201ENST00000361439 FGD6Q6ZV73 1430 aa21.3■■□□□ 1
NSMCE1-201ENST00000361439 ABCC1P33527 1531 aa21.3■■□□□ 1
NSMCE1-201ENST00000361439 RSPH4AQ5TD94 716 aa21.3■■□□□ 1
NSMCE1-201ENST00000361439 SAMD9LQ8IVG5 1584 aa21.3■■□□□ 1
NSMCE1-201ENST00000361439 POGZQ7Z3K3 1410 aa21.29■■□□□ 1
NSMCE1-201ENST00000361439 ZNF518AQ6AHZ1 1483 aa21.27■■□□□ 1
NSMCE1-201ENST00000361439 CAMSAP2Q08AD1 1489 aa21.26■□□□□ 0.99
NSMCE1-201ENST00000361439 PPARGC1BQ86YN6 1023 aaKnown RBP21.26■□□□□ 0.99
NSMCE1-201ENST00000361439 TCOF1Q13428 1488 aaKnown RBP21.26■□□□□ 0.99
NSMCE1-201ENST00000361439 RAPGEF3O95398 923 aa21.25■□□□□ 0.99
NSMCE1-201ENST00000361439 ZNF644Q9H582 1327 aaPredicted RBP21.25■□□□□ 0.99
NSMCE1-201ENST00000361439 ARHGEF12Q9NZN5 1544 aa21.24■□□□□ 0.99
NSMCE1-201ENST00000361439 MBD5Q9P267 1494 aa21.24■□□□□ 0.99
NSMCE1-201ENST00000361439 SYCP2Q9BX26 1530 aa21.23■□□□□ 0.99
NSMCE1-201ENST00000361439 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.23■□□□□ 0.99
NSMCE1-201ENST00000361439 PTPN23Q9H3S7 1636 aa21.22■□□□□ 0.99
NSMCE1-201ENST00000361439 MAGI2Q86UL8 1455 aa21.22■□□□□ 0.99
NSMCE1-201ENST00000361439 RICTORQ6R327 1708 aa21.22■□□□□ 0.99
NSMCE1-201ENST00000361439 HNRNPMP52272 730 aaKnown RBP eCLIP21.22■□□□□ 0.99
NSMCE1-201ENST00000361439 ZMYM4Q5VZL5 1548 aa21.21■□□□□ 0.99
NSMCE1-201ENST00000361439 KDM5CP41229 1560 aa21.21■□□□□ 0.99
NSMCE1-201ENST00000361439 ARHGEF5Q12774 1597 aa21.21■□□□□ 0.99
NSMCE1-201ENST00000361439 FRMPD1Q5SYB0 1578 aa21.21■□□□□ 0.99
NSMCE1-201ENST00000361439 TRAPPC8Q9Y2L5 1435 aa21.21■□□□□ 0.99
NSMCE1-201ENST00000361439 AFAP1Q8N556 730 aa21.19■□□□□ 0.98
NSMCE1-201ENST00000361439 RRBP1Q9P2E9 1410 aaKnown RBP21.19■□□□□ 0.98
NSMCE1-201ENST00000361439 CCDC141Q6ZP82 1450 aa21.19■□□□□ 0.98
NSMCE1-201ENST00000361439 MLH3Q9UHC1 1453 aa21.18■□□□□ 0.98
NSMCE1-201ENST00000361439 RTEL1-TNFRSF6BF6WH68 1400 aa21.15■□□□□ 0.98
NSMCE1-201ENST00000361439 TSPY4P0CV99 314 aa21.15■□□□□ 0.98
NSMCE1-201ENST00000361439 TSPY10P0CW01 314 aa21.15■□□□□ 0.98
NSMCE1-201ENST00000361439 SPAG9O60271 1321 aaKnown RBP21.14■□□□□ 0.97
NSMCE1-201ENST00000361439 FAM50AQ14320 339 aaKnown RBP21.13■□□□□ 0.97
NSMCE1-201ENST00000361439 HECW2Q9P2P5 1572 aa21.11■□□□□ 0.97
NSMCE1-201ENST00000361439 SHANK2Q9UPX8 1470 aa21.11■□□□□ 0.97
NSMCE1-201ENST00000361439 DNMT1P26358 1616 aaKnown RBP21.1■□□□□ 0.97
NSMCE1-201ENST00000361439 ABCC5O15440 1437 aa21.1■□□□□ 0.97
NSMCE1-201ENST00000361439 DAPK1P53355 1430 aa21.1■□□□□ 0.97
NSMCE1-201ENST00000361439 ZFYVE16Q7Z3T8 1539 aa21.09■□□□□ 0.97
NSMCE1-201ENST00000361439 MAST1Q9Y2H9 1570 aa21.08■□□□□ 0.97
NSMCE1-201ENST00000361439 ARHGEF40Q8TER5 1519 aa21.08■□□□□ 0.96
NSMCE1-201ENST00000361439 INO80Q9ULG1 1556 aaPredicted RBP21.07■□□□□ 0.96
NSMCE1-201ENST00000361439 ATP7AQ04656 1500 aa21.07■□□□□ 0.96
NSMCE1-201ENST00000361439 C9orf84Q5VXU9 1444 aa21.06■□□□□ 0.96
NSMCE1-201ENST00000361439 MYT1LQ9UL68 1186 aa21.06■□□□□ 0.96
NSMCE1-201ENST00000361439 ATP10AO60312 1499 aa21.06■□□□□ 0.96
NSMCE1-201ENST00000361439 KIDINS220Q9ULH0 1771 aa21.05■□□□□ 0.96
NSMCE1-201ENST00000361439 YEATS2Q9ULM3 1422 aa21.04■□□□□ 0.96
NSMCE1-201ENST00000361439 CROCC2H7BZ55 1655 aa21.02■□□□□ 0.96
NSMCE1-201ENST00000361439 REREQ9P2R6 1566 aa21.02■□□□□ 0.96
NSMCE1-201ENST00000361439 DIP2CQ9Y2E4 1556 aa21.01■□□□□ 0.95
NSMCE1-201ENST00000361439 ADGRL2O95490 1459 aa21■□□□□ 0.95
NSMCE1-201ENST00000361439 ROCK1Q13464 1354 aa20.99■□□□□ 0.95
NSMCE1-201ENST00000361439 ANKRD30AQ9BXX3 1397 aa20.99■□□□□ 0.95
NSMCE1-201ENST00000361439 PLXNC1O60486 1568 aa20.99■□□□□ 0.95
NSMCE1-201ENST00000361439 ABCA6Q8N139 1617 aa20.99■□□□□ 0.95
NSMCE1-201ENST00000361439 NCOA1Q15788 1441 aa20.97■□□□□ 0.95
NSMCE1-201ENST00000361439 DHX29Q7Z478 1369 aaKnown RBP20.97■□□□□ 0.95
NSMCE1-201ENST00000361439 ADGBQ8N7X0 1667 aa20.96■□□□□ 0.95
NSMCE1-201ENST00000361439 PTPRKQ15262 1439 aa20.95■□□□□ 0.95
NSMCE1-201ENST00000361439 A2MP01023 1474 aa20.95■□□□□ 0.94
NSMCE1-201ENST00000361439 AGLP35573 1532 aa20.95■□□□□ 0.94
NSMCE1-201ENST00000361439 CHIC2Q9UKJ5 165 aa20.93■□□□□ 0.94
NSMCE1-201ENST00000361439 KIF15Q9NS87 1388 aa20.93■□□□□ 0.94
NSMCE1-201ENST00000361439 DUOX2Q9NRD8 1548 aa20.93■□□□□ 0.94
NSMCE1-201ENST00000361439 ERBINQ96RT1 1412 aa20.9■□□□□ 0.94
NSMCE1-201ENST00000361439 ITGAEP38570 1179 aa20.9■□□□□ 0.94
NSMCE1-201ENST00000361439 RRP7BPQ9NSQ0 103 aa20.9■□□□□ 0.94
NSMCE1-201ENST00000361439 ARID4BQ4LE39 1312 aaPredicted RBP20.89■□□□□ 0.93
NSMCE1-201ENST00000361439 PPP6R1Q9UPN7 881 aa20.87■□□□□ 0.93
NSMCE1-201ENST00000361439 BCORL1Q5H9F3 1711 aa20.85■□□□□ 0.93
NSMCE1-201ENST00000361439 EIF2AK4Q9P2K8 1649 aaKnown RBP20.85■□□□□ 0.93
NSMCE1-201ENST00000361439 ANKRD50Q9ULJ7 1429 aa20.84■□□□□ 0.93
NSMCE1-201ENST00000361439 HFM1A2PYH4 1435 aa20.83■□□□□ 0.93
NSMCE1-201ENST00000361439 SIGLEC1Q9BZZ2 1709 aa20.82■□□□□ 0.92
NSMCE1-201ENST00000361439 KIF3BO15066 747 aa20.81■□□□□ 0.92
NSMCE1-201ENST00000361439 TRIM26Q12899 539 aaPredicted RBP20.8■□□□□ 0.92
NSMCE1-201ENST00000361439 NAIPQ13075 1403 aa20.79■□□□□ 0.92
NSMCE1-201ENST00000361439 FAM135AQ9P2D6 1515 aa20.79■□□□□ 0.92
NSMCE1-201ENST00000361439 ACIN1Q9UKV3 1341 aaKnown RBP20.78■□□□□ 0.92
NSMCE1-201ENST00000361439 RNF17Q9BXT8 1623 aaKnown RBP20.77■□□□□ 0.92
NSMCE1-201ENST00000361439 ADAMTSL3P82987 1691 aa20.75■□□□□ 0.91
NSMCE1-201ENST00000361439 GGT6Q6P531 493 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms