RNA–Protein interactions for RNA: ENST00000361308.8

LMNA-202, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 1,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-202ENST00000361308 PREX2Q70Z35 1606 aa25.9■■□□□ 1.74
LMNA-202ENST00000361308 FAM50AQ14320 339 aaKnown RBP25.9■■□□□ 1.74
LMNA-202ENST00000361308 RRBP1Q9P2E9 1410 aaKnown RBP25.9■■□□□ 1.74
LMNA-202ENST00000361308 MAP3K4Q9Y6R4 1608 aa25.89■■□□□ 1.74
LMNA-202ENST00000361308 TRIM26Q12899 539 aaPredicted RBP25.88■■□□□ 1.73
LMNA-202ENST00000361308 CDC42BPBQ9Y5S2 1711 aa25.88■■□□□ 1.73
LMNA-202ENST00000361308 KIF13AQ9H1H9 1805 aa25.88■■□□□ 1.73
LMNA-202ENST00000361308 ARAP3Q8WWN8 1544 aa25.88■■□□□ 1.73
LMNA-202ENST00000361308 ZNF644Q9H582 1327 aaPredicted RBP25.87■■□□□ 1.73
LMNA-202ENST00000361308 FANCAO15360 1455 aa25.85■■□□□ 1.73
LMNA-202ENST00000361308 PTPN23Q9H3S7 1636 aa25.84■■□□□ 1.73
LMNA-202ENST00000361308 TCOF1Q13428 1488 aaKnown RBP25.81■■□□□ 1.72
LMNA-202ENST00000361308 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.81■■□□□ 1.72
LMNA-202ENST00000361308 CAMSAP2Q08AD1 1489 aa25.8■■□□□ 1.72
LMNA-202ENST00000361308 TSPOAP1O95153 1857 aa25.78■■□□□ 1.72
LMNA-202ENST00000361308 TEX14Q8IWB6 1497 aa25.78■■□□□ 1.72
LMNA-202ENST00000361308 HNRNPMP52272 730 aaKnown RBP eCLIP25.77■■□□□ 1.72
LMNA-202ENST00000361308 AKNAQ7Z591 1439 aa25.77■■□□□ 1.72
LMNA-202ENST00000361308 SAMD9LQ8IVG5 1584 aa25.77■■□□□ 1.72
LMNA-202ENST00000361308 PLEKHH2Q8IVE3 1493 aa25.76■■□□□ 1.71
LMNA-202ENST00000361308 NEO1Q92859 1461 aa25.76■■□□□ 1.71
LMNA-202ENST00000361308 ITGAEP38570 1179 aa25.75■■□□□ 1.71
LMNA-202ENST00000361308 KIAA1107Q9UPP5 1409 aa25.75■■□□□ 1.71
LMNA-202ENST00000361308 CFAP74Q9C0B2 1584 aa25.74■■□□□ 1.71
LMNA-202ENST00000361308 RSPH4AQ5TD94 716 aa25.74■■□□□ 1.71
LMNA-202ENST00000361308 ADGRL1O94910 1474 aa25.73■■□□□ 1.71
LMNA-202ENST00000361308 PPRC1Q5VV67 1664 aaKnown RBP25.72■■□□□ 1.71
LMNA-202ENST00000361308 SCAPERQ9BY12 1400 aa25.71■■□□□ 1.71
LMNA-202ENST00000361308 MBD5Q9P267 1494 aa25.69■■□□□ 1.7
LMNA-202ENST00000361308 ABCC1P33527 1531 aa25.69■■□□□ 1.7
LMNA-202ENST00000361308 SYCP2Q9BX26 1530 aa25.69■■□□□ 1.7
LMNA-202ENST00000361308 PCGF6Q9BYE7 350 aa25.68■■□□□ 1.7
LMNA-202ENST00000361308 ARHGEF12Q9NZN5 1544 aa25.68■■□□□ 1.7
LMNA-202ENST00000361308 TSPY4P0CV99 314 aa25.67■■□□□ 1.7
LMNA-202ENST00000361308 TSPY10P0CW01 314 aa25.67■■□□□ 1.7
LMNA-202ENST00000361308 ABCC5O15440 1437 aa25.65■■□□□ 1.7
LMNA-202ENST00000361308 DAPK1P53355 1430 aa25.65■■□□□ 1.7
LMNA-202ENST00000361308 AFAP1Q8N556 730 aa25.65■■□□□ 1.7
LMNA-202ENST00000361308 TRAPPC8Q9Y2L5 1435 aa25.63■■□□□ 1.69
LMNA-202ENST00000361308 ARHGEF5Q12774 1597 aa25.63■■□□□ 1.69
LMNA-202ENST00000361308 CCDC141Q6ZP82 1450 aa25.63■■□□□ 1.69
LMNA-202ENST00000361308 DNMT1P26358 1616 aaKnown RBP25.62■■□□□ 1.69
LMNA-202ENST00000361308 DENND4BO75064 1496 aaPredicted RBP25.61■■□□□ 1.69
LMNA-202ENST00000361308 CHIC2Q9UKJ5 165 aa25.61■■□□□ 1.69
LMNA-202ENST00000361308 RAPGEF3O95398 923 aa25.6■■□□□ 1.69
LMNA-202ENST00000361308 PTPRKQ15262 1439 aa25.59■■□□□ 1.69
LMNA-202ENST00000361308 ZNF518AQ6AHZ1 1483 aa25.58■■□□□ 1.68
LMNA-202ENST00000361308 POGZQ7Z3K3 1410 aa25.57■■□□□ 1.68
LMNA-202ENST00000361308 SPAG9O60271 1321 aaKnown RBP25.56■■□□□ 1.68
LMNA-202ENST00000361308 MYT1LQ9UL68 1186 aa25.56■■□□□ 1.68
LMNA-202ENST00000361308 C9orf84Q5VXU9 1444 aa25.54■■□□□ 1.68
LMNA-202ENST00000361308 SHANK2Q9UPX8 1470 aa25.53■■□□□ 1.68
LMNA-202ENST00000361308 COL17A1Q9UMD9 1497 aaPredicted RBP25.52■■□□□ 1.68
LMNA-202ENST00000361308 RRP7BPQ9NSQ0 103 aa25.5■■□□□ 1.67
LMNA-202ENST00000361308 CROCC2H7BZ55 1655 aa25.5■■□□□ 1.67
LMNA-202ENST00000361308 ANKRD30AQ9BXX3 1397 aa25.5■■□□□ 1.67
LMNA-202ENST00000361308 ROCK1Q13464 1354 aa25.49■■□□□ 1.67
LMNA-202ENST00000361308 RTEL1-TNFRSF6BF6WH68 1400 aa25.49■■□□□ 1.67
LMNA-202ENST00000361308 KDM5CP41229 1560 aa25.47■■□□□ 1.67
LMNA-202ENST00000361308 RICTORQ6R327 1708 aa25.47■■□□□ 1.67
LMNA-202ENST00000361308 NCOA1Q15788 1441 aa25.47■■□□□ 1.67
LMNA-202ENST00000361308 MAST1Q9Y2H9 1570 aa25.46■■□□□ 1.67
LMNA-202ENST00000361308 ADGRL2O95490 1459 aa25.45■■□□□ 1.66
LMNA-202ENST00000361308 MLH3Q9UHC1 1453 aa25.45■■□□□ 1.66
LMNA-202ENST00000361308 FRMPD1Q5SYB0 1578 aa25.44■■□□□ 1.66
LMNA-202ENST00000361308 KDM6BO15054 1643 aa25.43■■□□□ 1.66
LMNA-202ENST00000361308 ATP7AQ04656 1500 aa25.42■■□□□ 1.66
LMNA-202ENST00000361308 ZFYVE16Q7Z3T8 1539 aa25.41■■□□□ 1.66
LMNA-202ENST00000361308 ADGBQ8N7X0 1667 aa25.4■■□□□ 1.66
LMNA-202ENST00000361308 HFM1A2PYH4 1435 aa25.4■■□□□ 1.66
LMNA-202ENST00000361308 KIF15Q9NS87 1388 aa25.4■■□□□ 1.66
LMNA-202ENST00000361308 HECW2Q9P2P5 1572 aa25.4■■□□□ 1.66
LMNA-202ENST00000361308 INO80Q9ULG1 1556 aaPredicted RBP25.39■■□□□ 1.66
LMNA-202ENST00000361308 ZMYM4Q5VZL5 1548 aa25.39■■□□□ 1.66
LMNA-202ENST00000361308 MAGI2Q86UL8 1455 aa25.39■■□□□ 1.66
LMNA-202ENST00000361308 NAIPQ13075 1403 aa25.38■■□□□ 1.65
LMNA-202ENST00000361308 KIDINS220Q9ULH0 1771 aa25.38■■□□□ 1.65
LMNA-202ENST00000361308 SETD5Q9C0A6 1442 aa25.37■■□□□ 1.65
LMNA-202ENST00000361308 PLXNC1O60486 1568 aa25.36■■□□□ 1.65
LMNA-202ENST00000361308 YEATS2Q9ULM3 1422 aa25.34■■□□□ 1.65
LMNA-202ENST00000361308 ANKRD50Q9ULJ7 1429 aa25.32■■□□□ 1.64
LMNA-202ENST00000361308 DUOX2Q9NRD8 1548 aa25.31■■□□□ 1.64
LMNA-202ENST00000361308 DHX29Q7Z478 1369 aaKnown RBP25.3■■□□□ 1.64
LMNA-202ENST00000361308 RAB3GAP2Q9H2M9 1393 aa25.3■■□□□ 1.64
LMNA-202ENST00000361308 A2MP01023 1474 aa25.28■■□□□ 1.64
LMNA-202ENST00000361308 GCC2Q8IWJ2 1684 aa25.28■■□□□ 1.64
LMNA-202ENST00000361308 ATP10AO60312 1499 aa25.28■■□□□ 1.64
LMNA-202ENST00000361308 ABCA6Q8N139 1617 aa25.27■■□□□ 1.64
LMNA-202ENST00000361308 HRCP23327 699 aa25.27■■□□□ 1.64
LMNA-202ENST00000361308 DIP2CQ9Y2E4 1556 aa25.27■■□□□ 1.64
LMNA-202ENST00000361308 ERBINQ96RT1 1412 aa25.26■■□□□ 1.63
LMNA-202ENST00000361308 KIF3BO15066 747 aa25.22■■□□□ 1.63
LMNA-202ENST00000361308 ACIN1Q9UKV3 1341 aaKnown RBP25.21■■□□□ 1.63
LMNA-202ENST00000361308 ARHGEF40Q8TER5 1519 aa25.21■■□□□ 1.63
LMNA-202ENST00000361308 TRIM52Q96A61 297 aa25.2■■□□□ 1.62
LMNA-202ENST00000361308 REREQ9P2R6 1566 aa25.15■■□□□ 1.62
LMNA-202ENST00000361308 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.15■■□□□ 1.622e-8■■■□□ 16.1
LMNA-202ENST00000361308 ARID4BQ4LE39 1312 aaPredicted RBP25.14■■□□□ 1.61
LMNA-202ENST00000361308 GGT6Q6P531 493 aa25.13■■□□□ 1.61
LMNA-202ENST00000361308 EIF2AK4Q9P2K8 1649 aaKnown RBP25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms