RNA–Protein interactions for RNA: ENST00000361303.7

LDLRAD4-202, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best)

Gene LDLRAD4, Length 8,086 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-202ENST00000361303 TAOK2Q9UL54 1235 aa13.75□□□□□ -0.21
LDLRAD4-202ENST00000361303 DNTTIP2Q5QJE6 756 aaKnown RBP13.75□□□□□ -0.21
LDLRAD4-202ENST00000361303 MIER1Q8N108 512 aa13.75□□□□□ -0.21
LDLRAD4-202ENST00000361303 CCDC9Q9Y3X0 531 aaKnown RBP13.73□□□□□ -0.21
LDLRAD4-202ENST00000361303 IPO8O15397 1037 aaKnown RBP13.73□□□□□ -0.21
LDLRAD4-202ENST00000361303 L1TD1Q5T7N2 865 aaKnown RBP13.73□□□□□ -0.21
LDLRAD4-202ENST00000361303 HDAC5Q9UQL6 1122 aa13.73□□□□□ -0.21
LDLRAD4-202ENST00000361303 STK26Q9P289 416 aa13.72□□□□□ -0.21
LDLRAD4-202ENST00000361303 TPRNQ4KMQ1 711 aa13.72□□□□□ -0.21
LDLRAD4-202ENST00000361303 FMN1Q68DA7 1419 aa13.72□□□□□ -0.21
LDLRAD4-202ENST00000361303 GNL2Q13823 731 aaKnown RBP13.72□□□□□ -0.21
LDLRAD4-202ENST00000361303 SAFB2Q14151 953 aaKnown RBP eCLIP13.72□□□□□ -0.21
LDLRAD4-202ENST00000361303 SPAG9O60271 1321 aaKnown RBP13.71□□□□□ -0.21
LDLRAD4-202ENST00000361303 TIMELESSQ9UNS1 1208 aa13.71□□□□□ -0.22
LDLRAD4-202ENST00000361303 SOGA1O94964 1423 aa13.7□□□□□ -0.22
LDLRAD4-202ENST00000361303 KIAA1211Q6ZU35 1233 aa13.69□□□□□ -0.22
LDLRAD4-202ENST00000361303 ANKRD30AQ9BXX3 1397 aa13.69□□□□□ -0.22
LDLRAD4-202ENST00000361303 KTN1Q86UP2 1357 aaKnown RBP13.69□□□□□ -0.22
LDLRAD4-202ENST00000361303 G3V3G9 751 aa13.68□□□□□ -0.22
LDLRAD4-202ENST00000361303 DCAF8Q5TAQ9 597 aa13.68□□□□□ -0.22
LDLRAD4-202ENST00000361303 HSCBQ8IWL3 235 aa13.68□□□□□ -0.22
LDLRAD4-202ENST00000361303 RGS3P49796 1198 aa13.67□□□□□ -0.22
LDLRAD4-202ENST00000361303 GPATCH3Q96I76 525 aa13.67□□□□□ -0.22
LDLRAD4-202ENST00000361303 RSPH4AQ5TD94 716 aa13.66□□□□□ -0.22
LDLRAD4-202ENST00000361303 ROCK2O75116 1388 aaKnown RBP13.66□□□□□ -0.22
LDLRAD4-202ENST00000361303 TERF2IPQ9NYB0 399 aa13.66□□□□□ -0.22
LDLRAD4-202ENST00000361303 PLCB2Q00722 1185 aa13.66□□□□□ -0.22
LDLRAD4-202ENST00000361303 ZNF330Q9Y3S2 320 aaPredicted RBP13.66□□□□□ -0.22
LDLRAD4-202ENST00000361303 KIAA2012Q0VF49 1180 aa13.65□□□□□ -0.22
LDLRAD4-202ENST00000361303 PPP4R2Q9NY27 417 aa13.65□□□□□ -0.22
LDLRAD4-202ENST00000361303 SUPT16HQ9Y5B9 1047 aaKnown RBP13.65□□□□□ -0.22
LDLRAD4-202ENST00000361303 SETD5Q9C0A6 1442 aa13.65□□□□□ -0.22
LDLRAD4-202ENST00000361303 CHAF1AQ13111 956 aaPredicted RBP13.64□□□□□ -0.23
LDLRAD4-202ENST00000361303 TAF7LQ5H9L4 462 aa13.64□□□□□ -0.23
LDLRAD4-202ENST00000361303 GORABQ5T7V8 394 aa13.64□□□□□ -0.23
LDLRAD4-202ENST00000361303 PKD2Q13563 968 aa13.64□□□□□ -0.23
LDLRAD4-202ENST00000361303 STK31Q9BXU1 1019 aa13.63□□□□□ -0.23
LDLRAD4-202ENST00000361303 CCDC18Q5T9S5 1454 aa13.63□□□□□ -0.23
LDLRAD4-202ENST00000361303 HTATSF1O43719 755 aaKnown RBP13.62□□□□□ -0.23
LDLRAD4-202ENST00000361303 SIN3AQ96ST3 1273 aa13.62□□□□□ -0.23
LDLRAD4-202ENST00000361303 CECR2Q9BXF3 1484 aa13.62□□□□□ -0.23
LDLRAD4-202ENST00000361303 NGDNQ8NEJ9 315 aaKnown RBP13.62□□□□□ -0.23
LDLRAD4-202ENST00000361303 WASHC2CQ9Y4E1 1318 aa13.61□□□□□ -0.23
LDLRAD4-202ENST00000361303 NUP155O75694 1391 aa13.61□□□□□ -0.23
LDLRAD4-202ENST00000361303 CCDC34Q96HJ3 373 aa13.61□□□□□ -0.23
LDLRAD4-202ENST00000361303 LMOD3Q0VAK6 560 aa13.6□□□□□ -0.23
LDLRAD4-202ENST00000361303 NCBP3Q53F19 620 aaKnown RBP13.59□□□□□ -0.23
LDLRAD4-202ENST00000361303 KIF3BO15066 747 aa13.59□□□□□ -0.23
LDLRAD4-202ENST00000361303 U2AF1L5P0DN76 240 aaPredicted RBP13.59□□□□□ -0.23
LDLRAD4-202ENST00000361303 U2AF1Q01081 240 aaKnown RBP eCLIP13.59□□□□□ -0.23
LDLRAD4-202ENST00000361303 SENP3-EIF4A1A0A087X0R7 540 aa13.59□□□□□ -0.23
LDLRAD4-202ENST00000361303 ERICH6BQ5W0A0 696 aa13.59□□□□□ -0.23
LDLRAD4-202ENST00000361303 PTMSP20962 102 aa13.58□□□□□ -0.24
LDLRAD4-202ENST00000361303 UACAQ9BZF9 1416 aa13.58□□□□□ -0.24
LDLRAD4-202ENST00000361303 CHMP3Q9Y3E7 222 aa13.58□□□□□ -0.24
LDLRAD4-202ENST00000361303 RALBP1Q15311 655 aa13.58□□□□□ -0.24
LDLRAD4-202ENST00000361303 AMPHP49418 695 aa13.57□□□□□ -0.24
LDLRAD4-202ENST00000361303 GTF2E1P29083 439 aaPredicted RBP13.56□□□□□ -0.24
LDLRAD4-202ENST00000361303 HMMRO75330 724 aa13.56□□□□□ -0.24
LDLRAD4-202ENST00000361303 AEBP2Q6ZN18 517 aaPredicted RBP13.56□□□□□ -0.24
LDLRAD4-202ENST00000361303 DRC7Q8IY82 874 aa13.56□□□□□ -0.24
LDLRAD4-202ENST00000361303 VPS8Q8N3P4 1428 aa13.56□□□□□ -0.24
LDLRAD4-202ENST00000361303 ABCC8Q09428 1581 aa13.54□□□□□ -0.24
LDLRAD4-202ENST00000361303 CCDC88BA6NC98 1476 aa13.54□□□□□ -0.24
LDLRAD4-202ENST00000361303 RWDD1Q9H446 243 aaPredicted RBP13.54□□□□□ -0.24
LDLRAD4-202ENST00000361303 TDRD9Q8NDG6 1382 aaKnown RBP13.53□□□□□ -0.24
LDLRAD4-202ENST00000361303 ITPRIPQ8IWB1 547 aa13.53□□□□□ -0.24
LDLRAD4-202ENST00000361303 EVA1CP58658 441 aa13.52□□□□□ -0.24
LDLRAD4-202ENST00000361303 TPM4P67936 248 aa13.52□□□□□ -0.25
LDLRAD4-202ENST00000361303 FRAT2O75474 233 aaPredicted RBP13.52□□□□□ -0.25
LDLRAD4-202ENST00000361303 CCER2I3L3R5 266 aa13.52□□□□□ -0.25
LDLRAD4-202ENST00000361303 MPHOSPH9Q99550 1183 aa13.51□□□□□ -0.25
LDLRAD4-202ENST00000361303 APBB1O00213 710 aa13.5□□□□□ -0.25
LDLRAD4-202ENST00000361303 TOP2AP11388 1531 aaKnown RBP13.5□□□□□ -0.25
LDLRAD4-202ENST00000361303 MEX3CQ5U5Q3 659 aaKnown RBP13.5□□□□□ -0.25
LDLRAD4-202ENST00000361303 PMFBP1Q8TBY8 1022 aa13.49□□□□□ -0.25
LDLRAD4-202ENST00000361303 RAPGEF2Q9Y4G8 1499 aa13.49□□□□□ -0.25
LDLRAD4-202ENST00000361303 HSPA5P11021 654 aaKnown RBP13.49□□□□□ -0.25
LDLRAD4-202ENST00000361303 SYAP1Q96A49 352 aaPredicted RBP13.49□□□□□ -0.25
LDLRAD4-202ENST00000361303 C1orf141Q5JVX7 400 aa13.48□□□□□ -0.25
LDLRAD4-202ENST00000361303 CSPP1Q1MSJ5 1256 aa13.48□□□□□ -0.25
LDLRAD4-202ENST00000361303 HSP90B1P14625 803 aaKnown RBP13.48□□□□□ -0.25
LDLRAD4-202ENST00000361303 HNRNPMP52272 730 aaKnown RBP eCLIP13.47□□□□□ -0.25
LDLRAD4-202ENST00000361303 GBP4Q96PP9 640 aa13.47□□□□□ -0.25
LDLRAD4-202ENST00000361303 NOC3LQ8WTT2 800 aaKnown RBP13.47□□□□□ -0.25
LDLRAD4-202ENST00000361303 MSNP26038 577 aaKnown RBP13.47□□□□□ -0.25
LDLRAD4-202ENST00000361303 KIF3AQ9Y496 699 aa13.47□□□□□ -0.25
LDLRAD4-202ENST00000361303 CADPSQ9ULU8 1353 aa13.47□□□□□ -0.25
LDLRAD4-202ENST00000361303 NOP58Q9Y2X3 529 aaKnown RBP13.47□□□□□ -0.25
LDLRAD4-202ENST00000361303 MYO15BQ96JP2 1530 aa13.46□□□□□ -0.25
LDLRAD4-202ENST00000361303 CHMP4CQ96CF2 233 aa13.46□□□□□ -0.25
LDLRAD4-202ENST00000361303 RASSF8Q8NHQ8 419 aa13.46□□□□□ -0.26
LDLRAD4-202ENST00000361303 SMC4Q9NTJ3 1288 aa13.46□□□□□ -0.26
LDLRAD4-202ENST00000361303 PHLDB1Q86UU1 1377 aa13.46□□□□□ -0.26
LDLRAD4-202ENST00000361303 TRIM6-TRIM34B2RNG4 842 aa13.45□□□□□ -0.26
LDLRAD4-202ENST00000361303 JPH4Q96JJ6 628 aa13.45□□□□□ -0.26
LDLRAD4-202ENST00000361303 LRRFIP1Q32MZ4 808 aaKnown RBP13.45□□□□□ -0.26
LDLRAD4-202ENST00000361303 OSCARQ8IYS5 282 aa13.44□□□□□ -0.26
LDLRAD4-202ENST00000361303 VGFO15240 615 aaPredicted RBP13.44□□□□□ -0.26
LDLRAD4-202ENST00000361303 PRM3Q9NNZ6 103 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms