RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 ARHGAP5Q13017 1502 aa27.75■■■□□ 2.03
CLK2-202ENST00000361168 CFDP1Q9UEE9 299 aaPredicted RBP27.75■■■□□ 2.03
CLK2-202ENST00000361168 PREX2Q70Z35 1606 aa27.75■■■□□ 2.03
CLK2-202ENST00000361168 EFCAB2Q5VUJ9 269 aa27.71■■■□□ 2.03
CLK2-202ENST00000361168 MYOM3Q5VTT5 1437 aa27.7■■■□□ 2.03
CLK2-202ENST00000361168 COL17A1Q9UMD9 1497 aaPredicted RBP27.7■■■□□ 2.03
CLK2-202ENST00000361168 TEX14Q8IWB6 1497 aa27.7■■■□□ 2.02
CLK2-202ENST00000361168 AKNAQ7Z591 1439 aa27.68■■■□□ 2.02
CLK2-202ENST00000361168 ARAP3Q8WWN8 1544 aa27.67■■■□□ 2.02
CLK2-202ENST00000361168 NEO1Q92859 1461 aa27.65■■■□□ 2.02
CLK2-202ENST00000361168 SAMD9LQ8IVG5 1584 aa27.64■■■□□ 2.02
CLK2-202ENST00000361168 ITSN2Q9NZM3 1697 aa27.64■■■□□ 2.02
CLK2-202ENST00000361168 RAPGEF3O95398 923 aa27.63■■■□□ 2.01
CLK2-202ENST00000361168 ARHGEF12Q9NZN5 1544 aa27.63■■■□□ 2.01
CLK2-202ENST00000361168 ADGRL1O94910 1474 aa27.62■■■□□ 2.01
CLK2-202ENST00000361168 HNRNPMP52272 730 aaKnown RBP eCLIP27.61■■■□□ 2.01
CLK2-202ENST00000361168 FGD6Q6ZV73 1430 aa27.61■■■□□ 2.01
CLK2-202ENST00000361168 SCAPERQ9BY12 1400 aa27.6■■■□□ 2.01
CLK2-202ENST00000361168 CAMSAP2Q08AD1 1489 aa27.58■■■□□ 2.01
CLK2-202ENST00000361168 MIA2Q96PC5 1412 aa27.57■■■□□ 2
CLK2-202ENST00000361168 AFAP1Q8N556 730 aa27.57■■■□□ 2
CLK2-202ENST00000361168 ABCC1P33527 1531 aa27.56■■■□□ 2
CLK2-202ENST00000361168 SYCP2Q9BX26 1530 aa27.56■■■□□ 2
CLK2-202ENST00000361168 CFAP74Q9C0B2 1584 aa27.55■■■□□ 2
CLK2-202ENST00000361168 TRAPPC8Q9Y2L5 1435 aa27.55■■■□□ 2
CLK2-202ENST00000361168 KDM6BO15054 1643 aa27.53■■■□□ 2
CLK2-202ENST00000361168 PTPN23Q9H3S7 1636 aa27.53■■■□□ 2
CLK2-202ENST00000361168 FAM50AQ14320 339 aaKnown RBP27.53■■■□□ 2
CLK2-202ENST00000361168 MBD5Q9P267 1494 aa27.52■■■□□ 2
CLK2-202ENST00000361168 DENND4BO75064 1496 aaPredicted RBP27.51■■□□□ 1.99
CLK2-202ENST00000361168 FRMPD1Q5SYB0 1578 aa27.49■■□□□ 1.99
CLK2-202ENST00000361168 POGZQ7Z3K3 1410 aa27.49■■□□□ 1.99
CLK2-202ENST00000361168 KIAA1107Q9UPP5 1409 aa27.49■■□□□ 1.99
CLK2-202ENST00000361168 TCOF1Q13428 1488 aaKnown RBP27.47■■□□□ 1.99
CLK2-202ENST00000361168 RICTORQ6R327 1708 aa27.45■■□□□ 1.98
CLK2-202ENST00000361168 RRBP1Q9P2E9 1410 aaKnown RBP27.44■■□□□ 1.98
CLK2-202ENST00000361168 PLEKHH2Q8IVE3 1493 aa27.44■■□□□ 1.98
CLK2-202ENST00000361168 ZNF518AQ6AHZ1 1483 aa27.41■■□□□ 1.98
CLK2-202ENST00000361168 ITGAEP38570 1179 aa27.4■■□□□ 1.98
CLK2-202ENST00000361168 ABCC5O15440 1437 aa27.38■■□□□ 1.97
CLK2-202ENST00000361168 CCDC141Q6ZP82 1450 aa27.37■■□□□ 1.97
CLK2-202ENST00000361168 KDM5CP41229 1560 aa27.37■■□□□ 1.97
CLK2-202ENST00000361168 PTPRKQ15262 1439 aa27.36■■□□□ 1.97
CLK2-202ENST00000361168 YEATS2Q9ULM3 1422 aa27.36■■□□□ 1.97
CLK2-202ENST00000361168 DAPK1P53355 1430 aa27.35■■□□□ 1.97
CLK2-202ENST00000361168 CHIC2Q9UKJ5 165 aa27.35■■□□□ 1.97
CLK2-202ENST00000361168 MYT1LQ9UL68 1186 aa27.35■■□□□ 1.97
CLK2-202ENST00000361168 ARHGEF5Q12774 1597 aa27.35■■□□□ 1.97
CLK2-202ENST00000361168 SPAG9O60271 1321 aaKnown RBP27.34■■□□□ 1.97
CLK2-202ENST00000361168 DNMT1P26358 1616 aaKnown RBP27.31■■□□□ 1.96
CLK2-202ENST00000361168 ZMYM4Q5VZL5 1548 aa27.31■■□□□ 1.96
CLK2-202ENST00000361168 RSPH4AQ5TD94 716 aa27.31■■□□□ 1.96
CLK2-202ENST00000361168 TSPY4P0CV99 314 aa27.3■■□□□ 1.96
CLK2-202ENST00000361168 TSPY10P0CW01 314 aa27.3■■□□□ 1.96
CLK2-202ENST00000361168 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.29■■□□□ 1.962e-7■□□□□ 8.8
CLK2-202ENST00000361168 MLH3Q9UHC1 1453 aa27.29■■□□□ 1.96
CLK2-202ENST00000361168 KIDINS220Q9ULH0 1771 aa27.28■■□□□ 1.96
CLK2-202ENST00000361168 C9orf84Q5VXU9 1444 aa27.28■■□□□ 1.96
CLK2-202ENST00000361168 HECW2Q9P2P5 1572 aa27.28■■□□□ 1.96
CLK2-202ENST00000361168 ZFYVE16Q7Z3T8 1539 aa27.27■■□□□ 1.96
CLK2-202ENST00000361168 ATP7AQ04656 1500 aa27.26■■□□□ 1.95
CLK2-202ENST00000361168 INO80Q9ULG1 1556 aaPredicted RBP27.25■■□□□ 1.95
CLK2-202ENST00000361168 CROCC2H7BZ55 1655 aa27.24■■□□□ 1.95
CLK2-202ENST00000361168 ABCA6Q8N139 1617 aa27.23■■□□□ 1.95
CLK2-202ENST00000361168 MAGI2Q86UL8 1455 aa27.22■■□□□ 1.95
CLK2-202ENST00000361168 RRP7BPQ9NSQ0 103 aa27.21■■□□□ 1.95
CLK2-202ENST00000361168 RTEL1-TNFRSF6BF6WH68 1400 aa27.2■■□□□ 1.95
CLK2-202ENST00000361168 DIP2CQ9Y2E4 1556 aa27.2■■□□□ 1.94
CLK2-202ENST00000361168 SHANK2Q9UPX8 1470 aa27.2■■□□□ 1.94
CLK2-202ENST00000361168 ARHGEF40Q8TER5 1519 aa27.18■■□□□ 1.94
CLK2-202ENST00000361168 MAST1Q9Y2H9 1570 aa27.17■■□□□ 1.94
CLK2-202ENST00000361168 SIGLEC1Q9BZZ2 1709 aa27.17■■□□□ 1.94
CLK2-202ENST00000361168 NCOA1Q15788 1441 aa27.16■■□□□ 1.94
CLK2-202ENST00000361168 ATP10AO60312 1499 aa27.14■■□□□ 1.94
CLK2-202ENST00000361168 KIF15Q9NS87 1388 aa27.12■■□□□ 1.93
CLK2-202ENST00000361168 ADGRL2O95490 1459 aa27.1■■□□□ 1.93
CLK2-202ENST00000361168 ANKRD30AQ9BXX3 1397 aa27.1■■□□□ 1.93
CLK2-202ENST00000361168 ADGBQ8N7X0 1667 aa27.1■■□□□ 1.93
CLK2-202ENST00000361168 A2MP01023 1474 aa27.09■■□□□ 1.93
CLK2-202ENST00000361168 PLXNC1O60486 1568 aa27.08■■□□□ 1.93
CLK2-202ENST00000361168 ARID4BQ4LE39 1312 aaPredicted RBP27.07■■□□□ 1.92
CLK2-202ENST00000361168 DHX29Q7Z478 1369 aaKnown RBP27.07■■□□□ 1.92
CLK2-202ENST00000361168 TRIM26Q12899 539 aaPredicted RBP27.06■■□□□ 1.92
CLK2-202ENST00000361168 ROCK1Q13464 1354 aa27.05■■□□□ 1.92
CLK2-202ENST00000361168 MLECQ14165 292 aa27.04■■□□□ 1.92
CLK2-202ENST00000361168 NAIPQ13075 1403 aa27.01■■□□□ 1.91
CLK2-202ENST00000361168 KIF3BO15066 747 aa27■■□□□ 1.91
CLK2-202ENST00000361168 DUOX2Q9NRD8 1548 aa27■■□□□ 1.91
CLK2-202ENST00000361168 REREQ9P2R6 1566 aa26.99■■□□□ 1.91
CLK2-202ENST00000361168 ANKRD50Q9ULJ7 1429 aa26.98■■□□□ 1.91
CLK2-202ENST00000361168 GGT6Q6P531 493 aa26.96■■□□□ 1.91
CLK2-202ENST00000361168 HFM1A2PYH4 1435 aa26.96■■□□□ 1.91
CLK2-202ENST00000361168 AGLP35573 1532 aa26.93■■□□□ 1.9
CLK2-202ENST00000361168 ERBINQ96RT1 1412 aa26.93■■□□□ 1.9
CLK2-202ENST00000361168 PCGF6Q9BYE7 350 aa26.9■■□□□ 1.9
CLK2-202ENST00000361168 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.89■■□□□ 1.92e-7■■■□□ 15
CLK2-202ENST00000361168 GCC2Q8IWJ2 1684 aa26.87■■□□□ 1.89
CLK2-202ENST00000361168 KDM4FA0A1W2PPD8 638 aa26.86■■□□□ 1.89
CLK2-202ENST00000361168 BCORL1Q5H9F3 1711 aa26.86■■□□□ 1.89
CLK2-202ENST00000361168 MROH1Q8NDA8 1641 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms