RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 TIMELESSQ9UNS1 1208 aa15.61■□□□□ 0.09
CCDC144A-204ENST00000360524 FGD1P98174 961 aa15.61■□□□□ 0.09
CCDC144A-204ENST00000360524 HSCBQ8IWL3 235 aa15.61■□□□□ 0.09
CCDC144A-204ENST00000360524 SETD5Q9C0A6 1442 aa15.6■□□□□ 0.09
CCDC144A-204ENST00000360524 KCNJ4P48050 445 aa15.6■□□□□ 0.09
CCDC144A-204ENST00000360524 TSHZ2Q9NRE2 1034 aa15.6■□□□□ 0.09
CCDC144A-204ENST00000360524 CHAF1AQ13111 956 aaPredicted RBP15.59■□□□□ 0.09
CCDC144A-204ENST00000360524 SOX12O15370 315 aa15.59■□□□□ 0.09
CCDC144A-204ENST00000360524 MORC1Q86VD1 984 aa15.58■□□□□ 0.09
CCDC144A-204ENST00000360524 CCDC88BA6NC98 1476 aa15.58■□□□□ 0.09
CCDC144A-204ENST00000360524 PDS5BQ9NTI5 1447 aa15.58■□□□□ 0.08
CCDC144A-204ENST00000360524 GGT6Q6P531 493 aa15.58■□□□□ 0.08
CCDC144A-204ENST00000360524 ARID3AQ99856 593 aa15.58■□□□□ 0.08
CCDC144A-204ENST00000360524 SMARCA2P51531 1590 aa15.57■□□□□ 0.08
CCDC144A-204ENST00000360524 VPS8Q8N3P4 1428 aa15.57■□□□□ 0.08
CCDC144A-204ENST00000360524 GOLGA6L6A8MZA4 724 aa15.56■□□□□ 0.08
CCDC144A-204ENST00000360524 SAFB2Q14151 953 aaKnown RBP eCLIP15.56■□□□□ 0.08
CCDC144A-204ENST00000360524 PKD2Q13563 968 aa15.56■□□□□ 0.08
CCDC144A-204ENST00000360524 APBB1O00213 710 aa15.54■□□□□ 0.08
CCDC144A-204ENST00000360524 HSPA5P11021 654 aaKnown RBP15.54■□□□□ 0.08
CCDC144A-204ENST00000360524 ABCC8Q09428 1581 aa15.53■□□□□ 0.08
CCDC144A-204ENST00000360524 MROH2BQ7Z745 1585 aa15.53■□□□□ 0.08
CCDC144A-204ENST00000360524 FOXD1Q16676 465 aa15.52■□□□□ 0.08
CCDC144A-204ENST00000360524 DRC7Q8IY82 874 aa15.52■□□□□ 0.08
CCDC144A-204ENST00000360524 GOLGA6L4A6NEF3 574 aa15.52■□□□□ 0.08
CCDC144A-204ENST00000360524 HDGFL2Q7Z4V5 671 aaPredicted RBP15.52■□□□□ 0.08
CCDC144A-204ENST00000360524 STK26Q9P289 416 aa15.52■□□□□ 0.08
CCDC144A-204ENST00000360524 GZF1Q9H116 711 aaPredicted RBP15.51■□□□□ 0.07
CCDC144A-204ENST00000360524 FMN1Q68DA7 1419 aa15.51■□□□□ 0.07
CCDC144A-204ENST00000360524 GOLGA2Q08379 1002 aa15.5■□□□□ 0.07
CCDC144A-204ENST00000360524 KTN1Q86UP2 1357 aaKnown RBP15.5■□□□□ 0.07
CCDC144A-204ENST00000360524 VSIG10Q8N0Z9 540 aa15.5■□□□□ 0.07
CCDC144A-204ENST00000360524 KANK4Q5T7N3 995 aaPredicted RBP15.49■□□□□ 0.07
CCDC144A-204ENST00000360524 RTF1Q92541 710 aaKnown RBP15.49■□□□□ 0.07
CCDC144A-204ENST00000360524 EFCAB2Q5VUJ9 269 aa15.49■□□□□ 0.07
CCDC144A-204ENST00000360524 CCER2I3L3R5 266 aa15.49■□□□□ 0.07
CCDC144A-204ENST00000360524 TDRD9Q8NDG6 1382 aaKnown RBP15.49■□□□□ 0.07
CCDC144A-204ENST00000360524 TNNT3P45378 269 aaPredicted RBP15.48■□□□□ 0.07
CCDC144A-204ENST00000360524 HSP90AA2PQ14568 343 aaPredicted RBP15.48■□□□□ 0.07
CCDC144A-204ENST00000360524 ANKRD30AQ9BXX3 1397 aa15.48■□□□□ 0.07
CCDC144A-204ENST00000360524 ROCK2O75116 1388 aaKnown RBP15.47■□□□□ 0.07
CCDC144A-204ENST00000360524 NUP155O75694 1391 aa15.46■□□□□ 0.07
CCDC144A-204ENST00000360524 SLKQ9H2G2 1235 aaPredicted RBP15.46■□□□□ 0.07
CCDC144A-204ENST00000360524 MPHOSPH9Q99550 1183 aa15.46■□□□□ 0.07
CCDC144A-204ENST00000360524 MCCP23508 829 aa15.45■□□□□ 0.06
CCDC144A-204ENST00000360524 NRDCO43847 1150 aa15.45■□□□□ 0.06
CCDC144A-204ENST00000360524 RSPH6AQ9H0K4 717 aa15.45■□□□□ 0.06
CCDC144A-204ENST00000360524 RAB3GAP2Q9H2M9 1393 aa15.42■□□□□ 0.06
CCDC144A-204ENST00000360524 PAK3O75914 559 aaPredicted RBP15.42■□□□□ 0.06
CCDC144A-204ENST00000360524 EIF3AQ14152 1382 aaKnown RBP15.42■□□□□ 0.06
CCDC144A-204ENST00000360524 CLSTN1O94985 981 aa15.42■□□□□ 0.06
CCDC144A-204ENST00000360524 ITPRIPQ8IWB1 547 aa15.42■□□□□ 0.06
CCDC144A-204ENST00000360524 RCAN3Q9UKA8 241 aa15.41■□□□□ 0.06
CCDC144A-204ENST00000360524 IPO8O15397 1037 aaKnown RBP15.41■□□□□ 0.06
CCDC144A-204ENST00000360524 CALD1Q05682 793 aaKnown RBP15.41■□□□□ 0.06
CCDC144A-204ENST00000360524 RALBP1Q15311 655 aa15.4■□□□□ 0.06
CCDC144A-204ENST00000360524 CFAP44Q96MT7 982 aa15.4■□□□□ 0.06
CCDC144A-204ENST00000360524 TOP2AP11388 1531 aaKnown RBP15.4■□□□□ 0.06
CCDC144A-204ENST00000360524 IPO9Q96P70 1041 aaKnown RBP15.4■□□□□ 0.06
CCDC144A-204ENST00000360524 U2AF1L5P0DN76 240 aaPredicted RBP15.39■□□□□ 0.05
CCDC144A-204ENST00000360524 U2AF1Q01081 240 aaKnown RBP eCLIP15.39■□□□□ 0.05
CCDC144A-204ENST00000360524 NCBP3Q53F19 620 aaKnown RBP15.39■□□□□ 0.05
CCDC144A-204ENST00000360524 KIF3BO15066 747 aa15.39■□□□□ 0.05
CCDC144A-204ENST00000360524 GOLGA6L3A6NEY3 463 aa15.38■□□□□ 0.05
CCDC144A-204ENST00000360524 GNL2Q13823 731 aaKnown RBP15.38■□□□□ 0.05
CCDC144A-204ENST00000360524 MFAP1P55081 439 aaKnown RBP15.38■□□□□ 0.05
CCDC144A-204ENST00000360524 FOXD4L1Q9NU39 408 aa15.38■□□□□ 0.05
CCDC144A-204ENST00000360524 CSB-PGBD3P0DP91 1061 aa15.38■□□□□ 0.05
CCDC144A-204ENST00000360524 ISY1Q9ULR0 285 aaKnown RBP15.37■□□□□ 0.05
CCDC144A-204ENST00000360524 RAPGEF2Q9Y4G8 1499 aa15.37■□□□□ 0.05
CCDC144A-204ENST00000360524 KIAA2012Q0VF49 1180 aa15.37■□□□□ 0.05
CCDC144A-204ENST00000360524 HNRNPMP52272 730 aaKnown RBP eCLIP15.37■□□□□ 0.05
CCDC144A-204ENST00000360524 GBP4Q96PP9 640 aa15.35■□□□□ 0.05
CCDC144A-204ENST00000360524 CCDC18Q5T9S5 1454 aa15.35■□□□□ 0.05
CCDC144A-204ENST00000360524 CADPSQ9ULU8 1353 aa15.35■□□□□ 0.05
CCDC144A-204ENST00000360524 FHOD3Q2V2M9 1422 aa15.34■□□□□ 0.05
CCDC144A-204ENST00000360524 RSPH4AQ5TD94 716 aa15.34■□□□□ 0.05
CCDC144A-204ENST00000360524 CCDC146Q8IYE0 955 aa15.34■□□□□ 0.05
CCDC144A-204ENST00000360524 SPAG9O60271 1321 aaKnown RBP15.34■□□□□ 0.05
CCDC144A-204ENST00000360524 WIZO95785 1651 aa15.34■□□□□ 0.05
CCDC144A-204ENST00000360524 KIAA1211Q6ZU35 1233 aa15.34■□□□□ 0.05
CCDC144A-204ENST00000360524 NOL8Q76FK4 1167 aaKnown RBP15.33■□□□□ 0.04
CCDC144A-204ENST00000360524 RWDD1Q9H446 243 aaPredicted RBP15.33■□□□□ 0.04
CCDC144A-204ENST00000360524 TERF2IPQ9NYB0 399 aa15.32■□□□□ 0.04
CCDC144A-204ENST00000360524 EID1Q9Y6B2 187 aa15.32■□□□□ 0.04
CCDC144A-204ENST00000360524 PTMSP20962 102 aa15.32■□□□□ 0.04
CCDC144A-204ENST00000360524 WASHC2CQ9Y4E1 1318 aa15.31■□□□□ 0.04
CCDC144A-204ENST00000360524 ZNF330Q9Y3S2 320 aaPredicted RBP15.31■□□□□ 0.04
CCDC144A-204ENST00000360524 TCERG1O14776 1098 aaKnown RBP15.31■□□□□ 0.04
CCDC144A-204ENST00000360524 CHMP4AQ9BY43 222 aa15.3■□□□□ 0.04
CCDC144A-204ENST00000360524 HSP90B1P14625 803 aaKnown RBP15.29■□□□□ 0.04
CCDC144A-204ENST00000360524 CLUAP1Q96AJ1 413 aa15.29■□□□□ 0.04
CCDC144A-204ENST00000360524 NUTM2DQ5VT03 806 aaPredicted RBP15.28■□□□□ 0.04
CCDC144A-204ENST00000360524 STK31Q9BXU1 1019 aa15.28■□□□□ 0.04
CCDC144A-204ENST00000360524 L3MBTL2Q969R5 705 aa15.28■□□□□ 0.04
CCDC144A-204ENST00000360524 FOXD4L5Q5VV16 416 aaPredicted RBP15.27■□□□□ 0.04
CCDC144A-204ENST00000360524 FOXD4L4Q8WXT5 416 aaPredicted RBP15.27■□□□□ 0.04
CCDC144A-204ENST00000360524 USP35Q9P2H5 1018 aa15.27■□□□□ 0.03
CCDC144A-204ENST00000360524 TRIM6-TRIM34B2RNG4 842 aa15.27■□□□□ 0.03
CCDC144A-204ENST00000360524 JPH4Q96JJ6 628 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms