RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 PTPN23Q9H3S7 1636 aa20.14■□□□□ 0.81
CCDC197-201ENST00000359253 KIF14Q15058 1648 aa20.12■□□□□ 0.81
CCDC197-201ENST00000359253 ITSN2Q9NZM3 1697 aa20.11■□□□□ 0.81
CCDC197-201ENST00000359253 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.11■□□□□ 0.81
CCDC197-201ENST00000359253 PLCH2O75038 1416 aa20.1■□□□□ 0.81
CCDC197-201ENST00000359253 TSPOAP1O95153 1857 aa20.09■□□□□ 0.81
CCDC197-201ENST00000359253 PPRC1Q5VV67 1664 aaKnown RBP20.08■□□□□ 0.81
CCDC197-201ENST00000359253 EFCAB2Q5VUJ9 269 aa20.08■□□□□ 0.81
CCDC197-201ENST00000359253 SETD5Q9C0A6 1442 aa20.08■□□□□ 0.8
CCDC197-201ENST00000359253 CLSPNQ9HAW4 1339 aa20.07■□□□□ 0.8
CCDC197-201ENST00000359253 GPATCH8Q9UKJ3 1502 aaKnown RBP20.07■□□□□ 0.8
CCDC197-201ENST00000359253 NEO1Q92859 1461 aa20.06■□□□□ 0.8
CCDC197-201ENST00000359253 ITGAEP38570 1179 aa20.06■□□□□ 0.8
CCDC197-201ENST00000359253 ACIN1Q9UKV3 1341 aaKnown RBP20.05■□□□□ 0.8
CCDC197-201ENST00000359253 ARAP3Q8WWN8 1544 aa20.04■□□□□ 0.8
CCDC197-201ENST00000359253 CFDP1Q9UEE9 299 aaPredicted RBP20.04■□□□□ 0.8
CCDC197-201ENST00000359253 AKNAQ7Z591 1439 aa20.02■□□□□ 0.79
CCDC197-201ENST00000359253 FANCAO15360 1455 aa19.99■□□□□ 0.79
CCDC197-201ENST00000359253 HFM1A2PYH4 1435 aa19.99■□□□□ 0.79
CCDC197-201ENST00000359253 TTC37Q6PGP7 1564 aa19.99■□□□□ 0.79
CCDC197-201ENST00000359253 KDM6BO15054 1643 aa19.98■□□□□ 0.79
CCDC197-201ENST00000359253 RAB3GAP2Q9H2M9 1393 aa19.98■□□□□ 0.79
CCDC197-201ENST00000359253 COL17A1Q9UMD9 1497 aaPredicted RBP19.98■□□□□ 0.79
CCDC197-201ENST00000359253 ROCK1Q13464 1354 aa19.96■□□□□ 0.79
CCDC197-201ENST00000359253 CDC42BPAQ5VT25 1732 aa19.96■□□□□ 0.79
CCDC197-201ENST00000359253 DNMT1P26358 1616 aaKnown RBP19.96■□□□□ 0.79
CCDC197-201ENST00000359253 PTPRKQ15262 1439 aa19.95■□□□□ 0.78
CCDC197-201ENST00000359253 CAMSAP2Q08AD1 1489 aa19.95■□□□□ 0.78
CCDC197-201ENST00000359253 RSPH4AQ5TD94 716 aa19.95■□□□□ 0.78
CCDC197-201ENST00000359253 CFAP74Q9C0B2 1584 aa19.95■□□□□ 0.78
CCDC197-201ENST00000359253 DAPK1P53355 1430 aa19.94■□□□□ 0.78
CCDC197-201ENST00000359253 DHX57Q6P158 1386 aaKnown RBP19.94■□□□□ 0.78
CCDC197-201ENST00000359253 MYO5CQ9NQX4 1742 aa19.93■□□□□ 0.78
CCDC197-201ENST00000359253 PREX2Q70Z35 1606 aa19.91■□□□□ 0.78
CCDC197-201ENST00000359253 ABCC5O15440 1437 aa19.91■□□□□ 0.78
CCDC197-201ENST00000359253 DENND4BO75064 1496 aaPredicted RBP19.91■□□□□ 0.78
CCDC197-201ENST00000359253 RAPGEF3O95398 923 aa19.9■□□□□ 0.78
CCDC197-201ENST00000359253 NAIPQ13075 1403 aa19.9■□□□□ 0.78
CCDC197-201ENST00000359253 SCAPERQ9BY12 1400 aa19.9■□□□□ 0.78
CCDC197-201ENST00000359253 ARHGAP5Q13017 1502 aa19.9■□□□□ 0.78
CCDC197-201ENST00000359253 PLEKHH2Q8IVE3 1493 aa19.89■□□□□ 0.77
CCDC197-201ENST00000359253 ADGRL1O94910 1474 aa19.88■□□□□ 0.77
CCDC197-201ENST00000359253 ZNF644Q9H582 1327 aaPredicted RBP19.87■□□□□ 0.77
CCDC197-201ENST00000359253 CDC42BPBQ9Y5S2 1711 aa19.87■□□□□ 0.77
CCDC197-201ENST00000359253 GCC2Q8IWJ2 1684 aa19.87■□□□□ 0.77
CCDC197-201ENST00000359253 ARHGEF5Q12774 1597 aa19.87■□□□□ 0.77
CCDC197-201ENST00000359253 SHANK2Q9UPX8 1470 aa19.86■□□□□ 0.77
CCDC197-201ENST00000359253 KIAA1107Q9UPP5 1409 aa19.86■□□□□ 0.77
CCDC197-201ENST00000359253 ZNF777Q9ULD5 760 aaPredicted RBP19.85■□□□□ 0.77
CCDC197-201ENST00000359253 ADGRL2O95490 1459 aa19.85■□□□□ 0.77
CCDC197-201ENST00000359253 MAGI2Q86UL8 1455 aa19.82■□□□□ 0.76
CCDC197-201ENST00000359253 TSPY4P0CV99 314 aa19.82■□□□□ 0.76
CCDC197-201ENST00000359253 TSPY10P0CW01 314 aa19.82■□□□□ 0.76
CCDC197-201ENST00000359253 CROCC2H7BZ55 1655 aa19.81■□□□□ 0.76
CCDC197-201ENST00000359253 AFAP1Q8N556 730 aa19.81■□□□□ 0.76
CCDC197-201ENST00000359253 ANKRD30AQ9BXX3 1397 aa19.81■□□□□ 0.76
CCDC197-201ENST00000359253 ADGBQ8N7X0 1667 aa19.81■□□□□ 0.76
CCDC197-201ENST00000359253 POGZQ7Z3K3 1410 aa19.8■□□□□ 0.76
CCDC197-201ENST00000359253 CHIC2Q9UKJ5 165 aa19.8■□□□□ 0.76
CCDC197-201ENST00000359253 ZNF518AQ6AHZ1 1483 aa19.79■□□□□ 0.76
CCDC197-201ENST00000359253 MBD5Q9P267 1494 aa19.79■□□□□ 0.76
CCDC197-201ENST00000359253 SAMD9LQ8IVG5 1584 aa19.79■□□□□ 0.76
CCDC197-201ENST00000359253 NCOA1Q15788 1441 aa19.79■□□□□ 0.76
CCDC197-201ENST00000359253 HNRNPMP52272 730 aaKnown RBP eCLIP19.79■□□□□ 0.76
CCDC197-201ENST00000359253 RRP7BPQ9NSQ0 103 aa19.78■□□□□ 0.76
CCDC197-201ENST00000359253 CCDC141Q6ZP82 1450 aa19.78■□□□□ 0.76
CCDC197-201ENST00000359253 RICTORQ6R327 1708 aa19.76■□□□□ 0.75
CCDC197-201ENST00000359253 ABCC1P33527 1531 aa19.76■□□□□ 0.75
CCDC197-201ENST00000359253 ZMYM4Q5VZL5 1548 aa19.75■□□□□ 0.75
CCDC197-201ENST00000359253 ARHGEF12Q9NZN5 1544 aa19.75■□□□□ 0.75
CCDC197-201ENST00000359253 C9orf84Q5VXU9 1444 aa19.75■□□□□ 0.75
CCDC197-201ENST00000359253 TRAPPC8Q9Y2L5 1435 aa19.74■□□□□ 0.75
CCDC197-201ENST00000359253 MAST1Q9Y2H9 1570 aa19.74■□□□□ 0.75
CCDC197-201ENST00000359253 MLH3Q9UHC1 1453 aa19.73■□□□□ 0.75
CCDC197-201ENST00000359253 TIMELESSQ9UNS1 1208 aa19.73■□□□□ 0.75
CCDC197-201ENST00000359253 FRMPD1Q5SYB0 1578 aa19.73■□□□□ 0.75
CCDC197-201ENST00000359253 KDM5CP41229 1560 aa19.71■□□□□ 0.75
CCDC197-201ENST00000359253 SPAG9O60271 1321 aaKnown RBP19.71■□□□□ 0.75
CCDC197-201ENST00000359253 MYT1LQ9UL68 1186 aa19.7■□□□□ 0.74
CCDC197-201ENST00000359253 SYCP2Q9BX26 1530 aa19.69■□□□□ 0.74
CCDC197-201ENST00000359253 RTEL1-TNFRSF6BF6WH68 1400 aa19.68■□□□□ 0.74
CCDC197-201ENST00000359253 ATP10AO60312 1499 aa19.67■□□□□ 0.74
CCDC197-201ENST00000359253 ANKRD50Q9ULJ7 1429 aa19.66■□□□□ 0.74
CCDC197-201ENST00000359253 ZFYVE16Q7Z3T8 1539 aa19.66■□□□□ 0.74
CCDC197-201ENST00000359253 TRIM52Q96A61 297 aa19.64■□□□□ 0.73
CCDC197-201ENST00000359253 YEATS2Q9ULM3 1422 aa19.64■□□□□ 0.73
CCDC197-201ENST00000359253 PLXNC1O60486 1568 aa19.63■□□□□ 0.73
CCDC197-201ENST00000359253 KIF15Q9NS87 1388 aa19.62■□□□□ 0.73
CCDC197-201ENST00000359253 HECW2Q9P2P5 1572 aa19.61■□□□□ 0.73
CCDC197-201ENST00000359253 ARHGEF40Q8TER5 1519 aa19.61■□□□□ 0.73
CCDC197-201ENST00000359253 ARID4BQ4LE39 1312 aaPredicted RBP19.6■□□□□ 0.73
CCDC197-201ENST00000359253 MPHOSPH9Q99550 1183 aa19.6■□□□□ 0.73
CCDC197-201ENST00000359253 KDM4FA0A1W2PPD8 638 aa19.58■□□□□ 0.72
CCDC197-201ENST00000359253 DUOX2Q9NRD8 1548 aa19.57■□□□□ 0.72
CCDC197-201ENST00000359253 KIDINS220Q9ULH0 1771 aa19.57■□□□□ 0.72
CCDC197-201ENST00000359253 REREQ9P2R6 1566 aa19.57■□□□□ 0.72
CCDC197-201ENST00000359253 ATP7AQ04656 1500 aa19.56■□□□□ 0.72
CCDC197-201ENST00000359253 KDM5DQ9BY66 1539 aa19.56■□□□□ 0.72
CCDC197-201ENST00000359253 ERBINQ96RT1 1412 aa19.54■□□□□ 0.72
CCDC197-201ENST00000359253 PPP6R1Q9UPN7 881 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms