RNA–Protein interactions for RNA: ENST00000358781.6

FAM3D-201, Transcript of family with sequence similarity 3 member D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3D, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-201ENST00000358781 PREX2Q70Z35 1606 aa27.08■■□□□ 1.93
FAM3D-201ENST00000358781 SCAPERQ9BY12 1400 aa27.06■■□□□ 1.92
FAM3D-201ENST00000358781 CDC42BPAQ5VT25 1732 aa27.06■■□□□ 1.92
FAM3D-201ENST00000358781 EHBP1L1Q8N3D4 1523 aa27.05■■□□□ 1.92
FAM3D-201ENST00000358781 AEBP2Q6ZN18 517 aaPredicted RBP27.04■■□□□ 1.92
FAM3D-201ENST00000358781 KDM4FA0A1W2PPD8 638 aa27.02■■□□□ 1.92
FAM3D-201ENST00000358781 POGZQ7Z3K3 1410 aa27.02■■□□□ 1.92
FAM3D-201ENST00000358781 TIAM1Q13009 1591 aa27.01■■□□□ 1.92
FAM3D-201ENST00000358781 ZMYM4Q5VZL5 1548 aa27.01■■□□□ 1.91
FAM3D-201ENST00000358781 GPATCH8Q9UKJ3 1502 aaKnown RBP26.99■■□□□ 1.91
FAM3D-201ENST00000358781 CCNB3Q8WWL7 1395 aa26.96■■□□□ 1.91
FAM3D-201ENST00000358781 ARHGEF40Q8TER5 1519 aa26.96■■□□□ 1.91
FAM3D-201ENST00000358781 ABCC1P33527 1531 aa26.94■■□□□ 1.9
FAM3D-201ENST00000358781 MAGI2Q86UL8 1455 aa26.94■■□□□ 1.9
FAM3D-201ENST00000358781 MAP3K1Q13233 1512 aa26.94■■□□□ 1.9
FAM3D-201ENST00000358781 ZNF518AQ6AHZ1 1483 aa26.93■■□□□ 1.9
FAM3D-201ENST00000358781 ZFYVE16Q7Z3T8 1539 aa26.92■■□□□ 1.9
FAM3D-201ENST00000358781 SUPT6HQ7KZ85 1726 aaKnown RBP26.91■■□□□ 1.9
FAM3D-201ENST00000358781 ARHGEF12Q9NZN5 1544 aa26.9■■□□□ 1.9
FAM3D-201ENST00000358781 LRRC9Q6ZRR7 1453 aa26.9■■□□□ 1.9
FAM3D-201ENST00000358781 ITSN2Q9NZM3 1697 aa26.9■■□□□ 1.9
FAM3D-201ENST00000358781 CFDP1Q9UEE9 299 aaPredicted RBP26.9■■□□□ 1.9
FAM3D-201ENST00000358781 KDM5CP41229 1560 aa26.89■■□□□ 1.9
FAM3D-201ENST00000358781 SAMD9LQ8IVG5 1584 aa26.89■■□□□ 1.9
FAM3D-201ENST00000358781 YEATS2Q9ULM3 1422 aa26.89■■□□□ 1.89
FAM3D-201ENST00000358781 AFAP1Q8N556 730 aa26.89■■□□□ 1.89
FAM3D-201ENST00000358781 ZNF777Q9ULD5 760 aaPredicted RBP26.89■■□□□ 1.89
FAM3D-201ENST00000358781 NCOA2Q15596 1464 aa26.88■■□□□ 1.89
FAM3D-201ENST00000358781 TRAPPC8Q9Y2L5 1435 aa26.86■■□□□ 1.89
FAM3D-201ENST00000358781 KANK4Q5T7N3 995 aaPredicted RBP26.83■■□□□ 1.89
FAM3D-201ENST00000358781 PLEKHH2Q8IVE3 1493 aa26.83■■□□□ 1.88
FAM3D-201ENST00000358781 SYCP2Q9BX26 1530 aa26.82■■□□□ 1.88
FAM3D-201ENST00000358781 HECW2Q9P2P5 1572 aa26.82■■□□□ 1.88
FAM3D-201ENST00000358781 KIAA1107Q9UPP5 1409 aa26.81■■□□□ 1.88
FAM3D-201ENST00000358781 ARID4BQ4LE39 1312 aaPredicted RBP26.8■■□□□ 1.88
FAM3D-201ENST00000358781 ATP10AO60312 1499 aa26.79■■□□□ 1.88
FAM3D-201ENST00000358781 MLH3Q9UHC1 1453 aa26.79■■□□□ 1.88
FAM3D-201ENST00000358781 APLP2Q06481 763 aa26.79■■□□□ 1.88
FAM3D-201ENST00000358781 HNRNPMP52272 730 aaKnown RBP eCLIP26.78■■□□□ 1.88
FAM3D-201ENST00000358781 BCORL1Q5H9F3 1711 aa26.77■■□□□ 1.88
FAM3D-201ENST00000358781 SIGLEC1Q9BZZ2 1709 aa26.76■■□□□ 1.88
FAM3D-201ENST00000358781 ZNF644Q9H582 1327 aaPredicted RBP26.76■■□□□ 1.87
FAM3D-201ENST00000358781 ADAMTSL3P82987 1691 aa26.76■■□□□ 1.87
FAM3D-201ENST00000358781 MYT1LQ9UL68 1186 aa26.75■■□□□ 1.87
FAM3D-201ENST00000358781 C9orf84Q5VXU9 1444 aa26.75■■□□□ 1.87
FAM3D-201ENST00000358781 DIP2CQ9Y2E4 1556 aa26.73■■□□□ 1.87
FAM3D-201ENST00000358781 KIDINS220Q9ULH0 1771 aa26.72■■□□□ 1.87
FAM3D-201ENST00000358781 ABCA6Q8N139 1617 aa26.72■■□□□ 1.87
FAM3D-201ENST00000358781 SPAG9O60271 1321 aaKnown RBP26.7■■□□□ 1.86
FAM3D-201ENST00000358781 MBD5Q9P267 1494 aa26.69■■□□□ 1.86
FAM3D-201ENST00000358781 CAMSAP2Q08AD1 1489 aa26.68■■□□□ 1.86
FAM3D-201ENST00000358781 REREQ9P2R6 1566 aa26.68■■□□□ 1.86
FAM3D-201ENST00000358781 MADDQ8WXG6 1647 aa26.66■■□□□ 1.86
FAM3D-201ENST00000358781 INO80Q9ULG1 1556 aaPredicted RBP26.65■■□□□ 1.86
FAM3D-201ENST00000358781 MYOM3Q5VTT5 1437 aa26.65■■□□□ 1.86
FAM3D-201ENST00000358781 ATP7AQ04656 1500 aa26.65■■□□□ 1.86
FAM3D-201ENST00000358781 MIA2Q96PC5 1412 aa26.62■■□□□ 1.85
FAM3D-201ENST00000358781 PTPRMP28827 1452 aa26.61■■□□□ 1.85
FAM3D-201ENST00000358781 MLECQ14165 292 aa26.61■■□□□ 1.85
FAM3D-201ENST00000358781 CCDC141Q6ZP82 1450 aa26.6■■□□□ 1.85
FAM3D-201ENST00000358781 AGLP35573 1532 aa26.59■■□□□ 1.85
FAM3D-201ENST00000358781 RIMS1Q86UR5 1692 aaKnown RBP26.58■■□□□ 1.85
FAM3D-201ENST00000358781 ARHGEF5Q12774 1597 aa26.58■■□□□ 1.85
FAM3D-201ENST00000358781 RSPH4AQ5TD94 716 aa26.58■■□□□ 1.85
FAM3D-201ENST00000358781 RTEL1-TNFRSF6BF6WH68 1400 aa26.56■■□□□ 1.84
FAM3D-201ENST00000358781 FER1L4A9Z1Z3 1794 aa26.56■■□□□ 1.84
FAM3D-201ENST00000358781 A2MP01023 1474 aa26.52■■□□□ 1.84
FAM3D-201ENST00000358781 ADGBQ8N7X0 1667 aa26.52■■□□□ 1.84
FAM3D-201ENST00000358781 PLXNC1O60486 1568 aa26.51■■□□□ 1.83
FAM3D-201ENST00000358781 FGD6Q6ZV73 1430 aa26.49■■□□□ 1.83
FAM3D-201ENST00000358781 PTPN23Q9H3S7 1636 aa26.49■■□□□ 1.83
FAM3D-201ENST00000358781 TSPY4P0CV99 314 aa26.47■■□□□ 1.83
FAM3D-201ENST00000358781 TSPY10P0CW01 314 aa26.47■■□□□ 1.83
FAM3D-201ENST00000358781 TCOF1Q13428 1488 aaKnown RBP26.44■■□□□ 1.82
FAM3D-201ENST00000358781 MAST1Q9Y2H9 1570 aa26.44■■□□□ 1.82
FAM3D-201ENST00000358781 DHX29Q7Z478 1369 aaKnown RBP26.42■■□□□ 1.82
FAM3D-201ENST00000358781 PLPPR3Q6T4P5 718 aa26.39■■□□□ 1.81
FAM3D-201ENST00000358781 ABCC5O15440 1437 aa26.37■■□□□ 1.81
FAM3D-201ENST00000358781 CROCC2H7BZ55 1655 aa26.37■■□□□ 1.81
FAM3D-201ENST00000358781 ESF1Q9H501 851 aaKnown RBP26.37■■□□□ 1.81
FAM3D-201ENST00000358781 DNMT1P26358 1616 aaKnown RBP26.36■■□□□ 1.81
FAM3D-201ENST00000358781 CNTLNQ9NXG0 1405 aa26.35■■□□□ 1.81
FAM3D-201ENST00000358781 SHANK2Q9UPX8 1470 aa26.35■■□□□ 1.81
FAM3D-201ENST00000358781 DAPK1P53355 1430 aa26.34■■□□□ 1.81
FAM3D-201ENST00000358781 CEBPAP49715 358 aaPredicted RBP26.33■■□□□ 1.81
FAM3D-201ENST00000358781 GGT6Q6P531 493 aa26.33■■□□□ 1.81
FAM3D-201ENST00000358781 C3P01024 1663 aa26.32■■□□□ 1.8
FAM3D-201ENST00000358781 PPARGC1BQ86YN6 1023 aaKnown RBP26.31■■□□□ 1.8
FAM3D-201ENST00000358781 MROH2AA6NES4 1674 aa26.3■■□□□ 1.8
FAM3D-201ENST00000358781 KIF3BO15066 747 aa26.3■■□□□ 1.8
FAM3D-201ENST00000358781 PPP6R1Q9UPN7 881 aa26.3■■□□□ 1.8
FAM3D-201ENST00000358781 FAM50AQ14320 339 aaKnown RBP26.28■■□□□ 1.8
FAM3D-201ENST00000358781 LMTK3Q96Q04 1460 aa26.28■■□□□ 1.8
FAM3D-201ENST00000358781 CLTCQ00610 1675 aaKnown RBP26.27■■□□□ 1.8
FAM3D-201ENST00000358781 DUOX2Q9NRD8 1548 aa26.25■■□□□ 1.79
FAM3D-201ENST00000358781 SETD1BQ9UPS6 1966 aaKnown RBP26.25■■□□□ 1.79
FAM3D-201ENST00000358781 ZMYM3Q14202 1370 aa26.24■■□□□ 1.79
FAM3D-201ENST00000358781 KIF15Q9NS87 1388 aa26.23■■□□□ 1.79
FAM3D-201ENST00000358781 EIF2AK4Q9P2K8 1649 aaKnown RBP26.23■■□□□ 1.79
FAM3D-201ENST00000358781 PREX1Q8TCU6 1659 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms