RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 ASXL2Q76L83 1435 aa19.58■□□□□ 0.73
NFIX-201ENST00000358552 RSPH4AQ5TD94 716 aa19.58■□□□□ 0.72
NFIX-201ENST00000358552 ROCK1Q13464 1354 aa19.57■□□□□ 0.72
NFIX-201ENST00000358552 DHX57Q6P158 1386 aaKnown RBP19.57■□□□□ 0.72
NFIX-201ENST00000358552 MAPKBP1O60336 1514 aa19.56■□□□□ 0.72
NFIX-201ENST00000358552 KCNH8Q96L42 1107 aa19.54■□□□□ 0.72
NFIX-201ENST00000358552 CDC42BPAQ5VT25 1732 aa19.53■□□□□ 0.72
NFIX-201ENST00000358552 DAPK1P53355 1430 aa19.52■□□□□ 0.71
NFIX-201ENST00000358552 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.52■□□□□ 0.71
NFIX-201ENST00000358552 PTPRKQ15262 1439 aa19.51■□□□□ 0.71
NFIX-201ENST00000358552 DNMT1P26358 1616 aaKnown RBP19.51■□□□□ 0.71
NFIX-201ENST00000358552 CAMSAP2Q08AD1 1489 aa19.5■□□□□ 0.71
NFIX-201ENST00000358552 NAIPQ13075 1403 aa19.5■□□□□ 0.71
NFIX-201ENST00000358552 TTC37Q6PGP7 1564 aa19.49■□□□□ 0.71
NFIX-201ENST00000358552 MYO5CQ9NQX4 1742 aa19.49■□□□□ 0.71
NFIX-201ENST00000358552 ABCC5O15440 1437 aa19.48■□□□□ 0.71
NFIX-201ENST00000358552 ABCA9Q8IUA7 1624 aa19.47■□□□□ 0.71
NFIX-201ENST00000358552 PLEKHH2Q8IVE3 1493 aa19.47■□□□□ 0.71
NFIX-201ENST00000358552 CDC42BPBQ9Y5S2 1711 aa19.47■□□□□ 0.71
NFIX-201ENST00000358552 PREX2Q70Z35 1606 aa19.46■□□□□ 0.71
NFIX-201ENST00000358552 SHANK2Q9UPX8 1470 aa19.44■□□□□ 0.7
NFIX-201ENST00000358552 TSPY4P0CV99 314 aa19.44■□□□□ 0.7
NFIX-201ENST00000358552 TSPY10P0CW01 314 aa19.44■□□□□ 0.7
NFIX-201ENST00000358552 TIMELESSQ9UNS1 1208 aa19.44■□□□□ 0.7
NFIX-201ENST00000358552 ZNF777Q9ULD5 760 aaPredicted RBP19.43■□□□□ 0.7
NFIX-201ENST00000358552 ARAP3Q8WWN8 1544 aa19.43■□□□□ 0.7
NFIX-201ENST00000358552 GCC2Q8IWJ2 1684 aa19.43■□□□□ 0.7
NFIX-201ENST00000358552 ZNF644Q9H582 1327 aaPredicted RBP19.42■□□□□ 0.7
NFIX-201ENST00000358552 KIAA1107Q9UPP5 1409 aa19.42■□□□□ 0.7
NFIX-201ENST00000358552 ANKRD30AQ9BXX3 1397 aa19.42■□□□□ 0.7
NFIX-201ENST00000358552 ADGRL2O95490 1459 aa19.42■□□□□ 0.7
NFIX-201ENST00000358552 ARHGEF5Q12774 1597 aa19.42■□□□□ 0.7
NFIX-201ENST00000358552 PLCH2O75038 1416 aa19.41■□□□□ 0.7
NFIX-201ENST00000358552 EFCAB2Q5VUJ9 269 aa19.4■□□□□ 0.7
NFIX-201ENST00000358552 GLI2P10070 1586 aa19.4■□□□□ 0.7
NFIX-201ENST00000358552 CHIC2Q9UKJ5 165 aa19.39■□□□□ 0.7
NFIX-201ENST00000358552 RRP7BPQ9NSQ0 103 aa19.38■□□□□ 0.69
NFIX-201ENST00000358552 NCOA1Q15788 1441 aa19.38■□□□□ 0.69
NFIX-201ENST00000358552 DIP2BQ9P265 1576 aa19.37■□□□□ 0.69
NFIX-201ENST00000358552 ARHGAP5Q13017 1502 aa19.37■□□□□ 0.69
NFIX-201ENST00000358552 ADGBQ8N7X0 1667 aa19.35■□□□□ 0.69
NFIX-201ENST00000358552 KIF13AQ9H1H9 1805 aa19.35■□□□□ 0.69
NFIX-201ENST00000358552 MAP3K4Q9Y6R4 1608 aa19.35■□□□□ 0.69
NFIX-201ENST00000358552 CCDC141Q6ZP82 1450 aa19.35■□□□□ 0.69
NFIX-201ENST00000358552 MBD5Q9P267 1494 aa19.35■□□□□ 0.69
NFIX-201ENST00000358552 CROCC2H7BZ55 1655 aa19.34■□□□□ 0.69
NFIX-201ENST00000358552 CD109Q6YHK3 1445 aa19.34■□□□□ 0.69
NFIX-201ENST00000358552 SAMD9LQ8IVG5 1584 aa19.33■□□□□ 0.69
NFIX-201ENST00000358552 C9orf84Q5VXU9 1444 aa19.32■□□□□ 0.68
NFIX-201ENST00000358552 FAM69CQ0P6D2 419 aa19.31■□□□□ 0.68
NFIX-201ENST00000358552 FANCAO15360 1455 aa19.3■□□□□ 0.68
NFIX-201ENST00000358552 HNRNPMP52272 730 aaKnown RBP eCLIP19.28■□□□□ 0.682e-6■■■■□ 21.1
NFIX-201ENST00000358552 CFAP74Q9C0B2 1584 aa19.28■□□□□ 0.68
NFIX-201ENST00000358552 MAST1Q9Y2H9 1570 aa19.28■□□□□ 0.68
NFIX-201ENST00000358552 TRIM52Q96A61 297 aa19.28■□□□□ 0.68
NFIX-201ENST00000358552 TSPOAP1O95153 1857 aa19.28■□□□□ 0.68
NFIX-201ENST00000358552 ANKRD50Q9ULJ7 1429 aa19.26■□□□□ 0.67
NFIX-201ENST00000358552 ABCC1P33527 1531 aa19.24■□□□□ 0.67
NFIX-201ENST00000358552 SYCP2Q9BX26 1530 aa19.24■□□□□ 0.67
NFIX-201ENST00000358552 MPHOSPH9Q99550 1183 aa19.23■□□□□ 0.67
NFIX-201ENST00000358552 PPRC1Q5VV67 1664 aaKnown RBP19.23■□□□□ 0.67
NFIX-201ENST00000358552 NEO1Q92859 1461 aa19.22■□□□□ 0.67
NFIX-201ENST00000358552 RTEL1-TNFRSF6BF6WH68 1400 aa19.22■□□□□ 0.67
NFIX-201ENST00000358552 KIF15Q9NS87 1388 aa19.22■□□□□ 0.67
NFIX-201ENST00000358552 ARHGEF12Q9NZN5 1544 aa19.21■□□□□ 0.67
NFIX-201ENST00000358552 ADGRL1O94910 1474 aa19.19■□□□□ 0.66
NFIX-201ENST00000358552 TEX14Q8IWB6 1497 aa19.18■□□□□ 0.66
NFIX-201ENST00000358552 PLXNC1O60486 1568 aa19.18■□□□□ 0.66
NFIX-201ENST00000358552 SLC4A1APQ9BWU0 796 aaKnown RBP19.17■□□□□ 0.66
NFIX-201ENST00000358552 SCAPERQ9BY12 1400 aa19.17■□□□□ 0.66
NFIX-201ENST00000358552 ZNF316A6NFI3 1004 aaPredicted RBP19.15■□□□□ 0.66
NFIX-201ENST00000358552 TRAPPC8Q9Y2L5 1435 aa19.15■□□□□ 0.66
NFIX-201ENST00000358552 DUOX2Q9NRD8 1548 aa19.14■□□□□ 0.66
NFIX-201ENST00000358552 KDM6BO15054 1643 aa19.14■□□□□ 0.66
NFIX-201ENST00000358552 SPAG9O60271 1321 aaKnown RBP19.13■□□□□ 0.65
NFIX-201ENST00000358552 KDM5DQ9BY66 1539 aa19.13■□□□□ 0.65
NFIX-201ENST00000358552 TONSLQ96HA7 1378 aa19.13■□□□□ 0.65
NFIX-201ENST00000358552 ERBINQ96RT1 1412 aa19.13■□□□□ 0.65
NFIX-201ENST00000358552 NEUROD1Q13562 356 aa19.12■□□□□ 0.65
NFIX-201ENST00000358552 SIN3AQ96ST3 1273 aa19.11■□□□□ 0.65
NFIX-201ENST00000358552 TRHP20396 242 aaPredicted RBP19.11■□□□□ 0.65
NFIX-201ENST00000358552 AFAP1Q8N556 730 aa19.11■□□□□ 0.65
NFIX-201ENST00000358552 ZNF518AQ6AHZ1 1483 aa19.1■□□□□ 0.65
NFIX-201ENST00000358552 NUP155O75694 1391 aa19.09■□□□□ 0.65
NFIX-201ENST00000358552 RICTORQ6R327 1708 aa19.09■□□□□ 0.65
NFIX-201ENST00000358552 ANKRD30BQ9BXX2 1392 aa19.09■□□□□ 0.65
NFIX-201ENST00000358552 POGZQ7Z3K3 1410 aa19.09■□□□□ 0.65
NFIX-201ENST00000358552 DENND4BO75064 1496 aaPredicted RBP19.08■□□□□ 0.65
NFIX-201ENST00000358552 PPP1R15AO75807 674 aaPredicted RBP19.08■□□□□ 0.64
NFIX-201ENST00000358552 KDM5CP41229 1560 aa19.08■□□□□ 0.64
NFIX-201ENST00000358552 PZPP20742 1482 aa19.07■□□□□ 0.64
NFIX-201ENST00000358552 INO80Q9ULG1 1556 aaPredicted RBP19.05■□□□□ 0.64
NFIX-201ENST00000358552 ZFYVE16Q7Z3T8 1539 aa19.05■□□□□ 0.64
NFIX-201ENST00000358552 KIDINS220Q9ULH0 1771 aa19.04■□□□□ 0.64
NFIX-201ENST00000358552 ATP7AQ04656 1500 aa19.03■□□□□ 0.64
NFIX-201ENST00000358552 RAPGEF3O95398 923 aa19.03■□□□□ 0.64
NFIX-201ENST00000358552 MLH3Q9UHC1 1453 aa19.02■□□□□ 0.64
NFIX-201ENST00000358552 PKD2Q13563 968 aa19.02■□□□□ 0.63
NFIX-201ENST00000358552 FRMPD1Q5SYB0 1578 aa19.02■□□□□ 0.63
NFIX-201ENST00000358552 HECW2Q9P2P5 1572 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms