RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 G3V3G9 751 aa13.38□□□□□ -0.27
FXR1-202ENST00000357559 DCAF8Q5TAQ9 597 aa13.38□□□□□ -0.27
FXR1-202ENST00000357559 FOXD4L1Q9NU39 408 aa13.38□□□□□ -0.27
FXR1-202ENST00000357559 SRPK2P78362 688 aaKnown RBP13.37□□□□□ -0.27
FXR1-202ENST00000357559 RTF1Q92541 710 aaKnown RBP13.37□□□□□ -0.27
FXR1-202ENST00000357559 TMX4Q9H1E5 349 aaPredicted RBP13.37□□□□□ -0.27
FXR1-202ENST00000357559 GOLGA6L1Q8N7Z2 621 aa13.36□□□□□ -0.27
FXR1-202ENST00000357559 FOXD4L5Q5VV16 416 aaPredicted RBP13.36□□□□□ -0.27
FXR1-202ENST00000357559 FOXD4L4Q8WXT5 416 aaPredicted RBP13.36□□□□□ -0.27
FXR1-202ENST00000357559 PES1O00541 588 aaKnown RBP13.36□□□□□ -0.27
FXR1-202ENST00000357559 CDCA8Q53HL2 280 aa13.36□□□□□ -0.27
FXR1-202ENST00000357559 SLKQ9H2G2 1235 aaPredicted RBP13.35□□□□□ -0.27
FXR1-202ENST00000357559 STK26Q9P289 416 aa13.35□□□□□ -0.27
FXR1-202ENST00000357559 GORABQ5T7V8 394 aa13.34□□□□□ -0.27
FXR1-202ENST00000357559 CSB-PGBD3P0DP91 1061 aa13.33□□□□□ -0.27
FXR1-202ENST00000357559 PPP4R2Q9NY27 417 aa13.32□□□□□ -0.28
FXR1-202ENST00000357559 TRIM6-TRIM34B2RNG4 842 aa13.32□□□□□ -0.28
FXR1-202ENST00000357559 TAF7LQ5H9L4 462 aa13.32□□□□□ -0.28
FXR1-202ENST00000357559 CHMP4BQ9H444 224 aaKnown RBP13.31□□□□□ -0.28
FXR1-202ENST00000357559 CEP89Q96ST8 783 aa13.31□□□□□ -0.28
FXR1-202ENST00000357559 TPM4P67936 248 aa13.3□□□□□ -0.28
FXR1-202ENST00000357559 ITPRIPQ8IWB1 547 aa13.3□□□□□ -0.28
FXR1-202ENST00000357559 TOMM22Q9NS69 142 aa13.29□□□□□ -0.28
FXR1-202ENST00000357559 PLEKHD1A6NEE1 506 aa13.29□□□□□ -0.28
FXR1-202ENST00000357559 RAD21O60216 631 aa13.29□□□□□ -0.28
FXR1-202ENST00000357559 MARCH6O60337 910 aa13.28□□□□□ -0.28
FXR1-202ENST00000357559 ZCCHC6Q5VYS8 1495 aaKnown RBP13.28□□□□□ -0.28
FXR1-202ENST00000357559 CCAR2Q8N163 923 aaKnown RBP13.28□□□□□ -0.28
FXR1-202ENST00000357559 MS4A1P11836 297 aa13.28□□□□□ -0.28
FXR1-202ENST00000357559 CNKSR2Q8WXI2 1034 aa13.27□□□□□ -0.28
FXR1-202ENST00000357559 FOXD4L6Q3SYB3 417 aaPredicted RBP13.27□□□□□ -0.28
FXR1-202ENST00000357559 FOXD4L3Q6VB84 417 aaPredicted RBP13.27□□□□□ -0.28
FXR1-202ENST00000357559 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.27□□□□□ -0.29
FXR1-202ENST00000357559 MFAP1P55081 439 aaKnown RBP13.27□□□□□ -0.29
FXR1-202ENST00000357559 MORC1Q86VD1 984 aa13.27□□□□□ -0.29
FXR1-202ENST00000357559 FRAT2O75474 233 aaPredicted RBP13.26□□□□□ -0.29
FXR1-202ENST00000357559 SIN3AQ96ST3 1273 aa13.25□□□□□ -0.29
FXR1-202ENST00000357559 CFDP1Q9UEE9 299 aaPredicted RBP13.25□□□□□ -0.29
FXR1-202ENST00000357559 GBP4Q96PP9 640 aa13.24□□□□□ -0.29
FXR1-202ENST00000357559 DCAF11Q8TEB1 546 aa13.24□□□□□ -0.29
FXR1-202ENST00000357559 SLC4A10Q6U841 1118 aa13.24□□□□□ -0.29
FXR1-202ENST00000357559 TPD52L1Q16890 204 aaPredicted RBP13.23□□□□□ -0.29
FXR1-202ENST00000357559 BCL11BQ9C0K0 894 aaPredicted RBP13.23□□□□□ -0.29
FXR1-202ENST00000357559 PTMSP20962 102 aa13.21□□□□□ -0.29
FXR1-202ENST00000357559 TPM3P06753 285 aa13.21□□□□□ -0.3
FXR1-202ENST00000357559 SETQ01105 290 aaPredicted RBP13.21□□□□□ -0.3
FXR1-202ENST00000357559 HTATSF1O43719 755 aaKnown RBP13.2□□□□□ -0.3
FXR1-202ENST00000357559 SYAP1Q96A49 352 aaPredicted RBP13.2□□□□□ -0.3
FXR1-202ENST00000357559 GPATCH3Q96I76 525 aa13.2□□□□□ -0.3
FXR1-202ENST00000357559 MSH5O43196 834 aa13.19□□□□□ -0.3
FXR1-202ENST00000357559 TMF1P82094 1093 aa13.19□□□□□ -0.3
FXR1-202ENST00000357559 TCEAL9Q9UHQ7 104 aa13.19□□□□□ -0.3
FXR1-202ENST00000357559 LTV1Q96GA3 475 aaPredicted RBP13.18□□□□□ -0.3
FXR1-202ENST00000357559 SAMD1Q6SPF0 538 aaPredicted RBP13.18□□□□□ -0.3
FXR1-202ENST00000357559 CLIP1P30622 1438 aa13.17□□□□□ -0.3
FXR1-202ENST00000357559 GTF2E1P29083 439 aaPredicted RBP13.17□□□□□ -0.3
FXR1-202ENST00000357559 SF3A1Q15459 793 aaKnown RBP13.17□□□□□ -0.3
FXR1-202ENST00000357559 FBXW7Q969H0 707 aa13.16□□□□□ -0.3
FXR1-202ENST00000357559 ZNF592Q92610 1267 aa13.16□□□□□ -0.3
FXR1-202ENST00000357559 GOLGA6L3A6NEY3 463 aa13.15□□□□□ -0.3
FXR1-202ENST00000357559 NUTM2FA1L443 756 aa13.15□□□□□ -0.3
FXR1-202ENST00000357559 U2AF1L5P0DN76 240 aaPredicted RBP13.15□□□□□ -0.3
FXR1-202ENST00000357559 U2AF1Q01081 240 aaKnown RBP eCLIP13.15□□□□□ -0.3
FXR1-202ENST00000357559 RSF1Q96T23 1441 aaPredicted RBP13.15□□□□□ -0.3
FXR1-202ENST00000357559 PCMTD1Q96MG8 357 aaPredicted RBP13.15□□□□□ -0.3
FXR1-202ENST00000357559 NUTM2DQ5VT03 806 aaPredicted RBP13.15□□□□□ -0.3
FXR1-202ENST00000357559 CALRP27797 417 aaKnown RBP13.14□□□□□ -0.31
FXR1-202ENST00000357559 H3BQV1 296 aa13.14□□□□□ -0.31
FXR1-202ENST00000357559 IFFO2Q5TF58 517 aa13.14□□□□□ -0.31
FXR1-202ENST00000357559 CCDC146Q8IYE0 955 aa13.14□□□□□ -0.31
FXR1-202ENST00000357559 KLHL34Q8N239 644 aa13.14□□□□□ -0.31
FXR1-202ENST00000357559 DCAF1Q9Y4B6 1507 aa13.13□□□□□ -0.31
FXR1-202ENST00000357559 EIF4G1Q04637 1599 aaKnown RBP13.13□□□□□ -0.31
FXR1-202ENST00000357559 CCDC34Q96HJ3 373 aa13.13□□□□□ -0.31
FXR1-202ENST00000357559 CALD1Q05682 793 aaKnown RBP13.13□□□□□ -0.31
FXR1-202ENST00000357559 IPO8O15397 1037 aaKnown RBP13.13□□□□□ -0.31
FXR1-202ENST00000357559 TSR1Q2NL82 804 aaKnown RBP13.13□□□□□ -0.31
FXR1-202ENST00000357559 NGEFQ8N5V2 710 aa13.12□□□□□ -0.31
FXR1-202ENST00000357559 CLUAP1Q96AJ1 413 aa13.12□□□□□ -0.31
FXR1-202ENST00000357559 FOXD1Q16676 465 aa13.12□□□□□ -0.31
FXR1-202ENST00000357559 GGT6Q6P531 493 aa13.12□□□□□ -0.31
FXR1-202ENST00000357559 RBM19Q9Y4C8 960 aaKnown RBP13.12□□□□□ -0.31
FXR1-202ENST00000357559 HDGFL2Q7Z4V5 671 aaPredicted RBP13.12□□□□□ -0.31
FXR1-202ENST00000357559 KIF16BQ96L93 1317 aa13.11□□□□□ -0.31
FXR1-202ENST00000357559 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.11□□□□□ -0.313e-6■■■■■ 37.6
FXR1-202ENST00000357559 MCTP1Q6DN14 999 aa13.11□□□□□ -0.31
FXR1-202ENST00000357559 RILPL2Q969X0 211 aa13.11□□□□□ -0.31
FXR1-202ENST00000357559 SMC4Q9NTJ3 1288 aa13.11□□□□□ -0.31
FXR1-202ENST00000357559 CTDP1Q9Y5B0 961 aaPredicted RBP13.1□□□□□ -0.31
FXR1-202ENST00000357559 KANK1Q14678 1352 aa13.1□□□□□ -0.31
FXR1-202ENST00000357559 SPAG9O60271 1321 aaKnown RBP13.1□□□□□ -0.31
FXR1-202ENST00000357559 STK31Q9BXU1 1019 aa13.1□□□□□ -0.31
FXR1-202ENST00000357559 TRIM34Q9BYJ4 488 aa13.1□□□□□ -0.31
FXR1-202ENST00000357559 FOSBP53539 338 aa13.1□□□□□ -0.31
FXR1-202ENST00000357559 CFAP44Q96MT7 982 aa13.09□□□□□ -0.31
FXR1-202ENST00000357559 ZNF771Q7L3S4 317 aaPredicted RBP13.09□□□□□ -0.31
FXR1-202ENST00000357559 CSPP1Q1MSJ5 1256 aa13.09□□□□□ -0.31
FXR1-202ENST00000357559 CWC22Q9HCG8 908 aaKnown RBP13.08□□□□□ -0.32
FXR1-202ENST00000357559 RWDD1Q9H446 243 aaPredicted RBP13.08□□□□□ -0.32
FXR1-202ENST00000357559 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms