RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 AKNAQ7Z591 1439 aa16.61■□□□□ 0.25
SMARCAL1-201ENST00000357276 P3H3Q8IVL6 736 aa16.61■□□□□ 0.25
SMARCAL1-201ENST00000357276 GRIN2AQ12879 1464 aa16.61■□□□□ 0.25
SMARCAL1-201ENST00000357276 B4GALNT3Q6L9W6 998 aa16.61■□□□□ 0.25
SMARCAL1-201ENST00000357276 UGGT2Q9NYU1 1516 aa16.6■□□□□ 0.25
SMARCAL1-201ENST00000357276 CCDC7Q96M83 1385 aa16.6■□□□□ 0.25
SMARCAL1-201ENST00000357276 TCOF1Q13428 1488 aaKnown RBP16.59■□□□□ 0.25
SMARCAL1-201ENST00000357276 EHBP1L1Q8N3D4 1523 aa16.59■□□□□ 0.25
SMARCAL1-201ENST00000357276 RNF123Q5XPI4 1314 aa16.59■□□□□ 0.25
SMARCAL1-201ENST00000357276 EIF4G2P78344 907 aaKnown RBP eCLIP16.58■□□□□ 0.24
SMARCAL1-201ENST00000357276 SMG6Q86US8 1419 aaKnown RBP16.57■□□□□ 0.24
SMARCAL1-201ENST00000357276 KIAA0586Q9BVV6 1533 aa16.57■□□□□ 0.24
SMARCAL1-201ENST00000357276 MTUS2Q5JR59 1369 aa16.57■□□□□ 0.24
SMARCAL1-201ENST00000357276 PAK3O75914 559 aaPredicted RBP16.57■□□□□ 0.24
SMARCAL1-201ENST00000357276 C11orf95C9JLR9 678 aaPredicted RBP16.56■□□□□ 0.24
SMARCAL1-201ENST00000357276 KDM6BO15054 1643 aa16.56■□□□□ 0.24
SMARCAL1-201ENST00000357276 SPATA31E1Q6ZUB1 1445 aa16.55■□□□□ 0.24
SMARCAL1-201ENST00000357276 ATP1B4Q9UN42 357 aaPredicted RBP16.54■□□□□ 0.24
SMARCAL1-201ENST00000357276 NUP160Q12769 1436 aa16.53■□□□□ 0.24
SMARCAL1-201ENST00000357276 CEP170Q5SW79 1584 aa16.52■□□□□ 0.23
SMARCAL1-201ENST00000357276 MRS2Q9HD23 443 aa16.51■□□□□ 0.23
SMARCAL1-201ENST00000357276 MAGI3Q5TCQ9 1506 aa16.51■□□□□ 0.23
SMARCAL1-201ENST00000357276 TEX14Q8IWB6 1497 aa16.51■□□□□ 0.23
SMARCAL1-201ENST00000357276 PRKCSHP14314 528 aaPredicted RBP16.5■□□□□ 0.23
SMARCAL1-201ENST00000357276 FAM9BQ8IZU0 186 aa16.5■□□□□ 0.23
SMARCAL1-201ENST00000357276 IPO9Q96P70 1041 aaKnown RBP16.49■□□□□ 0.23
SMARCAL1-201ENST00000357276 RPRD2Q5VT52 1461 aaKnown RBP16.48■□□□□ 0.23
SMARCAL1-201ENST00000357276 L3MBTL2Q969R5 705 aa16.47■□□□□ 0.23
SMARCAL1-201ENST00000357276 KIAA0556O60303 1618 aa16.47■□□□□ 0.23
SMARCAL1-201ENST00000357276 CHD1O14646 1710 aa16.46■□□□□ 0.22
SMARCAL1-201ENST00000357276 KIF7Q2M1P5 1343 aa16.45■□□□□ 0.22
SMARCAL1-201ENST00000357276 DHX29Q7Z478 1369 aaKnown RBP16.45■□□□□ 0.22
SMARCAL1-201ENST00000357276 NBR1Q14596 966 aa16.44■□□□□ 0.22
SMARCAL1-201ENST00000357276 NUDCQ9Y266 331 aa16.44■□□□□ 0.22
SMARCAL1-201ENST00000357276 ANKRD30BQ9BXX2 1392 aa16.44■□□□□ 0.22
SMARCAL1-201ENST00000357276 MPHOSPH9Q99550 1183 aa16.43■□□□□ 0.22
SMARCAL1-201ENST00000357276 DISP1Q96F81 1524 aa16.42■□□□□ 0.22
SMARCAL1-201ENST00000357276 NBPF8Q3BBV2 869 aa16.42■□□□□ 0.22
SMARCAL1-201ENST00000357276 MIA2Q96PC5 1412 aa16.42■□□□□ 0.22
SMARCAL1-201ENST00000357276 ANP32AP39687 249 aaKnown RBP16.41■□□□□ 0.22
SMARCAL1-201ENST00000357276 CHMP7Q8WUX9 453 aaPredicted RBP16.41■□□□□ 0.22
SMARCAL1-201ENST00000357276 RRP7BPQ9NSQ0 103 aa16.4■□□□□ 0.22
SMARCAL1-201ENST00000357276 BCORL1Q5H9F3 1711 aa16.39■□□□□ 0.21
SMARCAL1-201ENST00000357276 SHROOM2Q13796 1616 aa16.39■□□□□ 0.21
SMARCAL1-201ENST00000357276 MBD5Q9P267 1494 aa16.38■□□□□ 0.21
SMARCAL1-201ENST00000357276 CCDC136Q96JN2 1154 aa16.37■□□□□ 0.21
SMARCAL1-201ENST00000357276 ZBTB47Q9UFB7 747 aaPredicted RBP16.37■□□□□ 0.21
SMARCAL1-201ENST00000357276 ROCK1Q13464 1354 aa16.36■□□□□ 0.21
SMARCAL1-201ENST00000357276 DNMT1P26358 1616 aaKnown RBP16.33■□□□□ 0.2
SMARCAL1-201ENST00000357276 KDM5CP41229 1560 aa16.33■□□□□ 0.2
SMARCAL1-201ENST00000357276 RTL5Q5HYW3 569 aaPredicted RBP16.32■□□□□ 0.2
SMARCAL1-201ENST00000357276 CHIC2Q9UKJ5 165 aa16.32■□□□□ 0.2
SMARCAL1-201ENST00000357276 CARMIL2Q6F5E8 1435 aa16.32■□□□□ 0.2
SMARCAL1-201ENST00000357276 ARID4BQ4LE39 1312 aaPredicted RBP16.31■□□□□ 0.2
SMARCAL1-201ENST00000357276 RAPGEF6Q8TEU7 1601 aa16.31■□□□□ 0.2
SMARCAL1-201ENST00000357276 ANO8Q9HCE9 1232 aaPredicted RBP16.31■□□□□ 0.2
SMARCAL1-201ENST00000357276 KIF14Q15058 1648 aa16.31■□□□□ 0.2
SMARCAL1-201ENST00000357276 EPRSP07814 1512 aaKnown RBP16.31■□□□□ 0.2
SMARCAL1-201ENST00000357276 LRPPRCP42704 1394 aaKnown RBP16.31■□□□□ 0.2
SMARCAL1-201ENST00000357276 CLASP1Q7Z460 1538 aa16.3■□□□□ 0.2
SMARCAL1-201ENST00000357276 PNISRQ8TF01 805 aaKnown RBP16.3■□□□□ 0.2
SMARCAL1-201ENST00000357276 FOXD1Q16676 465 aa16.3■□□□□ 0.2
SMARCAL1-201ENST00000357276 USP35Q9P2H5 1018 aa16.3■□□□□ 0.2
SMARCAL1-201ENST00000357276 DAPK1P53355 1430 aa16.29■□□□□ 0.2
SMARCAL1-201ENST00000357276 WASHC2CQ9Y4E1 1318 aa16.27■□□□□ 0.2
SMARCAL1-201ENST00000357276 PZPP20742 1482 aa16.26■□□□□ 0.19
SMARCAL1-201ENST00000357276 E9PCH4 1651 aa16.26■□□□□ 0.19
SMARCAL1-201ENST00000357276 TCERG1O14776 1098 aaKnown RBP16.26■□□□□ 0.19
SMARCAL1-201ENST00000357276 JPH4Q96JJ6 628 aa16.25■□□□□ 0.19
SMARCAL1-201ENST00000357276 ABCC5O15440 1437 aa16.25■□□□□ 0.19
SMARCAL1-201ENST00000357276 IL27Q8NEV9 243 aa16.25■□□□□ 0.19
SMARCAL1-201ENST00000357276 ABCA8O94911 1581 aa16.24■□□□□ 0.19
SMARCAL1-201ENST00000357276 SALL2Q9Y467 1007 aaPredicted RBP16.24■□□□□ 0.19
SMARCAL1-201ENST00000357276 USP47Q96K76 1375 aa16.23■□□□□ 0.19
SMARCAL1-201ENST00000357276 ROCK2O75116 1388 aaKnown RBP16.23■□□□□ 0.19
SMARCAL1-201ENST00000357276 CDK13Q14004 1512 aaKnown RBP16.23■□□□□ 0.19
SMARCAL1-201ENST00000357276 MS4A1P11836 297 aa16.22■□□□□ 0.19
SMARCAL1-201ENST00000357276 FBLN2P98095 1184 aa16.22■□□□□ 0.19
SMARCAL1-201ENST00000357276 RRP1P56182 461 aaKnown RBP16.21■□□□□ 0.19
SMARCAL1-201ENST00000357276 UHRF1BP1Q6BDS2 1440 aa16.21■□□□□ 0.19
SMARCAL1-201ENST00000357276 BACH2Q9BYV9 841 aa16.21■□□□□ 0.19
SMARCAL1-201ENST00000357276 KTN1Q86UP2 1357 aaKnown RBP16.21■□□□□ 0.19
SMARCAL1-201ENST00000357276 NUP153P49790 1475 aaKnown RBP16.21■□□□□ 0.19
SMARCAL1-201ENST00000357276 BRD4O60885 1362 aaPredicted RBP16.2■□□□□ 0.18
SMARCAL1-201ENST00000357276 PDE4AP27815 886 aa16.2■□□□□ 0.18
SMARCAL1-201ENST00000357276 ADGBQ8N7X0 1667 aa16.2■□□□□ 0.18
SMARCAL1-201ENST00000357276 RALGAPBQ86X10 1494 aa16.19■□□□□ 0.18
SMARCAL1-201ENST00000357276 ADCY10Q96PN6 1610 aa16.18■□□□□ 0.18
SMARCAL1-201ENST00000357276 PRG4Q92954 1404 aaPredicted RBP16.18■□□□□ 0.18
SMARCAL1-201ENST00000357276 KIF15Q9NS87 1388 aa16.17■□□□□ 0.18
SMARCAL1-201ENST00000357276 EXOC6Q8TAG9 804 aa16.16■□□□□ 0.18
SMARCAL1-201ENST00000357276 SLC4A1APQ9BWU0 796 aaKnown RBP16.16■□□□□ 0.18
SMARCAL1-201ENST00000357276 KIAA1107Q9UPP5 1409 aa16.16■□□□□ 0.18
SMARCAL1-201ENST00000357276 PPM1GO15355 546 aaPredicted RBP16.15■□□□□ 0.18
SMARCAL1-201ENST00000357276 NEFMP07197 916 aa16.15■□□□□ 0.18
SMARCAL1-201ENST00000357276 CROCC2H7BZ55 1655 aa16.15■□□□□ 0.18
SMARCAL1-201ENST00000357276 ARHGEF12Q9NZN5 1544 aa16.14■□□□□ 0.17
SMARCAL1-201ENST00000357276 TMC1Q8TDI8 760 aa16.14■□□□□ 0.17
SMARCAL1-201ENST00000357276 ADGRL2O95490 1459 aa16.13■□□□□ 0.17
SMARCAL1-201ENST00000357276 MYBBP1AQ9BQG0 1328 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms