RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 PLB1Q6P1J6 1458 aa6.47□□□□□ -1.37
CNOT4-202ENST00000356162 CHADLQ6NUI6 762 aa6.46□□□□□ -1.38
CNOT4-202ENST00000356162 HECW1Q76N89 1606 aa6.46□□□□□ -1.38
CNOT4-202ENST00000356162 KIF13AQ9H1H9 1805 aa6.46□□□□□ -1.38
CNOT4-202ENST00000356162 DIP2BQ9P265 1576 aa6.46□□□□□ -1.38
CNOT4-202ENST00000356162 FMN1Q68DA7 1419 aa6.45□□□□□ -1.38
CNOT4-202ENST00000356162 CLIP1P30622 1438 aa6.45□□□□□ -1.38
CNOT4-202ENST00000356162 NPM1P06748 294 aaKnown RBP eCLIP6.44□□□□□ -1.38
CNOT4-202ENST00000356162 GLI2P10070 1586 aa6.44□□□□□ -1.38
CNOT4-202ENST00000356162 NUP153P49790 1475 aaKnown RBP6.44□□□□□ -1.38
CNOT4-202ENST00000356162 ABCC10Q5T3U5 1492 aa6.44□□□□□ -1.38
CNOT4-202ENST00000356162 PCF11O94913 1555 aaKnown RBP6.43□□□□□ -1.38
CNOT4-202ENST00000356162 CEP162Q5TB80 1403 aa6.43□□□□□ -1.38
CNOT4-202ENST00000356162 TTBK1Q5TCY1 1321 aaPredicted RBP6.43□□□□□ -1.38
CNOT4-202ENST00000356162 HAX1O00165 279 aa6.43□□□□□ -1.38
CNOT4-202ENST00000356162 WDR7Q9Y4E6 1490 aa6.43□□□□□ -1.38
CNOT4-202ENST00000356162 ASXL2Q76L83 1435 aa6.43□□□□□ -1.38
CNOT4-202ENST00000356162 P3H3Q8IVL6 736 aa6.43□□□□□ -1.38
CNOT4-202ENST00000356162 FYCO1Q9BQS8 1478 aa6.42□□□□□ -1.38
CNOT4-202ENST00000356162 ATP10BO94823 1461 aa6.42□□□□□ -1.38
CNOT4-202ENST00000356162 RANGAP1P46060 587 aaPredicted RBP6.41□□□□□ -1.38
CNOT4-202ENST00000356162 CASKIN1Q8WXD9 1431 aa6.41□□□□□ -1.38
CNOT4-202ENST00000356162 EPRSP07814 1512 aaKnown RBP6.41□□□□□ -1.38
CNOT4-202ENST00000356162 LRRIQ1Q96JM4 1722 aa6.41□□□□□ -1.38
CNOT4-202ENST00000356162 CFAP43Q8NDM7 1665 aa6.41□□□□□ -1.38
CNOT4-202ENST00000356162 CCDC18Q5T9S5 1454 aa6.41□□□□□ -1.38
CNOT4-202ENST00000356162 FKBP8Q14318 412 aa6.41□□□□□ -1.38
CNOT4-202ENST00000356162 MAP3K4Q9Y6R4 1608 aa6.41□□□□□ -1.38
CNOT4-202ENST00000356162 CREBZFQ9NS37 354 aa6.4□□□□□ -1.38
CNOT4-202ENST00000356162 SP7Q8TDD2 431 aaPredicted RBP6.4□□□□□ -1.39
CNOT4-202ENST00000356162 CDK13Q14004 1512 aaKnown RBP6.39□□□□□ -1.39
CNOT4-202ENST00000356162 PPRC1Q5VV67 1664 aaKnown RBP6.39□□□□□ -1.39
CNOT4-202ENST00000356162 C19orf67A6NJJ6 358 aa6.39□□□□□ -1.39
CNOT4-202ENST00000356162 EVX2Q03828 476 aa6.39□□□□□ -1.39
CNOT4-202ENST00000356162 FARP1Q9Y4F1 1045 aaPredicted RBP6.39□□□□□ -1.39
CNOT4-202ENST00000356162 ABCA9Q8IUA7 1624 aa6.39□□□□□ -1.39
CNOT4-202ENST00000356162 KIF14Q15058 1648 aa6.37□□□□□ -1.39
CNOT4-202ENST00000356162 TSPOAP1O95153 1857 aa6.37□□□□□ -1.39
CNOT4-202ENST00000356162 VPS8Q8N3P4 1428 aa6.36□□□□□ -1.39
CNOT4-202ENST00000356162 TEX14Q8IWB6 1497 aa6.36□□□□□ -1.39
CNOT4-202ENST00000356162 MAGI3Q5TCQ9 1506 aa6.36□□□□□ -1.39
CNOT4-202ENST00000356162 LOC105371045A0A1W2PR82 267 aa6.36□□□□□ -1.39
CNOT4-202ENST00000356162 FAM69CQ0P6D2 419 aa6.36□□□□□ -1.39
CNOT4-202ENST00000356162 CFAP74Q9C0B2 1584 aa6.35□□□□□ -1.39
CNOT4-202ENST00000356162 TROQ12816 1431 aaPredicted RBP6.35□□□□□ -1.39
CNOT4-202ENST00000356162 TTC37Q6PGP7 1564 aa6.35□□□□□ -1.39
CNOT4-202ENST00000356162 EHBP1L1Q8N3D4 1523 aa6.35□□□□□ -1.39
CNOT4-202ENST00000356162 ARID3CA6NKF2 412 aa6.34□□□□□ -1.39
CNOT4-202ENST00000356162 MYO5CQ9NQX4 1742 aa6.34□□□□□ -1.39
CNOT4-202ENST00000356162 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.34□□□□□ -1.39
CNOT4-202ENST00000356162 ARAP3Q8WWN8 1544 aa6.34□□□□□ -1.39
CNOT4-202ENST00000356162 TIAM1Q13009 1591 aa6.33□□□□□ -1.4
CNOT4-202ENST00000356162 KDM6BO15054 1643 aa6.33□□□□□ -1.4
CNOT4-202ENST00000356162 CD109Q6YHK3 1445 aa6.33□□□□□ -1.4
CNOT4-202ENST00000356162 MAP3K1Q13233 1512 aa6.33□□□□□ -1.4
CNOT4-202ENST00000356162 PLEKHD1A6NEE1 506 aa6.33□□□□□ -1.4
CNOT4-202ENST00000356162 CDK11AQ9UQ88 783 aaPredicted RBP6.33□□□□□ -1.4
CNOT4-202ENST00000356162 MNX1P50219 401 aaPredicted RBP6.32□□□□□ -1.4
CNOT4-202ENST00000356162 PREX2Q70Z35 1606 aa6.32□□□□□ -1.4
CNOT4-202ENST00000356162 NEO1Q92859 1461 aa6.32□□□□□ -1.4
CNOT4-202ENST00000356162 ATP1B4Q9UN42 357 aaPredicted RBP6.31□□□□□ -1.4
CNOT4-202ENST00000356162 CD44P16070 742 aaKnown RBP6.31□□□□□ -1.4
CNOT4-202ENST00000356162 SUPT6HQ7KZ85 1726 aaKnown RBP6.31□□□□□ -1.4
CNOT4-202ENST00000356162 ITSN2Q9NZM3 1697 aa6.31□□□□□ -1.4
CNOT4-202ENST00000356162 PHLDB1Q86UU1 1377 aa6.3□□□□□ -1.4
CNOT4-202ENST00000356162 CDC42BPAQ5VT25 1732 aa6.3□□□□□ -1.4
CNOT4-202ENST00000356162 KCNH8Q96L42 1107 aa6.3□□□□□ -1.4
CNOT4-202ENST00000356162 CDC42BPBQ9Y5S2 1711 aa6.29□□□□□ -1.4
CNOT4-202ENST00000356162 MTUS2Q5JR59 1369 aa6.29□□□□□ -1.4
CNOT4-202ENST00000356162 PLCH2O75038 1416 aa6.29□□□□□ -1.4
CNOT4-202ENST00000356162 FANCAO15360 1455 aa6.28□□□□□ -1.4
CNOT4-202ENST00000356162 FRMPD1Q5SYB0 1578 aa6.28□□□□□ -1.4
CNOT4-202ENST00000356162 ARHGAP5Q13017 1502 aa6.28□□□□□ -1.4
CNOT4-202ENST00000356162 LRRC9Q6ZRR7 1453 aa6.28□□□□□ -1.4
CNOT4-202ENST00000356162 RICTORQ6R327 1708 aa6.28□□□□□ -1.4
CNOT4-202ENST00000356162 ABCC1P33527 1531 aa6.27□□□□□ -1.41
CNOT4-202ENST00000356162 ZMYM4Q5VZL5 1548 aa6.27□□□□□ -1.41
CNOT4-202ENST00000356162 AKNAQ7Z591 1439 aa6.26□□□□□ -1.41
CNOT4-202ENST00000356162 NCOA2Q15596 1464 aa6.26□□□□□ -1.41
CNOT4-202ENST00000356162 MIER1Q8N108 512 aa6.26□□□□□ -1.41
CNOT4-202ENST00000356162 ADGRL1O94910 1474 aa6.26□□□□□ -1.41
CNOT4-202ENST00000356162 COL17A1Q9UMD9 1497 aaPredicted RBP6.26□□□□□ -1.41
CNOT4-202ENST00000356162 ARHGEF40Q8TER5 1519 aa6.26□□□□□ -1.41
CNOT4-202ENST00000356162 GPATCH8Q9UKJ3 1502 aaKnown RBP6.26□□□□□ -1.41
CNOT4-202ENST00000356162 DENND4BO75064 1496 aaPredicted RBP6.25□□□□□ -1.41
CNOT4-202ENST00000356162 SAMD9LQ8IVG5 1584 aa6.25□□□□□ -1.41
CNOT4-202ENST00000356162 POGZQ7Z3K3 1410 aa6.25□□□□□ -1.41
CNOT4-202ENST00000356162 PLEKHH2Q8IVE3 1493 aa6.25□□□□□ -1.41
CNOT4-202ENST00000356162 CCNB3Q8WWL7 1395 aa6.25□□□□□ -1.41
CNOT4-202ENST00000356162 KDM5CP41229 1560 aa6.24□□□□□ -1.41
CNOT4-202ENST00000356162 GABBR2O75899 941 aa6.24□□□□□ -1.41
CNOT4-202ENST00000356162 PLEKHG5O94827 1062 aa6.24□□□□□ -1.41
CNOT4-202ENST00000356162 ZRANB1Q9UGI0 708 aa6.24□□□□□ -1.41
CNOT4-202ENST00000356162 FBXO3Q9UK99 471 aa6.24□□□□□ -1.41
CNOT4-202ENST00000356162 EFCAB2Q5VUJ9 269 aa6.23□□□□□ -1.41
CNOT4-202ENST00000356162 ZNF579Q8NAF0 562 aaKnown RBP6.23□□□□□ -1.41
CNOT4-202ENST00000356162 HECW2Q9P2P5 1572 aa6.23□□□□□ -1.41
CNOT4-202ENST00000356162 ZNF518AQ6AHZ1 1483 aa6.23□□□□□ -1.41
CNOT4-202ENST00000356162 SYCP2Q9BX26 1530 aa6.23□□□□□ -1.41
CNOT4-202ENST00000356162 PLCD3Q8N3E9 789 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms