RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 ABCC5O15440 1437 aa25.44■■□□□ 1.66
NPAS3-202ENST00000356141 DAPK1P53355 1430 aa25.44■■□□□ 1.66
NPAS3-202ENST00000356141 GPATCH8Q9UKJ3 1502 aaKnown RBP25.44■■□□□ 1.66
NPAS3-202ENST00000356141 ABCA8O94911 1581 aa25.44■■□□□ 1.66
NPAS3-202ENST00000356141 MIA2Q96PC5 1412 aa25.43■■□□□ 1.66
NPAS3-202ENST00000356141 TCOF1Q13428 1488 aaKnown RBP25.42■■□□□ 1.66
NPAS3-202ENST00000356141 CAMSAP2Q08AD1 1489 aa25.41■■□□□ 1.66
NPAS3-202ENST00000356141 UACAQ9BZF9 1416 aa25.38■■□□□ 1.65
NPAS3-202ENST00000356141 MPHOSPH9Q99550 1183 aa25.38■■□□□ 1.65
NPAS3-202ENST00000356141 TONSLQ96HA7 1378 aa25.37■■□□□ 1.65
NPAS3-202ENST00000356141 SLC4A1APQ9BWU0 796 aaKnown RBP25.35■■□□□ 1.65
NPAS3-202ENST00000356141 PPP1R15AO75807 674 aaPredicted RBP25.28■■□□□ 1.64
NPAS3-202ENST00000356141 TSPY4P0CV99 314 aa25.27■■□□□ 1.64
NPAS3-202ENST00000356141 TSPY10P0CW01 314 aa25.27■■□□□ 1.64
NPAS3-202ENST00000356141 DENND4BO75064 1496 aaPredicted RBP25.25■■□□□ 1.63
NPAS3-202ENST00000356141 DNMT1P26358 1616 aaKnown RBP25.25■■□□□ 1.63
NPAS3-202ENST00000356141 DDX10Q13206 875 aaKnown RBP25.24■■□□□ 1.63
NPAS3-202ENST00000356141 ABCC10Q5T3U5 1492 aa25.24■■□□□ 1.63
NPAS3-202ENST00000356141 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.23■■□□□ 1.63
NPAS3-202ENST00000356141 SCAF1Q9H7N4 1312 aaKnown RBP25.23■■□□□ 1.63
NPAS3-202ENST00000356141 CDC42BPAQ5VT25 1732 aa25.23■■□□□ 1.63
NPAS3-202ENST00000356141 SHROOM2Q13796 1616 aa25.22■■□□□ 1.63
NPAS3-202ENST00000356141 ZNF326Q5BKZ1 582 aaKnown RBP25.22■■□□□ 1.63
NPAS3-202ENST00000356141 AKNAQ7Z591 1439 aa25.21■■□□□ 1.63
NPAS3-202ENST00000356141 NCOA1Q15788 1441 aa25.2■■□□□ 1.62
NPAS3-202ENST00000356141 CLASP1Q7Z460 1538 aa25.19■■□□□ 1.62
NPAS3-202ENST00000356141 OSCARQ8IYS5 282 aa25.18■■□□□ 1.62
NPAS3-202ENST00000356141 GCC2Q8IWJ2 1684 aa25.18■■□□□ 1.62
NPAS3-202ENST00000356141 ITSN2Q9NZM3 1697 aa25.18■■□□□ 1.62
NPAS3-202ENST00000356141 TTC37Q6PGP7 1564 aa25.16■■□□□ 1.62
NPAS3-202ENST00000356141 PKD2Q13563 968 aa25.16■■□□□ 1.62
NPAS3-202ENST00000356141 L3MBTL2Q969R5 705 aa25.16■■□□□ 1.62
NPAS3-202ENST00000356141 ARHGAP5Q13017 1502 aa25.16■■□□□ 1.62
NPAS3-202ENST00000356141 ABCC2Q92887 1545 aa25.16■■□□□ 1.62
NPAS3-202ENST00000356141 MYT1LQ9UL68 1186 aa25.16■■□□□ 1.62
NPAS3-202ENST00000356141 ADCY10Q96PN6 1610 aa25.15■■□□□ 1.62
NPAS3-202ENST00000356141 C9orf84Q5VXU9 1444 aa25.15■■□□□ 1.62
NPAS3-202ENST00000356141 ANKRD30AQ9BXX3 1397 aa25.15■■□□□ 1.62
NPAS3-202ENST00000356141 ROCK1Q13464 1354 aa25.13■■□□□ 1.61
NPAS3-202ENST00000356141 NUP155O75694 1391 aa25.11■■□□□ 1.61
NPAS3-202ENST00000356141 ANKRD50Q9ULJ7 1429 aa25.11■■□□□ 1.61
NPAS3-202ENST00000356141 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.1■■□□□ 1.61
NPAS3-202ENST00000356141 KIF15Q9NS87 1388 aa25.09■■□□□ 1.61
NPAS3-202ENST00000356141 SYCP2Q9BX26 1530 aa25.08■■□□□ 1.61
NPAS3-202ENST00000356141 AFAP1Q8N556 730 aa25.07■■□□□ 1.6
NPAS3-202ENST00000356141 SAMD9LQ8IVG5 1584 aa25.07■■□□□ 1.6
NPAS3-202ENST00000356141 CDC42BPBQ9Y5S2 1711 aa25.07■■□□□ 1.6
NPAS3-202ENST00000356141 ZCCHC11Q5TAX3 1644 aaKnown RBP25.06■■□□□ 1.6
NPAS3-202ENST00000356141 CNGB1Q14028 1251 aaPredicted RBP25.04■■□□□ 1.6
NPAS3-202ENST00000356141 KDM2AQ9Y2K7 1162 aa25.03■■□□□ 1.6
NPAS3-202ENST00000356141 MBD5Q9P267 1494 aa25.02■■□□□ 1.6
NPAS3-202ENST00000356141 NBPF8Q3BBV2 869 aa25.01■■□□□ 1.59
NPAS3-202ENST00000356141 PZPP20742 1482 aa25.01■■□□□ 1.59
NPAS3-202ENST00000356141 ANKRD30BQ9BXX2 1392 aa25.01■■□□□ 1.59
NPAS3-202ENST00000356141 TIMELESSQ9UNS1 1208 aa24.99■■□□□ 1.59
NPAS3-202ENST00000356141 EFCAB2Q5VUJ9 269 aa24.99■■□□□ 1.59
NPAS3-202ENST00000356141 ARHGEF12Q9NZN5 1544 aa24.96■■□□□ 1.59
NPAS3-202ENST00000356141 ACIN1Q9UKV3 1341 aaKnown RBP24.96■■□□□ 1.59
NPAS3-202ENST00000356141 HSPA5P11021 654 aaKnown RBP24.96■■□□□ 1.59
NPAS3-202ENST00000356141 POLR3GLQ9BT43 218 aa24.96■■□□□ 1.59
NPAS3-202ENST00000356141 CROCC2H7BZ55 1655 aa24.96■■□□□ 1.59
NPAS3-202ENST00000356141 PREX2Q70Z35 1606 aa24.96■■□□□ 1.59
NPAS3-202ENST00000356141 CCDC141Q6ZP82 1450 aa24.96■■□□□ 1.59
NPAS3-202ENST00000356141 NPM1P06748 294 aaKnown RBP eCLIP24.95■■□□□ 1.59
NPAS3-202ENST00000356141 RGL3Q3MIN7 710 aa24.95■■□□□ 1.59
NPAS3-202ENST00000356141 CYB5RLQ6IPT4 315 aa24.95■■□□□ 1.59
NPAS3-202ENST00000356141 ADGBQ8N7X0 1667 aa24.95■■□□□ 1.58
NPAS3-202ENST00000356141 KDM5BQ9UGL1 1544 aa24.93■■□□□ 1.58
NPAS3-202ENST00000356141 TRAPPC8Q9Y2L5 1435 aa24.92■■□□□ 1.58
NPAS3-202ENST00000356141 CENPBP07199 599 aaPredicted RBP24.92■■□□□ 1.58
NPAS3-202ENST00000356141 ADGRL2O95490 1459 aa24.92■■□□□ 1.58
NPAS3-202ENST00000356141 MYO5CQ9NQX4 1742 aa24.88■■□□□ 1.57
NPAS3-202ENST00000356141 PLCH2O75038 1416 aa24.88■■□□□ 1.57
NPAS3-202ENST00000356141 PLEKHH2Q8IVE3 1493 aa24.87■■□□□ 1.57
NPAS3-202ENST00000356141 ASXL2Q76L83 1435 aa24.87■■□□□ 1.57
NPAS3-202ENST00000356141 KIAA1107Q9UPP5 1409 aa24.86■■□□□ 1.57
NPAS3-202ENST00000356141 SPAG9O60271 1321 aaKnown RBP24.85■■□□□ 1.57
NPAS3-202ENST00000356141 RPRD2Q5VT52 1461 aaKnown RBP24.84■■□□□ 1.57
NPAS3-202ENST00000356141 UHRF1BP1LA0JNW5 1464 aa24.84■■□□□ 1.57
NPAS3-202ENST00000356141 WDR7Q9Y4E6 1490 aa24.84■■□□□ 1.57
NPAS3-202ENST00000356141 C11orf95C9JLR9 678 aaPredicted RBP24.83■■□□□ 1.57
NPAS3-202ENST00000356141 DCAF11Q8TEB1 546 aa24.83■■□□□ 1.57
NPAS3-202ENST00000356141 GTF3C3Q9Y5Q9 886 aa24.83■■□□□ 1.57
NPAS3-202ENST00000356141 EIF4G2P78344 907 aaKnown RBP eCLIP24.82■■□□□ 1.56
NPAS3-202ENST00000356141 SHANK2Q9UPX8 1470 aa24.82■■□□□ 1.56
NPAS3-202ENST00000356141 RSPH4AQ5TD94 716 aa24.8■■□□□ 1.56
NPAS3-202ENST00000356141 ARHGEF5Q12774 1597 aa24.79■■□□□ 1.56
NPAS3-202ENST00000356141 WASHC2AQ641Q2 1341 aa24.77■■□□□ 1.56
NPAS3-202ENST00000356141 SCAPERQ9BY12 1400 aa24.77■■□□□ 1.56
NPAS3-202ENST00000356141 FANCAO15360 1455 aa24.77■■□□□ 1.56
NPAS3-202ENST00000356141 TEX14Q8IWB6 1497 aa24.77■■□□□ 1.56
NPAS3-202ENST00000356141 KIF3BO15066 747 aa24.74■■□□□ 1.55
NPAS3-202ENST00000356141 FAM135AQ9P2D6 1515 aa24.71■■□□□ 1.55
NPAS3-202ENST00000356141 ANP32CO43423 234 aa24.71■■□□□ 1.55
NPAS3-202ENST00000356141 RAPGEF3O95398 923 aa24.7■■□□□ 1.54
NPAS3-202ENST00000356141 SENP3Q9H4L4 574 aaPredicted RBP24.7■■□□□ 1.54
NPAS3-202ENST00000356141 ABCC1P33527 1531 aa24.69■■□□□ 1.54
NPAS3-202ENST00000356141 DNAJC5Q9H3Z4 198 aa24.69■■□□□ 1.54
NPAS3-202ENST00000356141 ADGRL1O94910 1474 aa24.68■■□□□ 1.54
NPAS3-202ENST00000356141 CARD11Q9BXL7 1154 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms