RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 PRG4Q92954 1404 aaPredicted RBP21.14■□□□□ 0.98
RTN3-205ENST00000356000 RAB3GAP2Q9H2M9 1393 aa21.14■□□□□ 0.97
RTN3-205ENST00000356000 KIAA0586Q9BVV6 1533 aa21.14■□□□□ 0.97
RTN3-205ENST00000356000 KIF27Q86VH2 1401 aa21.11■□□□□ 0.97
RTN3-205ENST00000356000 SIN3AQ96ST3 1273 aa21.11■□□□□ 0.97
RTN3-205ENST00000356000 ZBED9Q6R2W3 1325 aa21.1■□□□□ 0.97
RTN3-205ENST00000356000 RRP9O43818 475 aaKnown RBP21.09■□□□□ 0.97
RTN3-205ENST00000356000 NPM2Q86SE8 214 aaKnown RBP21.09■□□□□ 0.97
RTN3-205ENST00000356000 KIF13AQ9H1H9 1805 aa21.09■□□□□ 0.97
RTN3-205ENST00000356000 CCNB3Q8WWL7 1395 aa21.07■□□□□ 0.96
RTN3-205ENST00000356000 HSP90AA2PQ14568 343 aaPredicted RBP21.07■□□□□ 0.96
RTN3-205ENST00000356000 NFKBIBQ15653 356 aa21.07■□□□□ 0.96
RTN3-205ENST00000356000 JPH4Q96JJ6 628 aa21.07■□□□□ 0.96
RTN3-205ENST00000356000 ABCC10Q5T3U5 1492 aa21.06■□□□□ 0.96
RTN3-205ENST00000356000 KANK4Q5T7N3 995 aaPredicted RBP21.05■□□□□ 0.96
RTN3-205ENST00000356000 RNF123Q5XPI4 1314 aa21.04■□□□□ 0.96
RTN3-205ENST00000356000 DCAF11Q8TEB1 546 aa21.04■□□□□ 0.96
RTN3-205ENST00000356000 NPM1P06748 294 aaKnown RBP eCLIP21.01■□□□□ 0.95
RTN3-205ENST00000356000 TCERG1O14776 1098 aaKnown RBP21■□□□□ 0.95
RTN3-205ENST00000356000 AEBP2Q6ZN18 517 aaPredicted RBP21■□□□□ 0.95
RTN3-205ENST00000356000 DIP2BQ9P265 1576 aa20.99■□□□□ 0.95
RTN3-205ENST00000356000 PDE4AP27815 886 aa20.98■□□□□ 0.95
RTN3-205ENST00000356000 RRAGDQ9NQL2 400 aaPredicted RBP20.98■□□□□ 0.95
RTN3-205ENST00000356000 IGF1RP08069 1367 aa20.97■□□□□ 0.95
RTN3-205ENST00000356000 SETD5Q9C0A6 1442 aa20.97■□□□□ 0.95
RTN3-205ENST00000356000 ADCY10Q96PN6 1610 aa20.97■□□□□ 0.95
RTN3-205ENST00000356000 SMG6Q86US8 1419 aaKnown RBP20.96■□□□□ 0.95
RTN3-205ENST00000356000 DDRGK1Q96HY6 314 aa20.96■□□□□ 0.95
RTN3-205ENST00000356000 BACH2Q9BYV9 841 aa20.96■□□□□ 0.95
RTN3-205ENST00000356000 CARMIL2Q6F5E8 1435 aa20.96■□□□□ 0.95
RTN3-205ENST00000356000 UHRF1BP1LA0JNW5 1464 aa20.95■□□□□ 0.94
RTN3-205ENST00000356000 AKNAQ7Z591 1439 aa20.94■□□□□ 0.94
RTN3-205ENST00000356000 HSP90AA1P07900 732 aaKnown RBP20.94■□□□□ 0.94
RTN3-205ENST00000356000 RBM10P98175 930 aaKnown RBP20.94■□□□□ 0.94
RTN3-205ENST00000356000 CCDC184Q52MB2 194 aa20.94■□□□□ 0.94
RTN3-205ENST00000356000 AAMPQ13685 434 aa20.93■□□□□ 0.94
RTN3-205ENST00000356000 GLI2P10070 1586 aa20.93■□□□□ 0.94
RTN3-205ENST00000356000 RAPGEF2Q9Y4G8 1499 aa20.91■□□□□ 0.94
RTN3-205ENST00000356000 MS4A1P11836 297 aa20.91■□□□□ 0.94
RTN3-205ENST00000356000 FGD1P98174 961 aa20.9■□□□□ 0.94
RTN3-205ENST00000356000 IQGAP2Q13576 1575 aa20.89■□□□□ 0.93
RTN3-205ENST00000356000 A0A0U1RQG5 324 aaPredicted RBP20.88■□□□□ 0.93
RTN3-205ENST00000356000 FAM9BQ8IZU0 186 aa20.87■□□□□ 0.93
RTN3-205ENST00000356000 PLB1Q6P1J6 1458 aa20.87■□□□□ 0.93
RTN3-205ENST00000356000 CARMIL1Q5VZK9 1371 aa20.86■□□□□ 0.93
RTN3-205ENST00000356000 NAP1L5Q96NT1 182 aaPredicted RBP20.86■□□□□ 0.93
RTN3-205ENST00000356000 ABCC2Q92887 1545 aa20.85■□□□□ 0.93
RTN3-205ENST00000356000 NUDCQ9Y266 331 aa20.85■□□□□ 0.93
RTN3-205ENST00000356000 PTPRGP23470 1445 aa20.83■□□□□ 0.93
RTN3-205ENST00000356000 UGGT2Q9NYU1 1516 aa20.83■□□□□ 0.92
RTN3-205ENST00000356000 KDM6BO15054 1643 aa20.82■□□□□ 0.92
RTN3-205ENST00000356000 RANGAP1P46060 587 aaPredicted RBP20.8■□□□□ 0.92
RTN3-205ENST00000356000 NCOA2Q15596 1464 aa20.8■□□□□ 0.92
RTN3-205ENST00000356000 PNNQ9H307 717 aaKnown RBP20.8■□□□□ 0.92
RTN3-205ENST00000356000 MRS2Q9HD23 443 aa20.8■□□□□ 0.92
RTN3-205ENST00000356000 FAM69CQ0P6D2 419 aa20.79■□□□□ 0.92
RTN3-205ENST00000356000 PRKRIP1Q9H875 184 aaPredicted RBP20.78■□□□□ 0.92
RTN3-205ENST00000356000 CNTLNQ9NXG0 1405 aa20.78■□□□□ 0.92
RTN3-205ENST00000356000 FRAT2O75474 233 aaPredicted RBP20.77■□□□□ 0.92
RTN3-205ENST00000356000 CLCN1P35523 988 aa20.77■□□□□ 0.92
RTN3-205ENST00000356000 PDE4CQ08493 712 aa20.77■□□□□ 0.92
RTN3-205ENST00000356000 CENPJQ9HC77 1338 aaPredicted RBP20.76■□□□□ 0.91
RTN3-205ENST00000356000 TONSLQ96HA7 1378 aa20.76■□□□□ 0.91
RTN3-205ENST00000356000 PRDM4Q9UKN5 801 aa20.74■□□□□ 0.91
RTN3-205ENST00000356000 CALD1Q05682 793 aaKnown RBP20.74■□□□□ 0.91
RTN3-205ENST00000356000 UACAQ9BZF9 1416 aa20.74■□□□□ 0.91
RTN3-205ENST00000356000 KDM5BQ9UGL1 1544 aa20.73■□□□□ 0.91
RTN3-205ENST00000356000 TEX14Q8IWB6 1497 aa20.72■□□□□ 0.91
RTN3-205ENST00000356000 L1TD1Q5T7N2 865 aaKnown RBP20.72■□□□□ 0.91
RTN3-205ENST00000356000 SLC4A3P48751 1232 aa20.71■□□□□ 0.91
RTN3-205ENST00000356000 DISP1Q96F81 1524 aa20.69■□□□□ 0.9
RTN3-205ENST00000356000 KIAA0556O60303 1618 aa20.69■□□□□ 0.9
RTN3-205ENST00000356000 CTTNBP2Q8WZ74 1663 aa20.68■□□□□ 0.9
RTN3-205ENST00000356000 MAP3K4Q9Y6R4 1608 aa20.67■□□□□ 0.9
RTN3-205ENST00000356000 ASXL2Q76L83 1435 aa20.66■□□□□ 0.9
RTN3-205ENST00000356000 PDCL3Q9H2J4 239 aa20.66■□□□□ 0.9
RTN3-205ENST00000356000 PPRC1Q5VV67 1664 aaKnown RBP20.64■□□□□ 0.89
RTN3-205ENST00000356000 HSPA5P11021 654 aaKnown RBP20.63■□□□□ 0.89
RTN3-205ENST00000356000 EXOC6Q8TAG9 804 aa20.61■□□□□ 0.89
RTN3-205ENST00000356000 EPRSP07814 1512 aaKnown RBP20.61■□□□□ 0.89
RTN3-205ENST00000356000 POGKQ9P215 609 aa20.61■□□□□ 0.89
RTN3-205ENST00000356000 ZCCHC11Q5TAX3 1644 aaKnown RBP20.61■□□□□ 0.89
RTN3-205ENST00000356000 CFAP43Q8NDM7 1665 aa20.58■□□□□ 0.89
RTN3-205ENST00000356000 RRP1P56182 461 aaKnown RBP20.58■□□□□ 0.89
RTN3-205ENST00000356000 TSPOAP1O95153 1857 aa20.56■□□□□ 0.88
RTN3-205ENST00000356000 TPM2P07951 284 aa20.56■□□□□ 0.88
RTN3-205ENST00000356000 RGS3P49796 1198 aa20.56■□□□□ 0.88
RTN3-205ENST00000356000 PDIA4P13667 645 aaKnown RBP20.55■□□□□ 0.88
RTN3-205ENST00000356000 WDR7Q9Y4E6 1490 aa20.55■□□□□ 0.88
RTN3-205ENST00000356000 MAGI3Q5TCQ9 1506 aa20.54■□□□□ 0.88
RTN3-205ENST00000356000 ABCA8O94911 1581 aa20.53■□□□□ 0.88
RTN3-205ENST00000356000 NCOA1Q15788 1441 aa20.53■□□□□ 0.88
RTN3-205ENST00000356000 CCDC7Q96M83 1385 aa20.53■□□□□ 0.88
RTN3-205ENST00000356000 MAP3K1Q13233 1512 aa20.53■□□□□ 0.88
RTN3-205ENST00000356000 PHLDB1Q86UU1 1377 aa20.52■□□□□ 0.87
RTN3-205ENST00000356000 XRCC6P12956 609 aaKnown RBP eCLIP20.51■□□□□ 0.87
RTN3-205ENST00000356000 EIF4G2P78344 907 aaKnown RBP eCLIP20.51■□□□□ 0.87
RTN3-205ENST00000356000 PRXQ9BXM0 1461 aa20.51■□□□□ 0.87
RTN3-205ENST00000356000 BCL11BQ9C0K0 894 aaPredicted RBP20.5■□□□□ 0.87
RTN3-205ENST00000356000 TIAM1Q13009 1591 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms