RNA–Protein interactions for RNA: ENST00000355371.8

SHTN1-202, Transcript of shootin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SHTN1, Length 5,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-202ENST00000355371 ROCK2O75116 1388 aaKnown RBP21.03■□□□□ 0.96
SHTN1-202ENST00000355371 ERICH6BQ5W0A0 696 aa21.03■□□□□ 0.96
SHTN1-202ENST00000355371 LMOD2Q6P5Q4 547 aa21.03■□□□□ 0.96
SHTN1-202ENST00000355371 FOXD1Q16676 465 aa21.02■□□□□ 0.96
SHTN1-202ENST00000355371 NOP58Q9Y2X3 529 aaKnown RBP21.02■□□□□ 0.96
SHTN1-202ENST00000355371 RSPH4AQ5TD94 716 aa21.01■□□□□ 0.95
SHTN1-202ENST00000355371 GGT6Q6P531 493 aa21.01■□□□□ 0.95
SHTN1-202ENST00000355371 ATAD2BQ9ULI0 1458 aa21■□□□□ 0.95
SHTN1-202ENST00000355371 CCDC18Q5T9S5 1454 aa21■□□□□ 0.95
SHTN1-202ENST00000355371 ZRSR1Q15695 479 aaKnown RBP21■□□□□ 0.95
SHTN1-202ENST00000355371 CDK11BP21127 795 aaKnown RBP20.99■□□□□ 0.95
SHTN1-202ENST00000355371 HDGFL2Q7Z4V5 671 aaPredicted RBP20.99■□□□□ 0.95
SHTN1-202ENST00000355371 FHOD3Q2V2M9 1422 aa20.98■□□□□ 0.95
SHTN1-202ENST00000355371 EIF3AQ14152 1382 aaKnown RBP20.97■□□□□ 0.95
SHTN1-202ENST00000355371 SMARCA4P51532 1647 aa20.96■□□□□ 0.95
SHTN1-202ENST00000355371 OS9Q13438 667 aaPredicted RBP20.96■□□□□ 0.95
SHTN1-202ENST00000355371 MLECQ14165 292 aa20.95■□□□□ 0.94
SHTN1-202ENST00000355371 CFAP44Q96MT7 982 aa20.95■□□□□ 0.94
SHTN1-202ENST00000355371 HSP90AB1P08238 724 aaKnown RBP20.94■□□□□ 0.94
SHTN1-202ENST00000355371 PTMAP06454 111 aaKnown RBP20.93■□□□□ 0.94
SHTN1-202ENST00000355371 SAFB2Q14151 953 aaKnown RBP eCLIP20.92■□□□□ 0.94
SHTN1-202ENST00000355371 IPO8O15397 1037 aaKnown RBP20.91■□□□□ 0.94
SHTN1-202ENST00000355371 CALD1Q05682 793 aaKnown RBP20.91■□□□□ 0.94
SHTN1-202ENST00000355371 L3MBTL2Q969R5 705 aa20.89■□□□□ 0.93
SHTN1-202ENST00000355371 STK26Q9P289 416 aa20.89■□□□□ 0.93
SHTN1-202ENST00000355371 RTF1Q92541 710 aaKnown RBP20.89■□□□□ 0.93
SHTN1-202ENST00000355371 RCAN3Q9UKA8 241 aa20.88■□□□□ 0.93
SHTN1-202ENST00000355371 HSCBQ8IWL3 235 aa20.88■□□□□ 0.93
SHTN1-202ENST00000355371 HNRNPMP52272 730 aaKnown RBP eCLIP20.86■□□□□ 0.93
SHTN1-202ENST00000355371 KCNJ4P48050 445 aa20.85■□□□□ 0.93
SHTN1-202ENST00000355371 KIF3BO15066 747 aa20.84■□□□□ 0.93
SHTN1-202ENST00000355371 SPAG9O60271 1321 aaKnown RBP20.84■□□□□ 0.93
SHTN1-202ENST00000355371 MCCP23508 829 aa20.84■□□□□ 0.93
SHTN1-202ENST00000355371 U2AF1L5P0DN76 240 aaPredicted RBP20.83■□□□□ 0.93
SHTN1-202ENST00000355371 U2AF1Q01081 240 aaKnown RBP eCLIP20.83■□□□□ 0.936e-8■■■■■ 27.5
SHTN1-202ENST00000355371 FGD1P98174 961 aa20.83■□□□□ 0.93
SHTN1-202ENST00000355371 SOX12O15370 315 aa20.82■□□□□ 0.92
SHTN1-202ENST00000355371 JPH4Q96JJ6 628 aa20.82■□□□□ 0.92
SHTN1-202ENST00000355371 TRHP20396 242 aaPredicted RBP20.81■□□□□ 0.92
SHTN1-202ENST00000355371 FANCD2Q9BXW9 1451 aa20.8■□□□□ 0.92
SHTN1-202ENST00000355371 NLRP13Q86W25 1043 aa20.8■□□□□ 0.92
SHTN1-202ENST00000355371 RWDD1Q9H446 243 aaPredicted RBP20.79■□□□□ 0.92
SHTN1-202ENST00000355371 TERF2IPQ9NYB0 399 aa20.79■□□□□ 0.92
SHTN1-202ENST00000355371 PDE3BQ13370 1112 aa20.78■□□□□ 0.92
SHTN1-202ENST00000355371 DHX57Q6P158 1386 aaKnown RBP20.78■□□□□ 0.92
SHTN1-202ENST00000355371 PHLDB1Q86UU1 1377 aa20.78■□□□□ 0.92
SHTN1-202ENST00000355371 TCERG1O14776 1098 aaKnown RBP20.77■□□□□ 0.92
SHTN1-202ENST00000355371 CHMP4AQ9BY43 222 aa20.77■□□□□ 0.92
SHTN1-202ENST00000355371 RBM19Q9Y4C8 960 aaKnown RBP20.77■□□□□ 0.92
SHTN1-202ENST00000355371 DNTTIP2Q5QJE6 756 aaKnown RBP20.77■□□□□ 0.91
SHTN1-202ENST00000355371 NPHP1O15259 732 aa20.76■□□□□ 0.91
SHTN1-202ENST00000355371 TPRNQ4KMQ1 711 aa20.75■□□□□ 0.91
SHTN1-202ENST00000355371 RUSC2Q8N2Y8 1516 aa20.74■□□□□ 0.91
SHTN1-202ENST00000355371 GOLGA6L6A8MZA4 724 aa20.73■□□□□ 0.91
SHTN1-202ENST00000355371 GOLGA2Q08379 1002 aa20.73■□□□□ 0.91
SHTN1-202ENST00000355371 KIF15Q9NS87 1388 aa20.73■□□□□ 0.91
SHTN1-202ENST00000355371 PMFBP1Q8TBY8 1022 aa20.73■□□□□ 0.91
SHTN1-202ENST00000355371 WASHC2CQ9Y4E1 1318 aa20.73■□□□□ 0.91
SHTN1-202ENST00000355371 CCDC144AA2RUR9 1427 aa20.72■□□□□ 0.91
SHTN1-202ENST00000355371 ITPRIPQ8IWB1 547 aa20.71■□□□□ 0.91
SHTN1-202ENST00000355371 GOLGA6L4A6NEF3 574 aa20.7■□□□□ 0.9
SHTN1-202ENST00000355371 UACAQ9BZF9 1416 aa20.7■□□□□ 0.9
SHTN1-202ENST00000355371 L1TD1Q5T7N2 865 aaKnown RBP20.7■□□□□ 0.9
SHTN1-202ENST00000355371 NAP1L2Q9ULW6 460 aaPredicted RBP20.68■□□□□ 0.9
SHTN1-202ENST00000355371 MYBBP1AQ9BQG0 1328 aaKnown RBP20.68■□□□□ 0.9
SHTN1-202ENST00000355371 PLCB2Q00722 1185 aa20.68■□□□□ 0.9
SHTN1-202ENST00000355371 NRDCO43847 1150 aa20.67■□□□□ 0.9
SHTN1-202ENST00000355371 PAK3O75914 559 aaPredicted RBP20.67■□□□□ 0.9
SHTN1-202ENST00000355371 PTMSP20962 102 aa20.66■□□□□ 0.9
SHTN1-202ENST00000355371 LMOD3Q0VAK6 560 aa20.65■□□□□ 0.9
SHTN1-202ENST00000355371 PTPRGP23470 1445 aa20.65■□□□□ 0.9
SHTN1-202ENST00000355371 KIAA1211Q6ZU35 1233 aa20.65■□□□□ 0.9
SHTN1-202ENST00000355371 EID1Q9Y6B2 187 aa20.65■□□□□ 0.9
SHTN1-202ENST00000355371 STK31Q9BXU1 1019 aa20.64■□□□□ 0.9
SHTN1-202ENST00000355371 SMC4Q9NTJ3 1288 aa20.64■□□□□ 0.89
SHTN1-202ENST00000355371 HDAC5Q9UQL6 1122 aa20.63■□□□□ 0.89
SHTN1-202ENST00000355371 CENPJQ9HC77 1338 aaPredicted RBP20.63■□□□□ 0.89
SHTN1-202ENST00000355371 ST20-MTHFSA0A0A6YYL1 179 aa20.62■□□□□ 0.89
SHTN1-202ENST00000355371 IGF1RP08069 1367 aa20.62■□□□□ 0.89
SHTN1-202ENST00000355371 NAP1L5Q96NT1 182 aaPredicted RBP20.61■□□□□ 0.89
SHTN1-202ENST00000355371 FGD5Q6ZNL6 1462 aa20.61■□□□□ 0.89
SHTN1-202ENST00000355371 GBP4Q96PP9 640 aa20.61■□□□□ 0.89
SHTN1-202ENST00000355371 APBB1O00213 710 aa20.6■□□□□ 0.89
SHTN1-202ENST00000355371 GAPVD1Q14C86 1478 aa20.6■□□□□ 0.89
SHTN1-202ENST00000355371 HMMRO75330 724 aa20.59■□□□□ 0.89
SHTN1-202ENST00000355371 CSB-PGBD3P0DP91 1061 aa20.59■□□□□ 0.89
SHTN1-202ENST00000355371 CCDC146Q8IYE0 955 aa20.58■□□□□ 0.89
SHTN1-202ENST00000355371 SPRYD3Q8NCJ5 442 aa20.58■□□□□ 0.89
SHTN1-202ENST00000355371 TAOK2Q9UL54 1235 aa20.58■□□□□ 0.89
SHTN1-202ENST00000355371 PANK3Q9H999 370 aa20.58■□□□□ 0.88
SHTN1-202ENST00000355371 MYOM3Q5VTT5 1437 aa20.57■□□□□ 0.88
SHTN1-202ENST00000355371 TRAK1Q9UPV9 953 aa20.57■□□□□ 0.88
SHTN1-202ENST00000355371 CUX1P39880 1505 aa20.56■□□□□ 0.88
SHTN1-202ENST00000355371 USP47Q96K76 1375 aa20.56■□□□□ 0.88
SHTN1-202ENST00000355371 VGFO15240 615 aaPredicted RBP20.55■□□□□ 0.88
SHTN1-202ENST00000355371 PRKRIP1Q9H875 184 aaPredicted RBP20.55■□□□□ 0.88
SHTN1-202ENST00000355371 NGDNQ8NEJ9 315 aaKnown RBP20.55■□□□□ 0.88
SHTN1-202ENST00000355371 NUTM2DQ5VT03 806 aaPredicted RBP20.54■□□□□ 0.88
SHTN1-202ENST00000355371 DEKP35659 375 aaKnown RBP20.53■□□□□ 0.88
SHTN1-202ENST00000355371 GPATCH3Q96I76 525 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms