RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 SPRYD3Q8NCJ5 442 aa16.9■□□□□ 0.3
SCN8A-202ENST00000355133 HDGFL2Q7Z4V5 671 aaPredicted RBP16.89■□□□□ 0.29
SCN8A-202ENST00000355133 HSCBQ8IWL3 235 aa16.88■□□□□ 0.29
SCN8A-202ENST00000355133 GOLGA6L4A6NEF3 574 aa16.88■□□□□ 0.29
SCN8A-202ENST00000355133 ISY1Q9ULR0 285 aaKnown RBP16.87■□□□□ 0.29
SCN8A-202ENST00000355133 BAZ1AQ9NRL2 1556 aaPredicted RBP16.87■□□□□ 0.29
SCN8A-202ENST00000355133 GOLGA6L6A8MZA4 724 aa16.86■□□□□ 0.29
SCN8A-202ENST00000355133 RTN4Q9NQC3 1192 aaKnown RBP16.86■□□□□ 0.29
SCN8A-202ENST00000355133 ZNF330Q9Y3S2 320 aaPredicted RBP16.86■□□□□ 0.29
SCN8A-202ENST00000355133 CECR2Q9BXF3 1484 aa16.85■□□□□ 0.29
SCN8A-202ENST00000355133 NAP1L5Q96NT1 182 aaPredicted RBP16.85■□□□□ 0.29
SCN8A-202ENST00000355133 SETD5Q9C0A6 1442 aa16.85■□□□□ 0.29
SCN8A-202ENST00000355133 CSB-PGBD3P0DP91 1061 aa16.85■□□□□ 0.29
SCN8A-202ENST00000355133 ARHGAP35Q9NRY4 1499 aa16.85■□□□□ 0.29
SCN8A-202ENST00000355133 MCCP23508 829 aa16.84■□□□□ 0.29
SCN8A-202ENST00000355133 ERICH6BQ5W0A0 696 aa16.84■□□□□ 0.29
SCN8A-202ENST00000355133 KTN1Q86UP2 1357 aaKnown RBP16.84■□□□□ 0.29
SCN8A-202ENST00000355133 U2AF1L5P0DN76 240 aaPredicted RBP16.83■□□□□ 0.28
SCN8A-202ENST00000355133 U2AF1Q01081 240 aaKnown RBP eCLIP16.83■□□□□ 0.28
SCN8A-202ENST00000355133 KANK4Q5T7N3 995 aaPredicted RBP16.82■□□□□ 0.28
SCN8A-202ENST00000355133 CLSTN1O94985 981 aa16.81■□□□□ 0.28
SCN8A-202ENST00000355133 ROCK2O75116 1388 aaKnown RBP16.81■□□□□ 0.28
SCN8A-202ENST00000355133 TIMELESSQ9UNS1 1208 aa16.8■□□□□ 0.28
SCN8A-202ENST00000355133 CARMIL2Q6F5E8 1435 aa16.79■□□□□ 0.28
SCN8A-202ENST00000355133 NUP155O75694 1391 aa16.78■□□□□ 0.28
SCN8A-202ENST00000355133 IPO8O15397 1037 aaKnown RBP16.78■□□□□ 0.28
SCN8A-202ENST00000355133 CCER2I3L3R5 266 aa16.78■□□□□ 0.28
SCN8A-202ENST00000355133 NRDCO43847 1150 aa16.78■□□□□ 0.28
SCN8A-202ENST00000355133 ITPRIPQ8IWB1 547 aa16.78■□□□□ 0.28
SCN8A-202ENST00000355133 NUTM2DQ5VT03 806 aaPredicted RBP16.77■□□□□ 0.28
SCN8A-202ENST00000355133 MPHOSPH9Q99550 1183 aa16.77■□□□□ 0.28
SCN8A-202ENST00000355133 GNL2Q13823 731 aaKnown RBP16.76■□□□□ 0.27
SCN8A-202ENST00000355133 EFCAB2Q5VUJ9 269 aa16.76■□□□□ 0.27
SCN8A-202ENST00000355133 NCBP3Q53F19 620 aaKnown RBP16.75■□□□□ 0.27
SCN8A-202ENST00000355133 KIAA1211Q6ZU35 1233 aa16.75■□□□□ 0.27
SCN8A-202ENST00000355133 TDRD9Q8NDG6 1382 aaKnown RBP16.75■□□□□ 0.27
SCN8A-202ENST00000355133 KIF3BO15066 747 aa16.74■□□□□ 0.27
SCN8A-202ENST00000355133 DRC7Q8IY82 874 aa16.74■□□□□ 0.27
SCN8A-202ENST00000355133 CCDC9Q9Y3X0 531 aaKnown RBP16.74■□□□□ 0.27
SCN8A-202ENST00000355133 CALD1Q05682 793 aaKnown RBP16.72■□□□□ 0.27
SCN8A-202ENST00000355133 VPS8Q8N3P4 1428 aa16.72■□□□□ 0.27
SCN8A-202ENST00000355133 HNRNPMP52272 730 aaKnown RBP eCLIP16.72■□□□□ 0.27
SCN8A-202ENST00000355133 RCAN3Q9UKA8 241 aa16.72■□□□□ 0.27
SCN8A-202ENST00000355133 ANKRD30AQ9BXX3 1397 aa16.7■□□□□ 0.26
SCN8A-202ENST00000355133 CHMP3Q9Y3E7 222 aa16.7■□□□□ 0.26
SCN8A-202ENST00000355133 ABCC8Q09428 1581 aa16.7■□□□□ 0.26
SCN8A-202ENST00000355133 CFAP44Q96MT7 982 aa16.7■□□□□ 0.26
SCN8A-202ENST00000355133 RALBP1Q15311 655 aa16.7■□□□□ 0.26
SCN8A-202ENST00000355133 RAB3GAP2Q9H2M9 1393 aa16.69■□□□□ 0.26
SCN8A-202ENST00000355133 RWDD1Q9H446 243 aaPredicted RBP16.69■□□□□ 0.26
SCN8A-202ENST00000355133 STK31Q9BXU1 1019 aa16.68■□□□□ 0.26
SCN8A-202ENST00000355133 CCDC88BA6NC98 1476 aa16.67■□□□□ 0.26
SCN8A-202ENST00000355133 CCDC146Q8IYE0 955 aa16.67■□□□□ 0.26
SCN8A-202ENST00000355133 SPAG9O60271 1321 aaKnown RBP16.67■□□□□ 0.26
SCN8A-202ENST00000355133 NUTM2FA1L443 756 aa16.67■□□□□ 0.26
SCN8A-202ENST00000355133 GORABQ5T7V8 394 aa16.67■□□□□ 0.26
SCN8A-202ENST00000355133 PDS5BQ9NTI5 1447 aa16.67■□□□□ 0.26
SCN8A-202ENST00000355133 CHAF1AQ13111 956 aaPredicted RBP16.67■□□□□ 0.26
SCN8A-202ENST00000355133 EIF3AQ14152 1382 aaKnown RBP16.66■□□□□ 0.26
SCN8A-202ENST00000355133 NGDNQ8NEJ9 315 aaKnown RBP16.66■□□□□ 0.26
SCN8A-202ENST00000355133 SMC4Q9NTJ3 1288 aa16.66■□□□□ 0.26
SCN8A-202ENST00000355133 MSNP26038 577 aaKnown RBP16.66■□□□□ 0.26
SCN8A-202ENST00000355133 LTV1Q96GA3 475 aaPredicted RBP16.65■□□□□ 0.26
SCN8A-202ENST00000355133 TERF2IPQ9NYB0 399 aa16.65■□□□□ 0.26
SCN8A-202ENST00000355133 EID1Q9Y6B2 187 aa16.65■□□□□ 0.26
SCN8A-202ENST00000355133 SLC4A10Q6U841 1118 aa16.64■□□□□ 0.25
SCN8A-202ENST00000355133 WASHC2CQ9Y4E1 1318 aa16.64■□□□□ 0.25
SCN8A-202ENST00000355133 FMN1Q68DA7 1419 aa16.64■□□□□ 0.25
SCN8A-202ENST00000355133 TAF7LQ5H9L4 462 aa16.64■□□□□ 0.25
SCN8A-202ENST00000355133 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.64■□□□□ 0.25
SCN8A-202ENST00000355133 L1TD1Q5T7N2 865 aaKnown RBP16.63■□□□□ 0.25
SCN8A-202ENST00000355133 TMX4Q9H1E5 349 aaPredicted RBP16.63■□□□□ 0.25
SCN8A-202ENST00000355133 CLUAP1Q96AJ1 413 aa16.63■□□□□ 0.25
SCN8A-202ENST00000355133 SLKQ9H2G2 1235 aaPredicted RBP16.63■□□□□ 0.25
SCN8A-202ENST00000355133 TRIM6-TRIM34B2RNG4 842 aa16.62■□□□□ 0.25
SCN8A-202ENST00000355133 RBM19Q9Y4C8 960 aaKnown RBP16.62■□□□□ 0.25
SCN8A-202ENST00000355133 MFAP1P55081 439 aaKnown RBP16.62■□□□□ 0.25
SCN8A-202ENST00000355133 AMPHP49418 695 aa16.62■□□□□ 0.25
SCN8A-202ENST00000355133 L3MBTL2Q969R5 705 aa16.61■□□□□ 0.25
SCN8A-202ENST00000355133 GZF1Q9H116 711 aaPredicted RBP16.61■□□□□ 0.25
SCN8A-202ENST00000355133 PMFBP1Q8TBY8 1022 aa16.59■□□□□ 0.25
SCN8A-202ENST00000355133 GBP4Q96PP9 640 aa16.59■□□□□ 0.25
SCN8A-202ENST00000355133 TRAK1Q9UPV9 953 aa16.59■□□□□ 0.25
SCN8A-202ENST00000355133 HSP90B1P14625 803 aaKnown RBP16.59■□□□□ 0.25
SCN8A-202ENST00000355133 MROH2BQ7Z745 1585 aa16.59■□□□□ 0.25
SCN8A-202ENST00000355133 GPATCH3Q96I76 525 aa16.58■□□□□ 0.25
SCN8A-202ENST00000355133 AMER1Q5JTC6 1135 aaPredicted RBP16.57■□□□□ 0.24
SCN8A-202ENST00000355133 CHMP4AQ9BY43 222 aa16.57■□□□□ 0.24
SCN8A-202ENST00000355133 FHOD3Q2V2M9 1422 aa16.57■□□□□ 0.24
SCN8A-202ENST00000355133 NOL8Q76FK4 1167 aaKnown RBP16.57■□□□□ 0.24
SCN8A-202ENST00000355133 DEKP35659 375 aaKnown RBP16.57■□□□□ 0.24
SCN8A-202ENST00000355133 HMMRO75330 724 aa16.56■□□□□ 0.24
SCN8A-202ENST00000355133 G3V3G9 751 aa16.55■□□□□ 0.24
SCN8A-202ENST00000355133 DCAF8Q5TAQ9 597 aa16.55■□□□□ 0.24
SCN8A-202ENST00000355133 RRP7AQ9Y3A4 280 aaKnown RBP16.55■□□□□ 0.24
SCN8A-202ENST00000355133 TCERG1O14776 1098 aaKnown RBP16.54■□□□□ 0.24
SCN8A-202ENST00000355133 CENPJQ9HC77 1338 aaPredicted RBP16.54■□□□□ 0.24
SCN8A-202ENST00000355133 FOXD4L1Q9NU39 408 aa16.54■□□□□ 0.24
SCN8A-202ENST00000355133 HTATSF1O43719 755 aaKnown RBP16.53■□□□□ 0.24
SCN8A-202ENST00000355133 SMARCA2P51531 1590 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms