RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 C14orf37Q86TY3 774 aa15.63■□□□□ 0.09
SND1-201ENST00000354725 DHX57Q6P158 1386 aaKnown RBP15.63■□□□□ 0.09
SND1-201ENST00000354725 GLI2P10070 1586 aa15.62■□□□□ 0.09
SND1-201ENST00000354725 PPRC1Q5VV67 1664 aaKnown RBP15.61■□□□□ 0.09
SND1-201ENST00000354725 MAP3K4Q9Y6R4 1608 aa15.6■□□□□ 0.09
SND1-201ENST00000354725 EPRSP07814 1512 aaKnown RBP15.6■□□□□ 0.09
SND1-201ENST00000354725 MAGI3Q5TCQ9 1506 aa15.59■□□□□ 0.09
SND1-201ENST00000354725 P3H3Q8IVL6 736 aa15.59■□□□□ 0.09
SND1-201ENST00000354725 TPRNQ4KMQ1 711 aa15.58■□□□□ 0.08
SND1-201ENST00000354725 CDK13Q14004 1512 aaKnown RBP15.57■□□□□ 0.08
SND1-201ENST00000354725 A0A0U1RQG5 324 aaPredicted RBP15.57■□□□□ 0.08
SND1-201ENST00000354725 SALL2Q9Y467 1007 aaPredicted RBP15.56■□□□□ 0.08
SND1-201ENST00000354725 ABCC10Q5T3U5 1492 aa15.56■□□□□ 0.08
SND1-201ENST00000354725 ASXL2Q76L83 1435 aa15.55■□□□□ 0.08
SND1-201ENST00000354725 ABCA9Q8IUA7 1624 aa15.55■□□□□ 0.08
SND1-201ENST00000354725 TIAM1Q13009 1591 aa15.55■□□□□ 0.08
SND1-201ENST00000354725 AMER1Q5JTC6 1135 aaPredicted RBP15.55■□□□□ 0.08
SND1-201ENST00000354725 NPM2Q86SE8 214 aaKnown RBP15.54■□□□□ 0.08
SND1-201ENST00000354725 WDR7Q9Y4E6 1490 aa15.54■□□□□ 0.08
SND1-201ENST00000354725 CCDC18Q5T9S5 1454 aa15.54■□□□□ 0.08
SND1-201ENST00000354725 BCL11BQ9C0K0 894 aaPredicted RBP15.53■□□□□ 0.08
SND1-201ENST00000354725 TAOK2Q9UL54 1235 aa15.53■□□□□ 0.08
SND1-201ENST00000354725 MIER1Q8N108 512 aa15.51■□□□□ 0.07
SND1-201ENST00000354725 YTHDC1Q96MU7 727 aaKnown RBP15.51■□□□□ 0.07
SND1-201ENST00000354725 HNRNPUL2Q1KMD3 747 aaKnown RBP15.51■□□□□ 0.07
SND1-201ENST00000354725 KIF14Q15058 1648 aa15.5■□□□□ 0.07
SND1-201ENST00000354725 KANK4Q5T7N3 995 aaPredicted RBP15.48■□□□□ 0.07
SND1-201ENST00000354725 TTC37Q6PGP7 1564 aa15.48■□□□□ 0.07
SND1-201ENST00000354725 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.48■□□□□ 0.072e-6■■■■□ 20.5
SND1-201ENST00000354725 NEFLP07196 543 aa15.47■□□□□ 0.07
SND1-201ENST00000354725 SUPT16HQ9Y5B9 1047 aaKnown RBP15.46■□□□□ 0.07
SND1-201ENST00000354725 CDC42BPAQ5VT25 1732 aa15.44■□□□□ 0.06
SND1-201ENST00000354725 CHMP4AQ9BY43 222 aa15.44■□□□□ 0.06
SND1-201ENST00000354725 CDC42BPBQ9Y5S2 1711 aa15.44■□□□□ 0.06
SND1-201ENST00000354725 CCNB3Q8WWL7 1395 aa15.44■□□□□ 0.06
SND1-201ENST00000354725 TROQ12816 1431 aaPredicted RBP15.41■□□□□ 0.06
SND1-201ENST00000354725 EHBP1L1Q8N3D4 1523 aa15.41■□□□□ 0.06
SND1-201ENST00000354725 ARAP3Q8WWN8 1544 aa15.41■□□□□ 0.06
SND1-201ENST00000354725 ERICH6BQ5W0A0 696 aa15.41■□□□□ 0.06
SND1-201ENST00000354725 MYO5CQ9NQX4 1742 aa15.41■□□□□ 0.06
SND1-201ENST00000354725 PREX2Q70Z35 1606 aa15.41■□□□□ 0.06
SND1-201ENST00000354725 LRRC9Q6ZRR7 1453 aa15.4■□□□□ 0.06
SND1-201ENST00000354725 TSPOAP1O95153 1857 aa15.37■□□□□ 0.05
SND1-201ENST00000354725 SUPT6HQ7KZ85 1726 aaKnown RBP15.36■□□□□ 0.05
SND1-201ENST00000354725 MYT1LQ9UL68 1186 aa15.34■□□□□ 0.05
SND1-201ENST00000354725 NPM1P06748 294 aaKnown RBP eCLIP15.33■□□□□ 0.05
SND1-201ENST00000354725 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.33■□□□□ 0.044e-6■■■■□ 20
SND1-201ENST00000354725 CFAP74Q9C0B2 1584 aa15.33■□□□□ 0.04
SND1-201ENST00000354725 FRMPD1Q5SYB0 1578 aa15.32■□□□□ 0.04
SND1-201ENST00000354725 ITSN2Q9NZM3 1697 aa15.31■□□□□ 0.04
SND1-201ENST00000354725 RICTORQ6R327 1708 aa15.31■□□□□ 0.04
SND1-201ENST00000354725 RAB3GAP2Q9H2M9 1393 aa15.3■□□□□ 0.04
SND1-201ENST00000354725 DEKP35659 375 aaKnown RBP15.3■□□□□ 0.04
SND1-201ENST00000354725 GPATCH8Q9UKJ3 1502 aaKnown RBP15.29■□□□□ 0.04
SND1-201ENST00000354725 PLCH2O75038 1416 aa15.29■□□□□ 0.04
SND1-201ENST00000354725 ARID3CA6NKF2 412 aa15.29■□□□□ 0.04
SND1-201ENST00000354725 SAMD9LQ8IVG5 1584 aa15.28■□□□□ 0.04
SND1-201ENST00000354725 PHLDB1Q86UU1 1377 aa15.28■□□□□ 0.04
SND1-201ENST00000354725 CD109Q6YHK3 1445 aa15.28■□□□□ 0.04
SND1-201ENST00000354725 IRX6P78412 446 aaPredicted RBP15.27■□□□□ 0.04
SND1-201ENST00000354725 NCOA2Q15596 1464 aa15.27■□□□□ 0.04
SND1-201ENST00000354725 NEO1Q92859 1461 aa15.27■□□□□ 0.04
SND1-201ENST00000354725 FAM69CQ0P6D2 419 aa15.27■□□□□ 0.03
SND1-201ENST00000354725 PLEKHD1A6NEE1 506 aa15.26■□□□□ 0.03
SND1-201ENST00000354725 SETD5Q9C0A6 1442 aa15.26■□□□□ 0.03
SND1-201ENST00000354725 COL17A1Q9UMD9 1497 aaPredicted RBP15.26■□□□□ 0.03
SND1-201ENST00000354725 ABCC1P33527 1531 aa15.25■□□□□ 0.03
SND1-201ENST00000354725 TEX14Q8IWB6 1497 aa15.24■□□□□ 0.03
SND1-201ENST00000354725 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.24■□□□□ 0.03
SND1-201ENST00000354725 RBM19Q9Y4C8 960 aaKnown RBP15.23■□□□□ 0.03
SND1-201ENST00000354725 MSH5O43196 834 aa15.23■□□□□ 0.03
SND1-201ENST00000354725 ARHGEF12Q9NZN5 1544 aa15.23■□□□□ 0.03
SND1-201ENST00000354725 KDM5CP41229 1560 aa15.22■□□□□ 0.03
SND1-201ENST00000354725 PAXIP1Q6ZW49 1069 aaPredicted RBP15.22■□□□□ 0.03
SND1-201ENST00000354725 ZMYM4Q5VZL5 1548 aa15.22■□□□□ 0.03
SND1-201ENST00000354725 CDK11AQ9UQ88 783 aaPredicted RBP15.2■□□□□ 0.02
SND1-201ENST00000354725 FANCAO15360 1455 aa15.2■□□□□ 0.02
SND1-201ENST00000354725 CROCC2H7BZ55 1655 aa15.2■□□□□ 0.02
SND1-201ENST00000354725 TCOF1Q13428 1488 aaKnown RBP15.2■□□□□ 0.02
SND1-201ENST00000354725 KDM6BO15054 1643 aa15.19■□□□□ 0.02
SND1-201ENST00000354725 MTUS2Q5JR59 1369 aa15.19■□□□□ 0.02
SND1-201ENST00000354725 KCNH8Q96L42 1107 aa15.18■□□□□ 0.02
SND1-201ENST00000354725 SIGLEC1Q9BZZ2 1709 aa15.17■□□□□ 0.02
SND1-201ENST00000354725 AKNAQ7Z591 1439 aa15.17■□□□□ 0.02
SND1-201ENST00000354725 MBD5Q9P267 1494 aa15.17■□□□□ 0.02
SND1-201ENST00000354725 ARHGEF5Q12774 1597 aa15.17■□□□□ 0.02
SND1-201ENST00000354725 ARHGAP5Q13017 1502 aa15.16■□□□□ 0.02
SND1-201ENST00000354725 ATP1B4Q9UN42 357 aaPredicted RBP15.16■□□□□ 0.02
SND1-201ENST00000354725 PTPN23Q9H3S7 1636 aa15.15■□□□□ 0.02
SND1-201ENST00000354725 MYOM3Q5VTT5 1437 aa15.15■□□□□ 0.02
SND1-201ENST00000354725 MIA2Q96PC5 1412 aa15.15■□□□□ 0.02
SND1-201ENST00000354725 CFAP44Q96MT7 982 aa15.15■□□□□ 0.02
SND1-201ENST00000354725 INO80Q9ULG1 1556 aaPredicted RBP15.15■□□□□ 0.02
SND1-201ENST00000354725 KIAA1107Q9UPP5 1409 aa15.14■□□□□ 0.01
SND1-201ENST00000354725 KIDINS220Q9ULH0 1771 aa15.14■□□□□ 0.01
SND1-201ENST00000354725 TRHP20396 242 aaPredicted RBP15.13■□□□□ 0.01
SND1-201ENST00000354725 FGD1P98174 961 aa15.13■□□□□ 0.01
SND1-201ENST00000354725 CAMSAP2Q08AD1 1489 aa15.13■□□□□ 0.01
SND1-201ENST00000354725 POGZQ7Z3K3 1410 aa15.13■□□□□ 0.01
SND1-201ENST00000354725 MAST1Q9Y2H9 1570 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms