RNA–Protein interactions for RNA: ENST00000354662.5

LMO3-204, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMO3, Length 3,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-204ENST00000354662 GAPVD1Q14C86 1478 aa10.99□□□□□ -0.65
LMO3-204ENST00000354662 AEBP2Q6ZN18 517 aaPredicted RBP10.99□□□□□ -0.65
LMO3-204ENST00000354662 FYCO1Q9BQS8 1478 aa10.99□□□□□ -0.65
LMO3-204ENST00000354662 UGGT2Q9NYU1 1516 aa10.98□□□□□ -0.65
LMO3-204ENST00000354662 EIF4G3O43432 1585 aaKnown RBP10.98□□□□□ -0.65
LMO3-204ENST00000354662 BRD2P25440 801 aaKnown RBP10.97□□□□□ -0.65
LMO3-204ENST00000354662 STAC3Q96MF2 364 aa10.97□□□□□ -0.65
LMO3-204ENST00000354662 RRBP1Q9P2E9 1410 aaKnown RBP10.96□□□□□ -0.65
LMO3-204ENST00000354662 SNAPC4Q5SXM2 1469 aa10.96□□□□□ -0.65
LMO3-204ENST00000354662 BBXQ8WY36 941 aaPredicted RBP10.96□□□□□ -0.65
LMO3-204ENST00000354662 PCF11O94913 1555 aaKnown RBP10.96□□□□□ -0.66
LMO3-204ENST00000354662 FHAD1B1AJZ9 1412 aa10.95□□□□□ -0.66
LMO3-204ENST00000354662 NFKBIBQ15653 356 aa10.95□□□□□ -0.66
LMO3-204ENST00000354662 GRIN2BQ13224 1484 aa10.94□□□□□ -0.66
LMO3-204ENST00000354662 CHRM1P11229 460 aaPredicted RBP10.94□□□□□ -0.66
LMO3-204ENST00000354662 B4GALNT3Q6L9W6 998 aa10.94□□□□□ -0.66
LMO3-204ENST00000354662 ARHGEF11O15085 1522 aa10.94□□□□□ -0.66
LMO3-204ENST00000354662 RGS3P49796 1198 aa10.93□□□□□ -0.66
LMO3-204ENST00000354662 MAGI1Q96QZ7 1491 aaPredicted RBP10.93□□□□□ -0.66
LMO3-204ENST00000354662 TPM2P07951 284 aa10.93□□□□□ -0.66
LMO3-204ENST00000354662 CASKIN1Q8WXD9 1431 aa10.93□□□□□ -0.66
LMO3-204ENST00000354662 LAS1LQ9Y4W2 734 aaKnown RBP10.93□□□□□ -0.66
LMO3-204ENST00000354662 SMAP1Q8IYB5 467 aaPredicted RBP10.92□□□□□ -0.66
LMO3-204ENST00000354662 NAP1L5Q96NT1 182 aaPredicted RBP10.92□□□□□ -0.66
LMO3-204ENST00000354662 PNNQ9H307 717 aaKnown RBP10.92□□□□□ -0.66
LMO3-204ENST00000354662 RNF123Q5XPI4 1314 aa10.92□□□□□ -0.66
LMO3-204ENST00000354662 IQGAP2Q13576 1575 aa10.92□□□□□ -0.66
LMO3-204ENST00000354662 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.92□□□□□ -0.66
LMO3-204ENST00000354662 NCLP19338 710 aaKnown RBP10.91□□□□□ -0.66
LMO3-204ENST00000354662 IRX6P78412 446 aaPredicted RBP10.91□□□□□ -0.66
LMO3-204ENST00000354662 ANP32CO43423 234 aa10.91□□□□□ -0.66
LMO3-204ENST00000354662 CANXP27824 592 aaKnown RBP10.9□□□□□ -0.66
LMO3-204ENST00000354662 PAXIP1Q6ZW49 1069 aaPredicted RBP10.9□□□□□ -0.66
LMO3-204ENST00000354662 VGFO15240 615 aaPredicted RBP10.9□□□□□ -0.66
LMO3-204ENST00000354662 UTP14CQ5TAP6 766 aaKnown RBP10.9□□□□□ -0.66
LMO3-204ENST00000354662 DDRGK1Q96HY6 314 aa10.89□□□□□ -0.67
LMO3-204ENST00000354662 HNRNPUL2Q1KMD3 747 aaKnown RBP10.89□□□□□ -0.67
LMO3-204ENST00000354662 CHMP4BQ9H444 224 aaKnown RBP10.88□□□□□ -0.67
LMO3-204ENST00000354662 ADCY10Q96PN6 1610 aa10.87□□□□□ -0.67
LMO3-204ENST00000354662 SHROOM2Q13796 1616 aa10.87□□□□□ -0.67
LMO3-204ENST00000354662 L1TD1Q5T7N2 865 aaKnown RBP10.87□□□□□ -0.67
LMO3-204ENST00000354662 TEX2Q8IWB9 1127 aa10.87□□□□□ -0.67
LMO3-204ENST00000354662 KIAA0556O60303 1618 aa10.87□□□□□ -0.67
LMO3-204ENST00000354662 HECW1Q76N89 1606 aa10.87□□□□□ -0.67
LMO3-204ENST00000354662 DDX10Q13206 875 aaKnown RBP10.86□□□□□ -0.67
LMO3-204ENST00000354662 CNGB1Q14028 1251 aaPredicted RBP10.86□□□□□ -0.67
LMO3-204ENST00000354662 MAP7D2Q96T17 732 aa10.86□□□□□ -0.67
LMO3-204ENST00000354662 LRRC9Q6ZRR7 1453 aa10.86□□□□□ -0.67
LMO3-204ENST00000354662 MS4A1P11836 297 aa10.86□□□□□ -0.67
LMO3-204ENST00000354662 MAPKBP1O60336 1514 aa10.85□□□□□ -0.67
LMO3-204ENST00000354662 TCERG1O14776 1098 aaKnown RBP10.85□□□□□ -0.67
LMO3-204ENST00000354662 FMN1Q68DA7 1419 aa10.85□□□□□ -0.67
LMO3-204ENST00000354662 FTSJ3Q8IY81 847 aaKnown RBP10.85□□□□□ -0.67
LMO3-204ENST00000354662 CCDC18Q5T9S5 1454 aa10.84□□□□□ -0.67
LMO3-204ENST00000354662 BACH2Q9BYV9 841 aa10.84□□□□□ -0.67
LMO3-204ENST00000354662 NUP160Q12769 1436 aa10.84□□□□□ -0.67
LMO3-204ENST00000354662 KIAA0586Q9BVV6 1533 aa10.84□□□□□ -0.67
LMO3-204ENST00000354662 EHBP1L1Q8N3D4 1523 aa10.83□□□□□ -0.68
LMO3-204ENST00000354662 TERF1P54274 439 aa10.83□□□□□ -0.68
LMO3-204ENST00000354662 ARID4BQ4LE39 1312 aaPredicted RBP10.83□□□□□ -0.68
LMO3-204ENST00000354662 GRIN2AQ12879 1464 aa10.82□□□□□ -0.68
LMO3-204ENST00000354662 CEP170Q5SW79 1584 aa10.82□□□□□ -0.68
LMO3-204ENST00000354662 ZBED9Q6R2W3 1325 aa10.82□□□□□ -0.68
LMO3-204ENST00000354662 SYNJ2O15056 1496 aa10.82□□□□□ -0.68
LMO3-204ENST00000354662 HNRNPUQ00839 825 aaKnown RBP eCLIP10.82□□□□□ -0.68
LMO3-204ENST00000354662 UBTFP17480 764 aaKnown RBP10.81□□□□□ -0.68
LMO3-204ENST00000354662 HOMEZQ8IX15 550 aa10.81□□□□□ -0.68
LMO3-204ENST00000354662 TMEM51Q9NW97 253 aa10.81□□□□□ -0.68
LMO3-204ENST00000354662 SUPT6HQ7KZ85 1726 aaKnown RBP10.81□□□□□ -0.68
LMO3-204ENST00000354662 SMG6Q86US8 1419 aaKnown RBP10.81□□□□□ -0.68
LMO3-204ENST00000354662 DNAJC5BQ9UF47 199 aa10.81□□□□□ -0.68
LMO3-204ENST00000354662 CHMP4AQ9BY43 222 aa10.8□□□□□ -0.68
LMO3-204ENST00000354662 DISP1Q96F81 1524 aa10.79□□□□□ -0.68
LMO3-204ENST00000354662 TCOF1Q13428 1488 aaKnown RBP10.79□□□□□ -0.68
LMO3-204ENST00000354662 EHMT2Q96KQ7 1210 aa10.79□□□□□ -0.68
LMO3-204ENST00000354662 BCCIPQ9P287 314 aaKnown RBP eCLIP10.79□□□□□ -0.68
LMO3-204ENST00000354662 PDE4AP27815 886 aa10.79□□□□□ -0.68
LMO3-204ENST00000354662 DMTNQ08495 405 aa10.79□□□□□ -0.68
LMO3-204ENST00000354662 ZNF608Q9ULD9 1512 aaPredicted RBP10.78□□□□□ -0.68
LMO3-204ENST00000354662 GCC2Q8IWJ2 1684 aa10.77□□□□□ -0.69
LMO3-204ENST00000354662 ZFP91Q96JP5 570 aaPredicted RBP10.77□□□□□ -0.69
LMO3-204ENST00000354662 RAPGEF6Q8TEU7 1601 aa10.77□□□□□ -0.69
LMO3-204ENST00000354662 FSD2A1L4K1 749 aa10.76□□□□□ -0.69
LMO3-204ENST00000354662 MTERF4Q7Z6M4 381 aaKnown RBP10.76□□□□□ -0.69
LMO3-204ENST00000354662 SAMD1Q6SPF0 538 aaPredicted RBP10.75□□□□□ -0.69
LMO3-204ENST00000354662 ABCA8O94911 1581 aa10.74□□□□□ -0.69
LMO3-204ENST00000354662 KIF20AO95235 890 aa10.74□□□□□ -0.69
LMO3-204ENST00000354662 ZNF830Q96NB3 372 aaPredicted RBP10.74□□□□□ -0.69
LMO3-204ENST00000354662 AKNAQ7Z591 1439 aa10.73□□□□□ -0.69
LMO3-204ENST00000354662 TDRD9Q8NDG6 1382 aaKnown RBP10.73□□□□□ -0.69
LMO3-204ENST00000354662 DHX37Q8IY37 1157 aaKnown RBP10.72□□□□□ -0.69
LMO3-204ENST00000354662 RNF216Q9NWF9 866 aaPredicted RBP10.72□□□□□ -0.69
LMO3-204ENST00000354662 CHD1O14646 1710 aa10.72□□□□□ -0.69
LMO3-204ENST00000354662 FRAT2O75474 233 aaPredicted RBP10.72□□□□□ -0.69
LMO3-204ENST00000354662 CROCC2H7BZ55 1655 aa10.72□□□□□ -0.69
LMO3-204ENST00000354662 MAGI3Q5TCQ9 1506 aa10.72□□□□□ -0.69
LMO3-204ENST00000354662 PPP4R3BQ5MIZ7 849 aa10.71□□□□□ -0.69
LMO3-204ENST00000354662 ITSN2Q9NZM3 1697 aa10.71□□□□□ -0.69
LMO3-204ENST00000354662 TAF3Q5VWG9 929 aa10.71□□□□□ -0.7
LMO3-204ENST00000354662 CLASP1Q7Z460 1538 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms