RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 IFT140Q96RY7 1462 aa27.24■■□□□ 1.95
COL13A1-201ENST00000354547 C11orf95C9JLR9 678 aaPredicted RBP27.24■■□□□ 1.95
COL13A1-201ENST00000354547 DISP1Q96F81 1524 aa27.23■■□□□ 1.95
COL13A1-201ENST00000354547 CNGB1Q14028 1251 aaPredicted RBP27.23■■□□□ 1.95
COL13A1-201ENST00000354547 KIAA0586Q9BVV6 1533 aa27.22■■□□□ 1.95
COL13A1-201ENST00000354547 NUP153P49790 1475 aaKnown RBP27.22■■□□□ 1.95
COL13A1-201ENST00000354547 NBPF8Q3BBV2 869 aa27.22■■□□□ 1.95
COL13A1-201ENST00000354547 ABCC5O15440 1437 aa27.21■■□□□ 1.95
COL13A1-201ENST00000354547 CFDP1Q9UEE9 299 aaPredicted RBP27.21■■□□□ 1.95
COL13A1-201ENST00000354547 AKNAQ7Z591 1439 aa27.2■■□□□ 1.94
COL13A1-201ENST00000354547 PRG4Q92954 1404 aaPredicted RBP27.2■■□□□ 1.94
COL13A1-201ENST00000354547 IRX6P78412 446 aaPredicted RBP27.19■■□□□ 1.94
COL13A1-201ENST00000354547 CCDC184Q52MB2 194 aa27.18■■□□□ 1.94
COL13A1-201ENST00000354547 KIAA0556O60303 1618 aa27.18■■□□□ 1.94
COL13A1-201ENST00000354547 ZNF326Q5BKZ1 582 aaKnown RBP27.18■■□□□ 1.94
COL13A1-201ENST00000354547 GRIN2AQ12879 1464 aa27.16■■□□□ 1.94
COL13A1-201ENST00000354547 ANKRD30BQ9BXX2 1392 aa27.14■■□□□ 1.94
COL13A1-201ENST00000354547 POLR3GLQ9BT43 218 aa27.14■■□□□ 1.94
COL13A1-201ENST00000354547 ERCC6Q03468 1493 aa27.12■■□□□ 1.93
COL13A1-201ENST00000354547 FAM9BQ8IZU0 186 aa27.12■■□□□ 1.93
COL13A1-201ENST00000354547 PLB1Q6P1J6 1458 aa27.12■■□□□ 1.93
COL13A1-201ENST00000354547 RAPGEF6Q8TEU7 1601 aa27.1■■□□□ 1.93
COL13A1-201ENST00000354547 ROCK1Q13464 1354 aa27.1■■□□□ 1.93
COL13A1-201ENST00000354547 EIF4G3O43432 1585 aaKnown RBP27.08■■□□□ 1.93
COL13A1-201ENST00000354547 CCDC7Q96M83 1385 aa27.06■■□□□ 1.92
COL13A1-201ENST00000354547 DNMT1P26358 1616 aaKnown RBP27.06■■□□□ 1.92
COL13A1-201ENST00000354547 MYT1Q01538 1121 aa27.06■■□□□ 1.92
COL13A1-201ENST00000354547 RPRD2Q5VT52 1461 aaKnown RBP27.05■■□□□ 1.92
COL13A1-201ENST00000354547 JPH4Q96JJ6 628 aa27.05■■□□□ 1.92
COL13A1-201ENST00000354547 CNTLNQ9NXG0 1405 aa27.05■■□□□ 1.92
COL13A1-201ENST00000354547 MRS2Q9HD23 443 aa27.04■■□□□ 1.92
COL13A1-201ENST00000354547 TROQ12816 1431 aaPredicted RBP27.03■■□□□ 1.92
COL13A1-201ENST00000354547 PRKRIP1Q9H875 184 aaPredicted RBP27.03■■□□□ 1.92
COL13A1-201ENST00000354547 PKD2Q13563 968 aa27.01■■□□□ 1.91
COL13A1-201ENST00000354547 CAMSAP2Q08AD1 1489 aa27.01■■□□□ 1.91
COL13A1-201ENST00000354547 KIF7Q2M1P5 1343 aa27■■□□□ 1.91
COL13A1-201ENST00000354547 NCOA1Q15788 1441 aa26.99■■□□□ 1.91
COL13A1-201ENST00000354547 TEX14Q8IWB6 1497 aa26.98■■□□□ 1.91
COL13A1-201ENST00000354547 GPATCH8Q9UKJ3 1502 aaKnown RBP26.97■■□□□ 1.91
COL13A1-201ENST00000354547 PLEKHD1A6NEE1 506 aa26.96■■□□□ 1.91
COL13A1-201ENST00000354547 KIF14Q15058 1648 aa26.96■■□□□ 1.91
COL13A1-201ENST00000354547 CEP170Q5SW79 1584 aa26.96■■□□□ 1.91
COL13A1-201ENST00000354547 PZPP20742 1482 aa26.94■■□□□ 1.9
COL13A1-201ENST00000354547 SENP3-EIF4A1A0A087X0R7 540 aa26.93■■□□□ 1.9
COL13A1-201ENST00000354547 CARMIL2Q6F5E8 1435 aa26.92■■□□□ 1.9
COL13A1-201ENST00000354547 SYNJ2O15056 1496 aa26.91■■□□□ 1.9
COL13A1-201ENST00000354547 RBM19Q9Y4C8 960 aaKnown RBP26.9■■□□□ 1.9
COL13A1-201ENST00000354547 MAGI1Q96QZ7 1491 aaPredicted RBP26.9■■□□□ 1.9
COL13A1-201ENST00000354547 KDM2AQ9Y2K7 1162 aa26.89■■□□□ 1.9
COL13A1-201ENST00000354547 ANKRD30AQ9BXX3 1397 aa26.89■■□□□ 1.89
COL13A1-201ENST00000354547 HNRNPMP52272 730 aaKnown RBP eCLIP26.87■■□□□ 1.89
COL13A1-201ENST00000354547 NUP155O75694 1391 aa26.86■■□□□ 1.89
COL13A1-201ENST00000354547 SPATA31E1Q6ZUB1 1445 aa26.85■■□□□ 1.89
COL13A1-201ENST00000354547 ANKRD50Q9ULJ7 1429 aa26.85■■□□□ 1.89
COL13A1-201ENST00000354547 KIAA1107Q9UPP5 1409 aa26.84■■□□□ 1.89
COL13A1-201ENST00000354547 TSPY4P0CV99 314 aa26.84■■□□□ 1.89
COL13A1-201ENST00000354547 TSPY10P0CW01 314 aa26.84■■□□□ 1.89
COL13A1-201ENST00000354547 USP47Q96K76 1375 aa26.82■■□□□ 1.88
COL13A1-201ENST00000354547 ITSN2Q9NZM3 1697 aa26.8■■□□□ 1.88
COL13A1-201ENST00000354547 ATP10BO94823 1461 aa26.76■■□□□ 1.87
COL13A1-201ENST00000354547 CARD11Q9BXL7 1154 aa26.76■■□□□ 1.87
COL13A1-201ENST00000354547 NUP160Q12769 1436 aa26.75■■□□□ 1.87
COL13A1-201ENST00000354547 C9orf84Q5VXU9 1444 aa26.75■■□□□ 1.87
COL13A1-201ENST00000354547 ANP32EQ9BTT0 268 aa26.74■■□□□ 1.87
COL13A1-201ENST00000354547 ADGBQ8N7X0 1667 aa26.74■■□□□ 1.87
COL13A1-201ENST00000354547 DCAF11Q8TEB1 546 aa26.74■■□□□ 1.87
COL13A1-201ENST00000354547 ADGRL2O95490 1459 aa26.72■■□□□ 1.87
COL13A1-201ENST00000354547 ZBED9Q6R2W3 1325 aa26.71■■□□□ 1.87
COL13A1-201ENST00000354547 B4GALNT3Q6L9W6 998 aa26.69■■□□□ 1.86
COL13A1-201ENST00000354547 KIF15Q9NS87 1388 aa26.68■■□□□ 1.86
COL13A1-201ENST00000354547 ADCY10Q96PN6 1610 aa26.68■■□□□ 1.86
COL13A1-201ENST00000354547 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.68■■□□□ 1.86
COL13A1-201ENST00000354547 ST20-MTHFSA0A0A6YYL1 179 aa26.67■■□□□ 1.86
COL13A1-201ENST00000354547 MBD5Q9P267 1494 aa26.67■■□□□ 1.86
COL13A1-201ENST00000354547 RGL3Q3MIN7 710 aa26.66■■□□□ 1.86
COL13A1-201ENST00000354547 CROCC2H7BZ55 1655 aa26.66■■□□□ 1.86
COL13A1-201ENST00000354547 CDC42BPAQ5VT25 1732 aa26.66■■□□□ 1.86
COL13A1-201ENST00000354547 DHX29Q7Z478 1369 aaKnown RBP26.66■■□□□ 1.86
COL13A1-201ENST00000354547 BCORL1Q5H9F3 1711 aa26.66■■□□□ 1.86
COL13A1-201ENST00000354547 ABCC10Q5T3U5 1492 aa26.65■■□□□ 1.86
COL13A1-201ENST00000354547 PTPRGP23470 1445 aa26.65■■□□□ 1.86
COL13A1-201ENST00000354547 PPP4R2Q9NY27 417 aa26.65■■□□□ 1.86
COL13A1-201ENST00000354547 ABCA8O94911 1581 aa26.63■■□□□ 1.85
COL13A1-201ENST00000354547 TMC1Q8TDI8 760 aa26.61■■□□□ 1.85
COL13A1-201ENST00000354547 POLR1AO95602 1720 aaPredicted RBP26.56■■□□□ 1.84
COL13A1-201ENST00000354547 KDM5CP41229 1560 aa26.55■■□□□ 1.84
COL13A1-201ENST00000354547 ROCK2O75116 1388 aaKnown RBP26.53■■□□□ 1.84
COL13A1-201ENST00000354547 SHANK2Q9UPX8 1470 aa26.52■■□□□ 1.84
COL13A1-201ENST00000354547 SALL2Q9Y467 1007 aaPredicted RBP26.52■■□□□ 1.84
COL13A1-201ENST00000354547 RALGAPBQ86X10 1494 aa26.51■■□□□ 1.83
COL13A1-201ENST00000354547 ERICH6BQ5W0A0 696 aa26.5■■□□□ 1.83
COL13A1-201ENST00000354547 MSH5O43196 834 aa26.49■■□□□ 1.83
COL13A1-201ENST00000354547 UHRF1BP1Q6BDS2 1440 aa26.49■■□□□ 1.83
COL13A1-201ENST00000354547 NBPF1Q3BBV0 1214 aa26.49■■□□□ 1.83
COL13A1-201ENST00000354547 PNISRQ8TF01 805 aaKnown RBP26.49■■□□□ 1.83
COL13A1-201ENST00000354547 ARID4BQ4LE39 1312 aaPredicted RBP26.47■■□□□ 1.83
COL13A1-201ENST00000354547 CCDC141Q6ZP82 1450 aa26.46■■□□□ 1.83
COL13A1-201ENST00000354547 NUDCQ9Y266 331 aa26.46■■□□□ 1.83
COL13A1-201ENST00000354547 SAMD9LQ8IVG5 1584 aa26.44■■□□□ 1.82
COL13A1-201ENST00000354547 CCDC144AA2RUR9 1427 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms