RNA–Protein interactions for RNA: ENST00000354042.8

SLC13A4-201, Transcript of solute carrier family 13 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A4, Length 2,897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A4-201ENST00000354042 HFM1A2PYH4 1435 aa17.91■□□□□ 0.46
SLC13A4-201ENST00000354042 WASHC2AQ641Q2 1341 aa17.91■□□□□ 0.46
SLC13A4-201ENST00000354042 EHBP1L1Q8N3D4 1523 aa17.9■□□□□ 0.46
SLC13A4-201ENST00000354042 HSPA5P11021 654 aaKnown RBP17.9■□□□□ 0.46
SLC13A4-201ENST00000354042 PTPN23Q9H3S7 1636 aa17.89■□□□□ 0.45
SLC13A4-201ENST00000354042 CNGB1Q14028 1251 aaPredicted RBP17.89■□□□□ 0.45
SLC13A4-201ENST00000354042 NAIPQ13075 1403 aa17.88■□□□□ 0.45
SLC13A4-201ENST00000354042 MYOM3Q5VTT5 1437 aa17.87■□□□□ 0.45
SLC13A4-201ENST00000354042 KDM5BQ9UGL1 1544 aa17.86■□□□□ 0.45
SLC13A4-201ENST00000354042 RRP7BPQ9NSQ0 103 aa17.86■□□□□ 0.45
SLC13A4-201ENST00000354042 CHIC2Q9UKJ5 165 aa17.85■□□□□ 0.45
SLC13A4-201ENST00000354042 JPH4Q96JJ6 628 aa17.84■□□□□ 0.45
SLC13A4-201ENST00000354042 MRS2Q9HD23 443 aa17.84■□□□□ 0.45
SLC13A4-201ENST00000354042 NUP153P49790 1475 aaKnown RBP17.83■□□□□ 0.45
SLC13A4-201ENST00000354042 NUP160Q12769 1436 aa17.83■□□□□ 0.45
SLC13A4-201ENST00000354042 RAPGEF6Q8TEU7 1601 aa17.83■□□□□ 0.44
SLC13A4-201ENST00000354042 SENP3-EIF4A1A0A087X0R7 540 aa17.82■□□□□ 0.44
SLC13A4-201ENST00000354042 PLB1Q6P1J6 1458 aa17.82■□□□□ 0.44
SLC13A4-201ENST00000354042 ARHGEF11O15085 1522 aa17.82■□□□□ 0.44
SLC13A4-201ENST00000354042 PAK3O75914 559 aaPredicted RBP17.81■□□□□ 0.44
SLC13A4-201ENST00000354042 NOP58Q9Y2X3 529 aaKnown RBP17.8■□□□□ 0.44
SLC13A4-201ENST00000354042 EIF4G2P78344 907 aaKnown RBP eCLIP17.79■□□□□ 0.44
SLC13A4-201ENST00000354042 C11orf95C9JLR9 678 aaPredicted RBP17.79■□□□□ 0.44
SLC13A4-201ENST00000354042 ERICH6BQ5W0A0 696 aa17.79■□□□□ 0.44
SLC13A4-201ENST00000354042 CHD1O14646 1710 aa17.78■□□□□ 0.44
SLC13A4-201ENST00000354042 FOXD1Q16676 465 aa17.77■□□□□ 0.44
SLC13A4-201ENST00000354042 PRKRIP1Q9H875 184 aaPredicted RBP17.77■□□□□ 0.43
SLC13A4-201ENST00000354042 MYT1LQ9UL68 1186 aa17.75■□□□□ 0.43
SLC13A4-201ENST00000354042 CARMIL2Q6F5E8 1435 aa17.74■□□□□ 0.43
SLC13A4-201ENST00000354042 DENND4BO75064 1496 aaPredicted RBP17.74■□□□□ 0.43
SLC13A4-201ENST00000354042 CNTLNQ9NXG0 1405 aa17.74■□□□□ 0.43
SLC13A4-201ENST00000354042 L3MBTL2Q969R5 705 aa17.73■□□□□ 0.43
SLC13A4-201ENST00000354042 PRG4Q92954 1404 aaPredicted RBP17.73■□□□□ 0.43
SLC13A4-201ENST00000354042 ZBED9Q6R2W3 1325 aa17.72■□□□□ 0.43
SLC13A4-201ENST00000354042 ZNF644Q9H582 1327 aaPredicted RBP17.71■□□□□ 0.42
SLC13A4-201ENST00000354042 POLR3GLQ9BT43 218 aa17.7■□□□□ 0.42
SLC13A4-201ENST00000354042 MPHOSPH9Q99550 1183 aa17.69■□□□□ 0.42
SLC13A4-201ENST00000354042 KDM6BO15054 1643 aa17.69■□□□□ 0.42
SLC13A4-201ENST00000354042 TCOF1Q13428 1488 aaKnown RBP17.69■□□□□ 0.42
SLC13A4-201ENST00000354042 CCDC7Q96M83 1385 aa17.68■□□□□ 0.42
SLC13A4-201ENST00000354042 AKNAQ7Z591 1439 aa17.68■□□□□ 0.42
SLC13A4-201ENST00000354042 KIF14Q15058 1648 aa17.67■□□□□ 0.42
SLC13A4-201ENST00000354042 CCDC136Q96JN2 1154 aa17.67■□□□□ 0.42
SLC13A4-201ENST00000354042 ANP32AP39687 249 aaKnown RBP17.65■□□□□ 0.42
SLC13A4-201ENST00000354042 NBPF8Q3BBV2 869 aa17.65■□□□□ 0.42
SLC13A4-201ENST00000354042 NCOA1Q15788 1441 aa17.65■□□□□ 0.42
SLC13A4-201ENST00000354042 TROQ12816 1431 aaPredicted RBP17.64■□□□□ 0.41
SLC13A4-201ENST00000354042 MIA2Q96PC5 1412 aa17.64■□□□□ 0.41
SLC13A4-201ENST00000354042 RTL5Q5HYW3 569 aaPredicted RBP17.64■□□□□ 0.41
SLC13A4-201ENST00000354042 ABCA8O94911 1581 aa17.63■□□□□ 0.41
SLC13A4-201ENST00000354042 ZNF777Q9ULD5 760 aaPredicted RBP17.62■□□□□ 0.41
SLC13A4-201ENST00000354042 KIF7Q2M1P5 1343 aa17.61■□□□□ 0.41
SLC13A4-201ENST00000354042 ZBTB47Q9UFB7 747 aaPredicted RBP17.61■□□□□ 0.41
SLC13A4-201ENST00000354042 ERCC6L2Q5T890 1561 aa17.61■□□□□ 0.41
SLC13A4-201ENST00000354042 NPM2Q86SE8 214 aaKnown RBP17.61■□□□□ 0.41
SLC13A4-201ENST00000354042 IPO9Q96P70 1041 aaKnown RBP17.6■□□□□ 0.41
SLC13A4-201ENST00000354042 ATP10BO94823 1461 aa17.6■□□□□ 0.41
SLC13A4-201ENST00000354042 GCC2Q8IWJ2 1684 aa17.59■□□□□ 0.41
SLC13A4-201ENST00000354042 PTPRGP23470 1445 aa17.59■□□□□ 0.41
SLC13A4-201ENST00000354042 PRKCSHP14314 528 aaPredicted RBP17.58■□□□□ 0.4
SLC13A4-201ENST00000354042 DAPK1P53355 1430 aa17.58■□□□□ 0.4
SLC13A4-201ENST00000354042 ANO8Q9HCE9 1232 aaPredicted RBP17.58■□□□□ 0.4
SLC13A4-201ENST00000354042 CFDP1Q9UEE9 299 aaPredicted RBP17.58■□□□□ 0.4
SLC13A4-201ENST00000354042 ABCC5O15440 1437 aa17.56■□□□□ 0.4
SLC13A4-201ENST00000354042 GPATCH8Q9UKJ3 1502 aaKnown RBP17.56■□□□□ 0.4
SLC13A4-201ENST00000354042 PLEKHD1A6NEE1 506 aa17.56■□□□□ 0.4
SLC13A4-201ENST00000354042 RTN4Q9NQC3 1192 aaKnown RBP17.56■□□□□ 0.4
SLC13A4-201ENST00000354042 NUDCQ9Y266 331 aa17.56■□□□□ 0.4
SLC13A4-201ENST00000354042 DNMT1P26358 1616 aaKnown RBP17.55■□□□□ 0.4
SLC13A4-201ENST00000354042 ZNF326Q5BKZ1 582 aaKnown RBP17.55■□□□□ 0.4
SLC13A4-201ENST00000354042 ADCY10Q96PN6 1610 aa17.55■□□□□ 0.4
SLC13A4-201ENST00000354042 CAMSAP2Q08AD1 1489 aa17.55■□□□□ 0.4
SLC13A4-201ENST00000354042 ANKRD30BQ9BXX2 1392 aa17.53■□□□□ 0.4
SLC13A4-201ENST00000354042 ITSN2Q9NZM3 1697 aa17.53■□□□□ 0.4
SLC13A4-201ENST00000354042 SHROOM2Q13796 1616 aa17.53■□□□□ 0.4
SLC13A4-201ENST00000354042 SLC4A1APQ9BWU0 796 aaKnown RBP17.52■□□□□ 0.4
SLC13A4-201ENST00000354042 CDC42BPAQ5VT25 1732 aa17.52■□□□□ 0.4
SLC13A4-201ENST00000354042 SMG6Q86US8 1419 aaKnown RBP17.52■□□□□ 0.39
SLC13A4-201ENST00000354042 IL27Q8NEV9 243 aa17.52■□□□□ 0.39
SLC13A4-201ENST00000354042 RPRD2Q5VT52 1461 aaKnown RBP17.52■□□□□ 0.39
SLC13A4-201ENST00000354042 SPATA31E1Q6ZUB1 1445 aa17.51■□□□□ 0.39
SLC13A4-201ENST00000354042 LAS1LQ9Y4W2 734 aaKnown RBP17.51■□□□□ 0.39
SLC13A4-201ENST00000354042 TEX14Q8IWB6 1497 aa17.5■□□□□ 0.39
SLC13A4-201ENST00000354042 SALL2Q9Y467 1007 aaPredicted RBP17.49■□□□□ 0.39
SLC13A4-201ENST00000354042 ABCC10Q5T3U5 1492 aa17.47■□□□□ 0.39
SLC13A4-201ENST00000354042 DHX29Q7Z478 1369 aaKnown RBP17.45■□□□□ 0.38
SLC13A4-201ENST00000354042 TMC1Q8TDI8 760 aa17.44■□□□□ 0.38
SLC13A4-201ENST00000354042 ROCK1Q13464 1354 aa17.44■□□□□ 0.38
SLC13A4-201ENST00000354042 CLASP1Q7Z460 1538 aa17.43■□□□□ 0.38
SLC13A4-201ENST00000354042 CROCC2H7BZ55 1655 aa17.43■□□□□ 0.38
SLC13A4-201ENST00000354042 NEFMP07197 916 aa17.42■□□□□ 0.38
SLC13A4-201ENST00000354042 RNF123Q5XPI4 1314 aa17.42■□□□□ 0.38
SLC13A4-201ENST00000354042 EXOC6Q8TAG9 804 aa17.42■□□□□ 0.38
SLC13A4-201ENST00000354042 ADGBQ8N7X0 1667 aa17.41■□□□□ 0.38
SLC13A4-201ENST00000354042 HNRNPMP52272 730 aaKnown RBP eCLIP17.41■□□□□ 0.38
SLC13A4-201ENST00000354042 POLR1AO95602 1720 aaPredicted RBP17.4■□□□□ 0.38
SLC13A4-201ENST00000354042 USP47Q96K76 1375 aa17.4■□□□□ 0.38
SLC13A4-201ENST00000354042 CDC42BPBQ9Y5S2 1711 aa17.39■□□□□ 0.37
SLC13A4-201ENST00000354042 PNISRQ8TF01 805 aaKnown RBP17.38■□□□□ 0.37
SLC13A4-201ENST00000354042 ABCC2Q92887 1545 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms