RNA–Protein interactions for RNA: ENST00000353278.8

SLC6A20-201, Transcript of solute carrier family 6 member 20, humanhuman

TSL 1 (best) BASIC

Gene SLC6A20, Length 5,247 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-201ENST00000353278 NUP155O75694 1391 aa14.51□□□□□ -0.09
SLC6A20-201ENST00000353278 MROH2BQ7Z745 1585 aa14.51□□□□□ -0.09
SLC6A20-201ENST00000353278 GOLGA6L22H0YM25 854 aa14.5□□□□□ -0.09
SLC6A20-201ENST00000353278 FGD1P98174 961 aa14.49□□□□□ -0.09
SLC6A20-201ENST00000353278 KCNJ4P48050 445 aa14.47□□□□□ -0.09
SLC6A20-201ENST00000353278 DDRGK1Q96HY6 314 aa14.46□□□□□ -0.09
SLC6A20-201ENST00000353278 CHMP4AQ9BY43 222 aa14.46□□□□□ -0.09
SLC6A20-201ENST00000353278 TMX4Q9H1E5 349 aaPredicted RBP14.46□□□□□ -0.09
SLC6A20-201ENST00000353278 VPS8Q8N3P4 1428 aa14.45□□□□□ -0.1
SLC6A20-201ENST00000353278 HNRNPMP52272 730 aaKnown RBP eCLIP14.45□□□□□ -0.1
SLC6A20-201ENST00000353278 AEBP2Q6ZN18 517 aaPredicted RBP14.45□□□□□ -0.1
SLC6A20-201ENST00000353278 NGDNQ8NEJ9 315 aaKnown RBP14.45□□□□□ -0.1
SLC6A20-201ENST00000353278 SETD5Q9C0A6 1442 aa14.44□□□□□ -0.1
SLC6A20-201ENST00000353278 TULP1O00294 542 aaPredicted RBP14.44□□□□□ -0.1
SLC6A20-201ENST00000353278 ZNF330Q9Y3S2 320 aaPredicted RBP14.43□□□□□ -0.1
SLC6A20-201ENST00000353278 CALD1Q05682 793 aaKnown RBP14.43□□□□□ -0.1
SLC6A20-201ENST00000353278 TERF2IPQ9NYB0 399 aa14.42□□□□□ -0.1
SLC6A20-201ENST00000353278 EIF3AQ14152 1382 aaKnown RBP14.42□□□□□ -0.1
SLC6A20-201ENST00000353278 ANP32EQ9BTT0 268 aa14.41□□□□□ -0.1
SLC6A20-201ENST00000353278 CCDC18Q5T9S5 1454 aa14.4□□□□□ -0.1
SLC6A20-201ENST00000353278 PTPRGP23470 1445 aa14.4□□□□□ -0.1
SLC6A20-201ENST00000353278 RAPGEF2Q9Y4G8 1499 aa14.4□□□□□ -0.1
SLC6A20-201ENST00000353278 ROCK2O75116 1388 aaKnown RBP14.4□□□□□ -0.1
SLC6A20-201ENST00000353278 MPHOSPH9Q99550 1183 aa14.4□□□□□ -0.1
SLC6A20-201ENST00000353278 U2AF1L5P0DN76 240 aaPredicted RBP14.39□□□□□ -0.11
SLC6A20-201ENST00000353278 U2AF1Q01081 240 aaKnown RBP eCLIP14.39□□□□□ -0.11
SLC6A20-201ENST00000353278 FOXD1Q16676 465 aa14.39□□□□□ -0.11
SLC6A20-201ENST00000353278 TAOK2Q9UL54 1235 aa14.39□□□□□ -0.11
SLC6A20-201ENST00000353278 NAP1L2Q9ULW6 460 aaPredicted RBP14.39□□□□□ -0.11
SLC6A20-201ENST00000353278 ABCC8Q09428 1581 aa14.38□□□□□ -0.11
SLC6A20-201ENST00000353278 ISY1Q9ULR0 285 aaKnown RBP14.38□□□□□ -0.11
SLC6A20-201ENST00000353278 KTN1Q86UP2 1357 aaKnown RBP14.37□□□□□ -0.11
SLC6A20-201ENST00000353278 KANK4Q5T7N3 995 aaPredicted RBP14.37□□□□□ -0.11
SLC6A20-201ENST00000353278 ATAD2BQ9ULI0 1458 aa14.37□□□□□ -0.11
SLC6A20-201ENST00000353278 RGS3P49796 1198 aa14.36□□□□□ -0.11
SLC6A20-201ENST00000353278 NBR1Q14596 966 aa14.36□□□□□ -0.11
SLC6A20-201ENST00000353278 IPO8O15397 1037 aaKnown RBP14.36□□□□□ -0.11
SLC6A20-201ENST00000353278 TOP2AP11388 1531 aaKnown RBP14.36□□□□□ -0.11
SLC6A20-201ENST00000353278 SUPT16HQ9Y5B9 1047 aaKnown RBP14.35□□□□□ -0.11
SLC6A20-201ENST00000353278 FANCD2Q9BXW9 1451 aa14.35□□□□□ -0.11
SLC6A20-201ENST00000353278 FHOD3Q2V2M9 1422 aa14.35□□□□□ -0.11
SLC6A20-201ENST00000353278 HSPA5P11021 654 aaKnown RBP14.35□□□□□ -0.11
SLC6A20-201ENST00000353278 AMPHP49418 695 aa14.35□□□□□ -0.11
SLC6A20-201ENST00000353278 NUTM2DQ5VT03 806 aaPredicted RBP14.35□□□□□ -0.11
SLC6A20-201ENST00000353278 STK31Q9BXU1 1019 aa14.33□□□□□ -0.12
SLC6A20-201ENST00000353278 HDAC5Q9UQL6 1122 aa14.33□□□□□ -0.12
SLC6A20-201ENST00000353278 NUTM2FA1L443 756 aa14.32□□□□□ -0.12
SLC6A20-201ENST00000353278 FAM69CQ0P6D2 419 aa14.31□□□□□ -0.12
SLC6A20-201ENST00000353278 CFAP44Q96MT7 982 aa14.31□□□□□ -0.12
SLC6A20-201ENST00000353278 MCCP23508 829 aa14.3□□□□□ -0.12
SLC6A20-201ENST00000353278 TPRNQ4KMQ1 711 aa14.3□□□□□ -0.12
SLC6A20-201ENST00000353278 VGFO15240 615 aaPredicted RBP14.3□□□□□ -0.12
SLC6A20-201ENST00000353278 GTF2E1P29083 439 aaPredicted RBP14.29□□□□□ -0.12
SLC6A20-201ENST00000353278 TAF7LQ5H9L4 462 aa14.29□□□□□ -0.12
SLC6A20-201ENST00000353278 G3V3G9 751 aa14.28□□□□□ -0.12
SLC6A20-201ENST00000353278 DCAF8Q5TAQ9 597 aa14.28□□□□□ -0.12
SLC6A20-201ENST00000353278 TRIM44Q96DX7 344 aaPredicted RBP14.28□□□□□ -0.12
SLC6A20-201ENST00000353278 LTV1Q96GA3 475 aaPredicted RBP14.28□□□□□ -0.12
SLC6A20-201ENST00000353278 RALBP1Q15311 655 aa14.28□□□□□ -0.12
SLC6A20-201ENST00000353278 GORABQ5T7V8 394 aa14.27□□□□□ -0.12
SLC6A20-201ENST00000353278 TRAK1Q9UPV9 953 aa14.27□□□□□ -0.13
SLC6A20-201ENST00000353278 PTMAP06454 111 aaKnown RBP14.27□□□□□ -0.13
SLC6A20-201ENST00000353278 LMOD3Q0VAK6 560 aa14.27□□□□□ -0.13
SLC6A20-201ENST00000353278 PPP4R2Q9NY27 417 aa14.27□□□□□ -0.13
SLC6A20-201ENST00000353278 HSP90AB1P08238 724 aaKnown RBP14.26□□□□□ -0.13
SLC6A20-201ENST00000353278 UACAQ9BZF9 1416 aa14.26□□□□□ -0.13
SLC6A20-201ENST00000353278 EVA1CP58658 441 aa14.26□□□□□ -0.13
SLC6A20-201ENST00000353278 RAB3GAP2Q9H2M9 1393 aa14.25□□□□□ -0.13
SLC6A20-201ENST00000353278 GOLGA6L4A6NEF3 574 aa14.25□□□□□ -0.13
SLC6A20-201ENST00000353278 KIAA1211Q6ZU35 1233 aa14.25□□□□□ -0.13
SLC6A20-201ENST00000353278 CHMP3Q9Y3E7 222 aa14.25□□□□□ -0.13
SLC6A20-201ENST00000353278 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.24□□□□□ -0.13
SLC6A20-201ENST00000353278 APBB1O00213 710 aa14.23□□□□□ -0.13
SLC6A20-201ENST00000353278 CCDC144AA2RUR9 1427 aa14.22□□□□□ -0.13
SLC6A20-201ENST00000353278 CLSTN1O94985 981 aa14.22□□□□□ -0.13
SLC6A20-201ENST00000353278 WIZO95785 1651 aa14.22□□□□□ -0.13
SLC6A20-201ENST00000353278 MEX3CQ5U5Q3 659 aaKnown RBP14.21□□□□□ -0.13
SLC6A20-201ENST00000353278 CCER2I3L3R5 266 aa14.21□□□□□ -0.13
SLC6A20-201ENST00000353278 L3MBTL2Q969R5 705 aa14.21□□□□□ -0.14
SLC6A20-201ENST00000353278 GNL2Q13823 731 aaKnown RBP14.2□□□□□ -0.14
SLC6A20-201ENST00000353278 GOLGA6L6A8MZA4 724 aa14.2□□□□□ -0.14
SLC6A20-201ENST00000353278 NRDCO43847 1150 aa14.2□□□□□ -0.14
SLC6A20-201ENST00000353278 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.19□□□□□ -0.14
SLC6A20-201ENST00000353278 COG3Q96JB2 828 aa14.19□□□□□ -0.14
SLC6A20-201ENST00000353278 ITPRIPQ8IWB1 547 aa14.19□□□□□ -0.14
SLC6A20-201ENST00000353278 GAPVD1Q14C86 1478 aa14.19□□□□□ -0.14
SLC6A20-201ENST00000353278 HMMRO75330 724 aa14.18□□□□□ -0.14
SLC6A20-201ENST00000353278 GPATCH3Q96I76 525 aa14.18□□□□□ -0.14
SLC6A20-201ENST00000353278 C1orf141Q5JVX7 400 aa14.18□□□□□ -0.14
SLC6A20-201ENST00000353278 HSCBQ8IWL3 235 aa14.18□□□□□ -0.14
SLC6A20-201ENST00000353278 EVC2Q86UK5 1308 aa14.18□□□□□ -0.14
SLC6A20-201ENST00000353278 FRAT2O75474 233 aaPredicted RBP14.18□□□□□ -0.14
SLC6A20-201ENST00000353278 MSH5O43196 834 aa14.18□□□□□ -0.14
SLC6A20-201ENST00000353278 PLCB2Q00722 1185 aa14.18□□□□□ -0.14
SLC6A20-201ENST00000353278 SMARCA4P51532 1647 aa14.17□□□□□ -0.14
SLC6A20-201ENST00000353278 RWDD1Q9H446 243 aaPredicted RBP14.16□□□□□ -0.14
SLC6A20-201ENST00000353278 SMC4Q9NTJ3 1288 aa14.16□□□□□ -0.14
SLC6A20-201ENST00000353278 ATF3P18847 181 aa14.15□□□□□ -0.14
SLC6A20-201ENST00000353278 PSME1Q06323 249 aa14.15□□□□□ -0.14
SLC6A20-201ENST00000353278 SLC4A10Q6U841 1118 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms