RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 MIA2Q96PC5 1412 aa20.54■□□□□ 0.88
TRAF3-202ENST00000351691 GCC2Q8IWJ2 1684 aa20.53■□□□□ 0.88
TRAF3-202ENST00000351691 TONSLQ96HA7 1378 aa20.52■□□□□ 0.87
TRAF3-202ENST00000351691 CHMP7Q8WUX9 453 aaPredicted RBP20.51■□□□□ 0.87
TRAF3-202ENST00000351691 HIRIP3Q9BW71 556 aaPredicted RBP20.49■□□□□ 0.87
TRAF3-202ENST00000351691 KIAA0586Q9BVV6 1533 aa20.49■□□□□ 0.87
TRAF3-202ENST00000351691 IRX6P78412 446 aaPredicted RBP20.47■□□□□ 0.87
TRAF3-202ENST00000351691 KIAA0556O60303 1618 aa20.44■□□□□ 0.86
TRAF3-202ENST00000351691 KDM5BQ9UGL1 1544 aa20.42■□□□□ 0.86
TRAF3-202ENST00000351691 CDK13Q14004 1512 aaKnown RBP20.42■□□□□ 0.86
TRAF3-202ENST00000351691 ZBED9Q6R2W3 1325 aa20.4■□□□□ 0.86
TRAF3-202ENST00000351691 NUP160Q12769 1436 aa20.4■□□□□ 0.86
TRAF3-202ENST00000351691 DISP1Q96F81 1524 aa20.4■□□□□ 0.86
TRAF3-202ENST00000351691 CNTLNQ9NXG0 1405 aa20.37■□□□□ 0.85
TRAF3-202ENST00000351691 RAPGEF6Q8TEU7 1601 aa20.37■□□□□ 0.85
TRAF3-202ENST00000351691 ROCK1Q13464 1354 aa20.37■□□□□ 0.85
TRAF3-202ENST00000351691 PAK3O75914 559 aaPredicted RBP20.34■□□□□ 0.85
TRAF3-202ENST00000351691 B4GALNT3Q6L9W6 998 aa20.34■□□□□ 0.85
TRAF3-202ENST00000351691 IPO9Q96P70 1041 aaKnown RBP20.34■□□□□ 0.85
TRAF3-202ENST00000351691 DNMT1P26358 1616 aaKnown RBP20.33■□□□□ 0.84
TRAF3-202ENST00000351691 RRP7BPQ9NSQ0 103 aa20.33■□□□□ 0.84
TRAF3-202ENST00000351691 WASHC2AQ641Q2 1341 aa20.33■□□□□ 0.84
TRAF3-202ENST00000351691 NUP153P49790 1475 aaKnown RBP20.32■□□□□ 0.84
TRAF3-202ENST00000351691 RTL5Q5HYW3 569 aaPredicted RBP20.31■□□□□ 0.84
TRAF3-202ENST00000351691 ANP32AP39687 249 aaKnown RBP20.31■□□□□ 0.84
TRAF3-202ENST00000351691 NBR1Q14596 966 aa20.31■□□□□ 0.84
TRAF3-202ENST00000351691 DENND4BO75064 1496 aaPredicted RBP20.3■□□□□ 0.84
TRAF3-202ENST00000351691 DAPK1P53355 1430 aa20.3■□□□□ 0.84
TRAF3-202ENST00000351691 KDM6BO15054 1643 aa20.29■□□□□ 0.84
TRAF3-202ENST00000351691 ANO8Q9HCE9 1232 aaPredicted RBP20.29■□□□□ 0.84
TRAF3-202ENST00000351691 CHIC2Q9UKJ5 165 aa20.28■□□□□ 0.84
TRAF3-202ENST00000351691 SMG6Q86US8 1419 aaKnown RBP20.27■□□□□ 0.84
TRAF3-202ENST00000351691 RNF123Q5XPI4 1314 aa20.26■□□□□ 0.83
TRAF3-202ENST00000351691 ABCC5O15440 1437 aa20.25■□□□□ 0.83
TRAF3-202ENST00000351691 HSPA5P11021 654 aaKnown RBP20.25■□□□□ 0.83
TRAF3-202ENST00000351691 MPHOSPH9Q99550 1183 aa20.25■□□□□ 0.83
TRAF3-202ENST00000351691 ZBTB47Q9UFB7 747 aaPredicted RBP20.25■□□□□ 0.83
TRAF3-202ENST00000351691 ITSN2Q9NZM3 1697 aa20.25■□□□□ 0.83
TRAF3-202ENST00000351691 TROQ12816 1431 aaPredicted RBP20.25■□□□□ 0.83
TRAF3-202ENST00000351691 ADCY10Q96PN6 1610 aa20.24■□□□□ 0.83
TRAF3-202ENST00000351691 PRKRIP1Q9H875 184 aaPredicted RBP20.24■□□□□ 0.83
TRAF3-202ENST00000351691 NCOA1Q15788 1441 aa20.23■□□□□ 0.83
TRAF3-202ENST00000351691 JPH4Q96JJ6 628 aa20.23■□□□□ 0.83
TRAF3-202ENST00000351691 POLR1AO95602 1720 aaPredicted RBP20.22■□□□□ 0.83
TRAF3-202ENST00000351691 EIF4G2P78344 907 aaKnown RBP eCLIP20.22■□□□□ 0.836e-8■■■■□ 21.2
TRAF3-202ENST00000351691 CARMIL2Q6F5E8 1435 aa20.21■□□□□ 0.83
TRAF3-202ENST00000351691 USP35Q9P2H5 1018 aa20.21■□□□□ 0.83
TRAF3-202ENST00000351691 ARID3CA6NKF2 412 aa20.2■□□□□ 0.82
TRAF3-202ENST00000351691 CCDC184Q52MB2 194 aa20.19■□□□□ 0.82
TRAF3-202ENST00000351691 SHROOM2Q13796 1616 aa20.18■□□□□ 0.82
TRAF3-202ENST00000351691 ADGBQ8N7X0 1667 aa20.18■□□□□ 0.82
TRAF3-202ENST00000351691 CCDC7Q96M83 1385 aa20.18■□□□□ 0.82
TRAF3-202ENST00000351691 MRS2Q9HD23 443 aa20.17■□□□□ 0.82
TRAF3-202ENST00000351691 ANKRD30BQ9BXX2 1392 aa20.17■□□□□ 0.82
TRAF3-202ENST00000351691 RPRD2Q5VT52 1461 aaKnown RBP20.17■□□□□ 0.82
TRAF3-202ENST00000351691 SALL2Q9Y467 1007 aaPredicted RBP20.17■□□□□ 0.82
TRAF3-202ENST00000351691 ERCC6L2Q5T890 1561 aa20.16■□□□□ 0.82
TRAF3-202ENST00000351691 PRG4Q92954 1404 aaPredicted RBP20.16■□□□□ 0.82
TRAF3-202ENST00000351691 CLASP1Q7Z460 1538 aa20.15■□□□□ 0.82
TRAF3-202ENST00000351691 C11orf95C9JLR9 678 aaPredicted RBP20.15■□□□□ 0.82
TRAF3-202ENST00000351691 ADGRL2O95490 1459 aa20.15■□□□□ 0.82
TRAF3-202ENST00000351691 CAMSAP2Q08AD1 1489 aa20.15■□□□□ 0.82
TRAF3-202ENST00000351691 FAM9BQ8IZU0 186 aa20.14■□□□□ 0.81
TRAF3-202ENST00000351691 PLB1Q6P1J6 1458 aa20.14■□□□□ 0.81
TRAF3-202ENST00000351691 GPATCH8Q9UKJ3 1502 aaKnown RBP20.13■□□□□ 0.81
TRAF3-202ENST00000351691 CROCC2H7BZ55 1655 aa20.13■□□□□ 0.81
TRAF3-202ENST00000351691 CCDC136Q96JN2 1154 aa20.12■□□□□ 0.81
TRAF3-202ENST00000351691 NUDCQ9Y266 331 aa20.12■□□□□ 0.81
TRAF3-202ENST00000351691 L3MBTL2Q969R5 705 aa20.11■□□□□ 0.81
TRAF3-202ENST00000351691 WASHC2CQ9Y4E1 1318 aa20.1■□□□□ 0.81
TRAF3-202ENST00000351691 CFDP1Q9UEE9 299 aaPredicted RBP20.1■□□□□ 0.81
TRAF3-202ENST00000351691 ZNF644Q9H582 1327 aaPredicted RBP20.09■□□□□ 0.81
TRAF3-202ENST00000351691 ABCA8O94911 1581 aa20.09■□□□□ 0.81
TRAF3-202ENST00000351691 TEX14Q8IWB6 1497 aa20.09■□□□□ 0.81
TRAF3-202ENST00000351691 IL27Q8NEV9 243 aa20.07■□□□□ 0.8
TRAF3-202ENST00000351691 KIF14Q15058 1648 aa20.07■□□□□ 0.8
TRAF3-202ENST00000351691 PZPP20742 1482 aa20.07■□□□□ 0.8
TRAF3-202ENST00000351691 SLC4A1APQ9BWU0 796 aaKnown RBP20.06■□□□□ 0.8
TRAF3-202ENST00000351691 ANKRD30AQ9BXX3 1397 aa20.04■□□□□ 0.8
TRAF3-202ENST00000351691 SHANK2Q9UPX8 1470 aa20.04■□□□□ 0.8
TRAF3-202ENST00000351691 PPM1GO15355 546 aaPredicted RBP20.03■□□□□ 0.8
TRAF3-202ENST00000351691 TCERG1O14776 1098 aaKnown RBP20.03■□□□□ 0.8
TRAF3-202ENST00000351691 SPATA31E1Q6ZUB1 1445 aa20.03■□□□□ 0.8
TRAF3-202ENST00000351691 ABCC10Q5T3U5 1492 aa20.02■□□□□ 0.79
TRAF3-202ENST00000351691 UBE2Q2Q8WVN8 375 aa20.02■□□□□ 0.79
TRAF3-202ENST00000351691 KIAA1107Q9UPP5 1409 aa20.01■□□□□ 0.79
TRAF3-202ENST00000351691 CDC42BPAQ5VT25 1732 aa20.01■□□□□ 0.79
TRAF3-202ENST00000351691 PLEKHD1A6NEE1 506 aa20■□□□□ 0.79
TRAF3-202ENST00000351691 FOXD1Q16676 465 aa20■□□□□ 0.79
TRAF3-202ENST00000351691 PTPRGP23470 1445 aa19.99■□□□□ 0.79
TRAF3-202ENST00000351691 ATP10BO94823 1461 aa19.98■□□□□ 0.79
TRAF3-202ENST00000351691 MS4A1P11836 297 aa19.98■□□□□ 0.79
TRAF3-202ENST00000351691 NBPF8Q3BBV2 869 aa19.98■□□□□ 0.79
TRAF3-202ENST00000351691 KIF7Q2M1P5 1343 aa19.97■□□□□ 0.79
TRAF3-202ENST00000351691 MBD5Q9P267 1494 aa19.97■□□□□ 0.79
TRAF3-202ENST00000351691 NEFMP07197 916 aa19.96■□□□□ 0.79
TRAF3-202ENST00000351691 KDM5DQ9BY66 1539 aa19.95■□□□□ 0.78
TRAF3-202ENST00000351691 ARHGEF5Q12774 1597 aa19.95■□□□□ 0.78
TRAF3-202ENST00000351691 ANKRD50Q9ULJ7 1429 aa19.94■□□□□ 0.78
TRAF3-202ENST00000351691 DHX29Q7Z478 1369 aaKnown RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms