RNA–Protein interactions for RNA: ENST00000350773.8

TSC2-202, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSC2, Length 5,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-202ENST00000350773 CFAP44Q96MT7 982 aa20.49■□□□□ 0.87
TSC2-202ENST00000350773 SMARCA2P51531 1590 aa20.48■□□□□ 0.87
TSC2-202ENST00000350773 FOXD1Q16676 465 aa20.47■□□□□ 0.87
TSC2-202ENST00000350773 ROCK2O75116 1388 aaKnown RBP20.45■□□□□ 0.87
TSC2-202ENST00000350773 PLEKHG5O94827 1062 aa20.45■□□□□ 0.86
TSC2-202ENST00000350773 PLCB2Q00722 1185 aa20.44■□□□□ 0.86
TSC2-202ENST00000350773 GOLGA6L6A8MZA4 724 aa20.43■□□□□ 0.86
TSC2-202ENST00000350773 WIZO95785 1651 aa20.43■□□□□ 0.86
TSC2-202ENST00000350773 ERCC6Q03468 1493 aa20.42■□□□□ 0.86
TSC2-202ENST00000350773 IPO9Q96P70 1041 aaKnown RBP20.42■□□□□ 0.86
TSC2-202ENST00000350773 OS9Q13438 667 aaPredicted RBP20.41■□□□□ 0.86
TSC2-202ENST00000350773 MSNP26038 577 aaKnown RBP20.41■□□□□ 0.86
TSC2-202ENST00000350773 A0A0G2JS52 829 aa20.41■□□□□ 0.86
TSC2-202ENST00000350773 MCCP23508 829 aa20.41■□□□□ 0.86
TSC2-202ENST00000350773 PTMSP20962 102 aa20.4■□□□□ 0.86
TSC2-202ENST00000350773 IPO8O15397 1037 aaKnown RBP20.4■□□□□ 0.86
TSC2-202ENST00000350773 HAP1P54257 671 aaPredicted RBP20.4■□□□□ 0.86
TSC2-202ENST00000350773 DHX57Q6P158 1386 aaKnown RBP20.4■□□□□ 0.86
TSC2-202ENST00000350773 ANKRD30AQ9BXX3 1397 aa20.39■□□□□ 0.86
TSC2-202ENST00000350773 SPRYD3Q8NCJ5 442 aa20.39■□□□□ 0.85
TSC2-202ENST00000350773 RWDD1Q9H446 243 aaPredicted RBP20.39■□□□□ 0.85
TSC2-202ENST00000350773 SRPK2P78362 688 aaKnown RBP20.37■□□□□ 0.85
TSC2-202ENST00000350773 NUP155O75694 1391 aa20.37■□□□□ 0.85
TSC2-202ENST00000350773 KCNJ4P48050 445 aa20.37■□□□□ 0.85
TSC2-202ENST00000350773 PDE3BQ13370 1112 aa20.37■□□□□ 0.85
TSC2-202ENST00000350773 ARID4BQ4LE39 1312 aaPredicted RBP20.37■□□□□ 0.85
TSC2-202ENST00000350773 GBP4Q96PP9 640 aa20.36■□□□□ 0.85
TSC2-202ENST00000350773 L3MBTL2Q969R5 705 aa20.36■□□□□ 0.85
TSC2-202ENST00000350773 NRDCO43847 1150 aa20.35■□□□□ 0.85
TSC2-202ENST00000350773 FGD1P98174 961 aa20.35■□□□□ 0.85
TSC2-202ENST00000350773 RAPGEF2Q9Y4G8 1499 aa20.34■□□□□ 0.85
TSC2-202ENST00000350773 CHAF1AQ13111 956 aaPredicted RBP20.34■□□□□ 0.85
TSC2-202ENST00000350773 CARMIL2Q6F5E8 1435 aa20.34■□□□□ 0.85
TSC2-202ENST00000350773 PMFBP1Q8TBY8 1022 aa20.34■□□□□ 0.85
TSC2-202ENST00000350773 GOLGA6L4A6NEF3 574 aa20.34■□□□□ 0.85
TSC2-202ENST00000350773 NLRP13Q86W25 1043 aa20.32■□□□□ 0.84
TSC2-202ENST00000350773 EIF3AQ14152 1382 aaKnown RBP20.31■□□□□ 0.84
TSC2-202ENST00000350773 CALD1Q05682 793 aaKnown RBP20.3■□□□□ 0.84
TSC2-202ENST00000350773 PHLDB1Q86UU1 1377 aa20.3■□□□□ 0.84
TSC2-202ENST00000350773 GOLGA2Q08379 1002 aa20.29■□□□□ 0.84
TSC2-202ENST00000350773 HDGFL2Q7Z4V5 671 aaPredicted RBP20.28■□□□□ 0.84
TSC2-202ENST00000350773 SLKQ9H2G2 1235 aaPredicted RBP20.28■□□□□ 0.84
TSC2-202ENST00000350773 FHOD3Q2V2M9 1422 aa20.28■□□□□ 0.84
TSC2-202ENST00000350773 ITPRIPQ8IWB1 547 aa20.28■□□□□ 0.84
TSC2-202ENST00000350773 KIF15Q9NS87 1388 aa20.27■□□□□ 0.84
TSC2-202ENST00000350773 U2AF1L5P0DN76 240 aaPredicted RBP20.27■□□□□ 0.84
TSC2-202ENST00000350773 U2AF1Q01081 240 aaKnown RBP eCLIP20.27■□□□□ 0.84
TSC2-202ENST00000350773 HDGFP51858 240 aaKnown RBP20.26■□□□□ 0.83
TSC2-202ENST00000350773 CCDC18Q5T9S5 1454 aa20.25■□□□□ 0.83
TSC2-202ENST00000350773 SAFB2Q14151 953 aaKnown RBP eCLIP20.24■□□□□ 0.83
TSC2-202ENST00000350773 RTF1Q92541 710 aaKnown RBP20.24■□□□□ 0.83
TSC2-202ENST00000350773 NAP1L2Q9ULW6 460 aaPredicted RBP20.23■□□□□ 0.83
TSC2-202ENST00000350773 MYBBP1AQ9BQG0 1328 aaKnown RBP20.23■□□□□ 0.83
TSC2-202ENST00000350773 PDS5BQ9NTI5 1447 aa20.22■□□□□ 0.83
TSC2-202ENST00000350773 GOLGA6L3A6NEY3 463 aa20.22■□□□□ 0.83
TSC2-202ENST00000350773 GZF1Q9H116 711 aaPredicted RBP20.22■□□□□ 0.83
TSC2-202ENST00000350773 TDRD9Q8NDG6 1382 aaKnown RBP20.21■□□□□ 0.83
TSC2-202ENST00000350773 LMOD2Q6P5Q4 547 aa20.21■□□□□ 0.83
TSC2-202ENST00000350773 USP35Q9P2H5 1018 aa20.2■□□□□ 0.82
TSC2-202ENST00000350773 ZBED9Q6R2W3 1325 aa20.2■□□□□ 0.82
TSC2-202ENST00000350773 CENPJQ9HC77 1338 aaPredicted RBP20.2■□□□□ 0.82
TSC2-202ENST00000350773 DRC7Q8IY82 874 aa20.19■□□□□ 0.82
TSC2-202ENST00000350773 MFAP1P55081 439 aaKnown RBP20.19■□□□□ 0.82
TSC2-202ENST00000350773 KIAA1211Q6ZU35 1233 aa20.18■□□□□ 0.82
TSC2-202ENST00000350773 SMC4Q9NTJ3 1288 aa20.18■□□□□ 0.82
TSC2-202ENST00000350773 EFCAB2Q5VUJ9 269 aa20.17■□□□□ 0.82
TSC2-202ENST00000350773 STK26Q9P289 416 aa20.17■□□□□ 0.82
TSC2-202ENST00000350773 APBB1O00213 710 aa20.17■□□□□ 0.82
TSC2-202ENST00000350773 PRKRIP1Q9H875 184 aaPredicted RBP20.17■□□□□ 0.82
TSC2-202ENST00000350773 SYAP1Q96A49 352 aaPredicted RBP20.16■□□□□ 0.82
TSC2-202ENST00000350773 TAOK2Q9UL54 1235 aa20.16■□□□□ 0.82
TSC2-202ENST00000350773 GGT6Q6P531 493 aa20.16■□□□□ 0.82
TSC2-202ENST00000350773 KIAA2012Q0VF49 1180 aa20.16■□□□□ 0.82
TSC2-202ENST00000350773 RSPH4AQ5TD94 716 aa20.16■□□□□ 0.82
TSC2-202ENST00000350773 RUSC2Q8N2Y8 1516 aa20.15■□□□□ 0.82
TSC2-202ENST00000350773 CENPQQ7L2Z9 268 aaPredicted RBP20.15■□□□□ 0.82
TSC2-202ENST00000350773 SOX12O15370 315 aa20.14■□□□□ 0.82
TSC2-202ENST00000350773 CCDC146Q8IYE0 955 aa20.14■□□□□ 0.81
TSC2-202ENST00000350773 FANCIQ9NVI1 1328 aa20.14■□□□□ 0.81
TSC2-202ENST00000350773 PDE4AP27815 886 aa20.12■□□□□ 0.81
TSC2-202ENST00000350773 SMARCA4P51532 1647 aa20.11■□□□□ 0.81
TSC2-202ENST00000350773 RRP1P56182 461 aaKnown RBP20.11■□□□□ 0.81
TSC2-202ENST00000350773 FAM161AQ3B820 660 aa20.1■□□□□ 0.81
TSC2-202ENST00000350773 HNRNPMP52272 730 aaKnown RBP eCLIP20.1■□□□□ 0.811e-7■■■■□ 25.8
TSC2-202ENST00000350773 CADPSQ9ULU8 1353 aa20.09■□□□□ 0.81
TSC2-202ENST00000350773 ST20-MTHFSA0A0A6YYL1 179 aa20.09■□□□□ 0.81
TSC2-202ENST00000350773 TERF2IPQ9NYB0 399 aa20.09■□□□□ 0.81
TSC2-202ENST00000350773 HTATSF1O43719 755 aaKnown RBP20.08■□□□□ 0.81
TSC2-202ENST00000350773 CLUAP1Q96AJ1 413 aa20.08■□□□□ 0.81
TSC2-202ENST00000350773 HMMRO75330 724 aa20.08■□□□□ 0.8
TSC2-202ENST00000350773 CHMP4AQ9BY43 222 aa20.07■□□□□ 0.8
TSC2-202ENST00000350773 CCDC144AA2RUR9 1427 aa20.06■□□□□ 0.8
TSC2-202ENST00000350773 USP47Q96K76 1375 aa20.05■□□□□ 0.8
TSC2-202ENST00000350773 EXOC6Q8TAG9 804 aa20.05■□□□□ 0.8
TSC2-202ENST00000350773 PANK3Q9H999 370 aa20.05■□□□□ 0.8
TSC2-202ENST00000350773 SPAG9O60271 1321 aaKnown RBP20.05■□□□□ 0.8
TSC2-202ENST00000350773 DDX11L8A8MPP1 907 aa20.05■□□□□ 0.8
TSC2-202ENST00000350773 STK31Q9BXU1 1019 aa20.05■□□□□ 0.8
TSC2-202ENST00000350773 ATAD2BQ9ULI0 1458 aa20.04■□□□□ 0.8
TSC2-202ENST00000350773 LMOD3Q0VAK6 560 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms