RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 DENND4BO75064 1496 aaPredicted RBP35.15■■■■□ 3.22
SNX3-202ENST00000349379 MAP3K1Q13233 1512 aa35.12■■■■□ 3.21
SNX3-202ENST00000349379 ADGRL1O94910 1474 aa35.12■■■■□ 3.21
SNX3-202ENST00000349379 EFCAB2Q5VUJ9 269 aa35.11■■■■□ 3.21
SNX3-202ENST00000349379 RAPGEF3O95398 923 aa35.1■■■■□ 3.21
SNX3-202ENST00000349379 ZMYM4Q5VZL5 1548 aa35.07■■■■□ 3.21
SNX3-202ENST00000349379 GPATCH8Q9UKJ3 1502 aaKnown RBP35.07■■■■□ 3.21
SNX3-202ENST00000349379 SCAPERQ9BY12 1400 aa35.05■■■■□ 3.2
SNX3-202ENST00000349379 SUPT6HQ7KZ85 1726 aaKnown RBP35.04■■■■□ 3.2
SNX3-202ENST00000349379 POGZQ7Z3K3 1410 aa35.03■■■■□ 3.2
SNX3-202ENST00000349379 ABCC1P33527 1531 aa35.01■■■■□ 3.2
SNX3-202ENST00000349379 LRRC9Q6ZRR7 1453 aa35.01■■■■□ 3.19
SNX3-202ENST00000349379 ITSN2Q9NZM3 1697 aa35.01■■■■□ 3.19
SNX3-202ENST00000349379 SAMD9LQ8IVG5 1584 aa34.98■■■■□ 3.19
SNX3-202ENST00000349379 ARHGEF40Q8TER5 1519 aa34.97■■■■□ 3.19
SNX3-202ENST00000349379 CCNB3Q8WWL7 1395 aa34.96■■■■□ 3.19
SNX3-202ENST00000349379 NCOA2Q15596 1464 aa34.95■■■■□ 3.19
SNX3-202ENST00000349379 KDM5CP41229 1560 aa34.95■■■■□ 3.18
SNX3-202ENST00000349379 ARHGEF12Q9NZN5 1544 aa34.93■■■■□ 3.18
SNX3-202ENST00000349379 MAGI2Q86UL8 1455 aa34.93■■■■□ 3.18
SNX3-202ENST00000349379 ZNF518AQ6AHZ1 1483 aa34.92■■■■□ 3.18
SNX3-202ENST00000349379 ZFYVE16Q7Z3T8 1539 aa34.89■■■■□ 3.18
SNX3-202ENST00000349379 KDM4FA0A1W2PPD8 638 aa34.86■■■■□ 3.17
SNX3-202ENST00000349379 KANK4Q5T7N3 995 aaPredicted RBP34.86■■■■□ 3.17
SNX3-202ENST00000349379 AEBP2Q6ZN18 517 aaPredicted RBP34.86■■■■□ 3.17
SNX3-202ENST00000349379 YEATS2Q9ULM3 1422 aa34.84■■■■□ 3.17
SNX3-202ENST00000349379 CFDP1Q9UEE9 299 aaPredicted RBP34.84■■■■□ 3.17
SNX3-202ENST00000349379 SYCP2Q9BX26 1530 aa34.84■■■■□ 3.17
SNX3-202ENST00000349379 HECW2Q9P2P5 1572 aa34.83■■■■□ 3.17
SNX3-202ENST00000349379 TRAPPC8Q9Y2L5 1435 aa34.83■■■■□ 3.17
SNX3-202ENST00000349379 PLEKHH2Q8IVE3 1493 aa34.83■■■■□ 3.17
SNX3-202ENST00000349379 KIAA1107Q9UPP5 1409 aa34.82■■■■□ 3.17
SNX3-202ENST00000349379 AFAP1Q8N556 730 aa34.79■■■■□ 3.16
SNX3-202ENST00000349379 SIGLEC1Q9BZZ2 1709 aa34.78■■■■□ 3.16
SNX3-202ENST00000349379 ZNF777Q9ULD5 760 aaPredicted RBP34.78■■■■□ 3.16
SNX3-202ENST00000349379 MLH3Q9UHC1 1453 aa34.78■■■■□ 3.16
SNX3-202ENST00000349379 KIDINS220Q9ULH0 1771 aa34.75■■■■□ 3.15
SNX3-202ENST00000349379 APLP2Q06481 763 aa34.75■■■■□ 3.15
SNX3-202ENST00000349379 BCORL1Q5H9F3 1711 aa34.72■■■■□ 3.15
SNX3-202ENST00000349379 DIP2CQ9Y2E4 1556 aa34.72■■■■□ 3.15
SNX3-202ENST00000349379 ABCA6Q8N139 1617 aa34.72■■■■□ 3.15
SNX3-202ENST00000349379 ADAMTSL3P82987 1691 aa34.7■■■■□ 3.15
SNX3-202ENST00000349379 ATP10AO60312 1499 aa34.7■■■■□ 3.15
SNX3-202ENST00000349379 MBD5Q9P267 1494 aa34.7■■■■□ 3.15
SNX3-202ENST00000349379 ZNF644Q9H582 1327 aaPredicted RBP34.69■■■■□ 3.14
SNX3-202ENST00000349379 CAMSAP2Q08AD1 1489 aa34.68■■■■□ 3.14
SNX3-202ENST00000349379 REREQ9P2R6 1566 aa34.68■■■■□ 3.14
SNX3-202ENST00000349379 C9orf84Q5VXU9 1444 aa34.67■■■■□ 3.14
SNX3-202ENST00000349379 HNRNPMP52272 730 aaKnown RBP eCLIP34.67■■■■□ 3.14
SNX3-202ENST00000349379 INO80Q9ULG1 1556 aaPredicted RBP34.66■■■■□ 3.14
SNX3-202ENST00000349379 MYOM3Q5VTT5 1437 aa34.65■■■■□ 3.14
SNX3-202ENST00000349379 MIA2Q96PC5 1412 aa34.62■■■■□ 3.13
SNX3-202ENST00000349379 ATP7AQ04656 1500 aa34.6■■■■□ 3.13
SNX3-202ENST00000349379 ARHGEF5Q12774 1597 aa34.6■■■■□ 3.13
SNX3-202ENST00000349379 SPAG9O60271 1321 aaKnown RBP34.55■■■■□ 3.12
SNX3-202ENST00000349379 MADDQ8WXG6 1647 aa34.55■■■■□ 3.12
SNX3-202ENST00000349379 ARID4BQ4LE39 1312 aaPredicted RBP34.55■■■■□ 3.12
SNX3-202ENST00000349379 CCDC141Q6ZP82 1450 aa34.54■■■■□ 3.12
SNX3-202ENST00000349379 AGLP35573 1532 aa34.52■■■■□ 3.12
SNX3-202ENST00000349379 MYT1LQ9UL68 1186 aa34.52■■■■□ 3.12
SNX3-202ENST00000349379 RTEL1-TNFRSF6BF6WH68 1400 aa34.49■■■■□ 3.11
SNX3-202ENST00000349379 PTPN23Q9H3S7 1636 aa34.49■■■■□ 3.11
SNX3-202ENST00000349379 RSPH4AQ5TD94 716 aa34.49■■■■□ 3.11
SNX3-202ENST00000349379 ADGBQ8N7X0 1667 aa34.49■■■■□ 3.11
SNX3-202ENST00000349379 PLXNC1O60486 1568 aa34.47■■■■□ 3.11
SNX3-202ENST00000349379 FER1L4A9Z1Z3 1794 aa34.46■■■■□ 3.11
SNX3-202ENST00000349379 RIMS1Q86UR5 1692 aaKnown RBP34.45■■■■□ 3.11
SNX3-202ENST00000349379 FGD6Q6ZV73 1430 aa34.45■■■■□ 3.11
SNX3-202ENST00000349379 TCOF1Q13428 1488 aaKnown RBP34.44■■■■□ 3.1
SNX3-202ENST00000349379 MAST1Q9Y2H9 1570 aa34.43■■■■□ 3.1
SNX3-202ENST00000349379 PTPRMP28827 1452 aa34.41■■■■□ 3.1
SNX3-202ENST00000349379 A2MP01023 1474 aa34.39■■■■□ 3.1
SNX3-202ENST00000349379 CROCC2H7BZ55 1655 aa34.39■■■■□ 3.1
SNX3-202ENST00000349379 DNMT1P26358 1616 aaKnown RBP34.34■■■■□ 3.09
SNX3-202ENST00000349379 MLECQ14165 292 aa34.34■■■■□ 3.09
SNX3-202ENST00000349379 SHANK2Q9UPX8 1470 aa34.29■■■■□ 3.08
SNX3-202ENST00000349379 TSPY4P0CV99 314 aa34.29■■■■□ 3.08
SNX3-202ENST00000349379 TSPY10P0CW01 314 aa34.29■■■■□ 3.08
SNX3-202ENST00000349379 ABCC5O15440 1437 aa34.28■■■■□ 3.08
SNX3-202ENST00000349379 DHX29Q7Z478 1369 aaKnown RBP34.25■■■■□ 3.07
SNX3-202ENST00000349379 DAPK1P53355 1430 aa34.24■■■■□ 3.07
SNX3-202ENST00000349379 MROH2AA6NES4 1674 aa34.19■■■■□ 3.06
SNX3-202ENST00000349379 C3P01024 1663 aa34.17■■■■□ 3.06
SNX3-202ENST00000349379 EIF2AK4Q9P2K8 1649 aaKnown RBP34.15■■■■□ 3.06
SNX3-202ENST00000349379 CNTLNQ9NXG0 1405 aa34.13■■■■□ 3.05
SNX3-202ENST00000349379 PPARGC1BQ86YN6 1023 aaKnown RBP34.13■■■■□ 3.05
SNX3-202ENST00000349379 CLTCQ00610 1675 aaKnown RBP34.12■■■■□ 3.05
SNX3-202ENST00000349379 DUOX2Q9NRD8 1548 aa34.11■■■■□ 3.05
SNX3-202ENST00000349379 RNF17Q9BXT8 1623 aaKnown RBP34.1■■■■□ 3.05
SNX3-202ENST00000349379 FAM50AQ14320 339 aaKnown RBP34.07■■■■□ 3.04
SNX3-202ENST00000349379 FAM135AQ9P2D6 1515 aa34.07■■■■□ 3.04
SNX3-202ENST00000349379 SETD1BQ9UPS6 1966 aaKnown RBP34.07■■■■□ 3.04
SNX3-202ENST00000349379 ADGRL2O95490 1459 aa34.07■■■■□ 3.04
SNX3-202ENST00000349379 PPP6R1Q9UPN7 881 aa34.06■■■■□ 3.04
SNX3-202ENST00000349379 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.05■■■■□ 3.04
SNX3-202ENST00000349379 KIF15Q9NS87 1388 aa34.04■■■■□ 3.04
SNX3-202ENST00000349379 KIF3BO15066 747 aa34.04■■■■□ 3.04
SNX3-202ENST00000349379 GGT6Q6P531 493 aa34.04■■■■□ 3.04
SNX3-202ENST00000349379 ESF1Q9H501 851 aaKnown RBP34.02■■■■□ 3.04
SNX3-202ENST00000349379 NCOA1Q15788 1441 aa34.02■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms