RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 EIF4G2P78344 907 aaKnown RBP eCLIP14.02□□□□□ -0.16
CHRNA1-202ENST00000348749 IL27Q8NEV9 243 aa14.02□□□□□ -0.17
CHRNA1-202ENST00000348749 DENND4BO75064 1496 aaPredicted RBP14.01□□□□□ -0.17
CHRNA1-202ENST00000348749 MAGI3Q5TCQ9 1506 aa14.01□□□□□ -0.17
CHRNA1-202ENST00000348749 UBE2Q2Q8WVN8 375 aa14.01□□□□□ -0.17
CHRNA1-202ENST00000348749 ROCK1Q13464 1354 aa14.01□□□□□ -0.17
CHRNA1-202ENST00000348749 NCOA1Q15788 1441 aa14□□□□□ -0.17
CHRNA1-202ENST00000348749 PDS5BQ9NTI5 1447 aa14□□□□□ -0.17
CHRNA1-202ENST00000348749 NESP48681 1621 aa14□□□□□ -0.17
CHRNA1-202ENST00000348749 HSPA5P11021 654 aaKnown RBP14□□□□□ -0.17
CHRNA1-202ENST00000348749 C11orf95C9JLR9 678 aaPredicted RBP13.99□□□□□ -0.17
CHRNA1-202ENST00000348749 USP35Q9P2H5 1018 aa13.99□□□□□ -0.17
CHRNA1-202ENST00000348749 EPRSP07814 1512 aaKnown RBP13.98□□□□□ -0.17
CHRNA1-202ENST00000348749 TARBP1Q13395 1621 aaKnown RBP13.98□□□□□ -0.17
CHRNA1-202ENST00000348749 IQGAP2Q13576 1575 aa13.98□□□□□ -0.17
CHRNA1-202ENST00000348749 SMG6Q86US8 1419 aaKnown RBP13.98□□□□□ -0.17
CHRNA1-202ENST00000348749 RNF123Q5XPI4 1314 aa13.97□□□□□ -0.17
CHRNA1-202ENST00000348749 WDR62O43379 1518 aa13.96□□□□□ -0.17
CHRNA1-202ENST00000348749 RPRD2Q5VT52 1461 aaKnown RBP13.96□□□□□ -0.17
CHRNA1-202ENST00000348749 TDRD9Q8NDG6 1382 aaKnown RBP13.96□□□□□ -0.17
CHRNA1-202ENST00000348749 WASHC2CQ9Y4E1 1318 aa13.96□□□□□ -0.17
CHRNA1-202ENST00000348749 PBRM1Q86U86 1689 aa13.96□□□□□ -0.18
CHRNA1-202ENST00000348749 CCDC7Q96M83 1385 aa13.95□□□□□ -0.18
CHRNA1-202ENST00000348749 CCDC184Q52MB2 194 aa13.95□□□□□ -0.18
CHRNA1-202ENST00000348749 CCDC136Q96JN2 1154 aa13.94□□□□□ -0.18
CHRNA1-202ENST00000348749 PRKRIP1Q9H875 184 aaPredicted RBP13.94□□□□□ -0.18
CHRNA1-202ENST00000348749 DNMT1P26358 1616 aaKnown RBP13.94□□□□□ -0.18
CHRNA1-202ENST00000348749 MPHOSPH9Q99550 1183 aa13.94□□□□□ -0.18
CHRNA1-202ENST00000348749 KDM6BO15054 1643 aa13.93□□□□□ -0.18
CHRNA1-202ENST00000348749 ANKRD30BQ9BXX2 1392 aa13.92□□□□□ -0.18
CHRNA1-202ENST00000348749 TEX14Q8IWB6 1497 aa13.92□□□□□ -0.18
CHRNA1-202ENST00000348749 ADAMTS12P58397 1594 aa13.92□□□□□ -0.18
CHRNA1-202ENST00000348749 SPATA31E1Q6ZUB1 1445 aa13.91□□□□□ -0.18
CHRNA1-202ENST00000348749 MRS2Q9HD23 443 aa13.91□□□□□ -0.18
CHRNA1-202ENST00000348749 RRP7BPQ9NSQ0 103 aa13.91□□□□□ -0.18
CHRNA1-202ENST00000348749 FAM9BQ8IZU0 186 aa13.9□□□□□ -0.18
CHRNA1-202ENST00000348749 DAPK1P53355 1430 aa13.9□□□□□ -0.18
CHRNA1-202ENST00000348749 L3MBTL2Q969R5 705 aa13.89□□□□□ -0.19
CHRNA1-202ENST00000348749 RTN4Q9NQC3 1192 aaKnown RBP13.89□□□□□ -0.19
CHRNA1-202ENST00000348749 NUDCQ9Y266 331 aa13.88□□□□□ -0.19
CHRNA1-202ENST00000348749 ARID4BQ4LE39 1312 aaPredicted RBP13.87□□□□□ -0.19
CHRNA1-202ENST00000348749 CDK13Q14004 1512 aaKnown RBP13.86□□□□□ -0.19
CHRNA1-202ENST00000348749 PPM1GO15355 546 aaPredicted RBP13.86□□□□□ -0.19
CHRNA1-202ENST00000348749 NEFMP07197 916 aa13.85□□□□□ -0.19
CHRNA1-202ENST00000348749 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.85□□□□□ -0.19
CHRNA1-202ENST00000348749 ADGBQ8N7X0 1667 aa13.85□□□□□ -0.19
CHRNA1-202ENST00000348749 CHIC2Q9UKJ5 165 aa13.85□□□□□ -0.19
CHRNA1-202ENST00000348749 ABCC5O15440 1437 aa13.85□□□□□ -0.19
CHRNA1-202ENST00000348749 MBD5Q9P267 1494 aa13.83□□□□□ -0.19
CHRNA1-202ENST00000348749 ITSN2Q9NZM3 1697 aa13.83□□□□□ -0.2
CHRNA1-202ENST00000348749 KIAA0556O60303 1618 aa13.82□□□□□ -0.2
CHRNA1-202ENST00000348749 TCERG1O14776 1098 aaKnown RBP13.82□□□□□ -0.2
CHRNA1-202ENST00000348749 KIF7Q2M1P5 1343 aa13.82□□□□□ -0.2
CHRNA1-202ENST00000348749 KIAA0586Q9BVV6 1533 aa13.81□□□□□ -0.2
CHRNA1-202ENST00000348749 ADGRL2O95490 1459 aa13.81□□□□□ -0.2
CHRNA1-202ENST00000348749 KIF14Q15058 1648 aa13.81□□□□□ -0.2
CHRNA1-202ENST00000348749 RAPGEF6Q8TEU7 1601 aa13.81□□□□□ -0.2
CHRNA1-202ENST00000348749 ROCK2O75116 1388 aaKnown RBP13.8□□□□□ -0.2
CHRNA1-202ENST00000348749 NBPF8Q3BBV2 869 aa13.8□□□□□ -0.2
CHRNA1-202ENST00000348749 ADCY10Q96PN6 1610 aa13.79□□□□□ -0.2
CHRNA1-202ENST00000348749 PZPP20742 1482 aa13.79□□□□□ -0.2
CHRNA1-202ENST00000348749 CROCC2H7BZ55 1655 aa13.79□□□□□ -0.2
CHRNA1-202ENST00000348749 MS4A1P11836 297 aa13.78□□□□□ -0.2
CHRNA1-202ENST00000348749 NUP153P49790 1475 aaKnown RBP13.78□□□□□ -0.2
CHRNA1-202ENST00000348749 LAS1LQ9Y4W2 734 aaKnown RBP13.78□□□□□ -0.2
CHRNA1-202ENST00000348749 KIAA1107Q9UPP5 1409 aa13.77□□□□□ -0.21
CHRNA1-202ENST00000348749 SLC4A1APQ9BWU0 796 aaKnown RBP13.77□□□□□ -0.21
CHRNA1-202ENST00000348749 DISP1Q96F81 1524 aa13.77□□□□□ -0.21
CHRNA1-202ENST00000348749 DHX29Q7Z478 1369 aaKnown RBP13.77□□□□□ -0.21
CHRNA1-202ENST00000348749 KTN1Q86UP2 1357 aaKnown RBP13.77□□□□□ -0.21
CHRNA1-202ENST00000348749 UHRF1BP1Q6BDS2 1440 aa13.76□□□□□ -0.21
CHRNA1-202ENST00000348749 MRC2Q9UBG0 1479 aa13.76□□□□□ -0.21
CHRNA1-202ENST00000348749 PDE4AP27815 886 aa13.76□□□□□ -0.21
CHRNA1-202ENST00000348749 GSE1Q14687 1217 aa13.76□□□□□ -0.21
CHRNA1-202ENST00000348749 BACH2Q9BYV9 841 aa13.76□□□□□ -0.21
CHRNA1-202ENST00000348749 KDM5CP41229 1560 aa13.75□□□□□ -0.21
CHRNA1-202ENST00000348749 TROQ12816 1431 aaPredicted RBP13.75□□□□□ -0.21
CHRNA1-202ENST00000348749 ARHGEF12Q9NZN5 1544 aa13.75□□□□□ -0.21
CHRNA1-202ENST00000348749 IFT140Q96RY7 1462 aa13.75□□□□□ -0.21
CHRNA1-202ENST00000348749 CAMSAP2Q08AD1 1489 aa13.74□□□□□ -0.21
CHRNA1-202ENST00000348749 DDRGK1Q96HY6 314 aa13.74□□□□□ -0.21
CHRNA1-202ENST00000348749 BRPF3Q9ULD4 1205 aa13.74□□□□□ -0.21
CHRNA1-202ENST00000348749 NPM2Q86SE8 214 aaKnown RBP13.73□□□□□ -0.21
CHRNA1-202ENST00000348749 RALGAPBQ86X10 1494 aa13.73□□□□□ -0.21
CHRNA1-202ENST00000348749 BCORL1Q5H9F3 1711 aa13.72□□□□□ -0.21
CHRNA1-202ENST00000348749 SHANK2Q9UPX8 1470 aa13.72□□□□□ -0.21
CHRNA1-202ENST00000348749 KDM5DQ9BY66 1539 aa13.71□□□□□ -0.21
CHRNA1-202ENST00000348749 USP47Q96K76 1375 aa13.71□□□□□ -0.21
CHRNA1-202ENST00000348749 FOXD1Q16676 465 aa13.71□□□□□ -0.21
CHRNA1-202ENST00000348749 RSPH6AQ9H0K4 717 aa13.71□□□□□ -0.22
CHRNA1-202ENST00000348749 ANKRD30AQ9BXX3 1397 aa13.7□□□□□ -0.22
CHRNA1-202ENST00000348749 GPATCH8Q9UKJ3 1502 aaKnown RBP13.69□□□□□ -0.22
CHRNA1-202ENST00000348749 RRP1P56182 461 aaKnown RBP13.69□□□□□ -0.22
CHRNA1-202ENST00000348749 GRIN2AQ12879 1464 aa13.68□□□□□ -0.22
CHRNA1-202ENST00000348749 KIF15Q9NS87 1388 aa13.67□□□□□ -0.22
CHRNA1-202ENST00000348749 NFKBIBQ15653 356 aa13.67□□□□□ -0.22
CHRNA1-202ENST00000348749 FAM43AQ8N2R8 423 aa13.67□□□□□ -0.22
CHRNA1-202ENST00000348749 BRD4O60885 1362 aaPredicted RBP13.67□□□□□ -0.22
CHRNA1-202ENST00000348749 LRPPRCP42704 1394 aaKnown RBP13.66□□□□□ -0.22
CHRNA1-202ENST00000348749 E9PCH4 1651 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms