RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 TAOK2Q9UL54 1235 aa14.21□□□□□ -0.13
SMARCE1-202ENST00000348513 CARMIL1Q5VZK9 1371 aa14.19□□□□□ -0.14
SMARCE1-202ENST00000348513 SOGA1O94964 1423 aa14.19□□□□□ -0.14
SMARCE1-202ENST00000348513 GSE1Q14687 1217 aa14.19□□□□□ -0.14
SMARCE1-202ENST00000348513 ZMYND15Q9H091 742 aa14.18□□□□□ -0.14
SMARCE1-202ENST00000348513 NUDCQ9Y266 331 aa14.17□□□□□ -0.14
SMARCE1-202ENST00000348513 BAZ1AQ9NRL2 1556 aaPredicted RBP14.17□□□□□ -0.14
SMARCE1-202ENST00000348513 NPHP1O15259 732 aa14.17□□□□□ -0.14
SMARCE1-202ENST00000348513 RRP9O43818 475 aaKnown RBP14.17□□□□□ -0.14
SMARCE1-202ENST00000348513 IL27Q8NEV9 243 aa14.16□□□□□ -0.14
SMARCE1-202ENST00000348513 GGT6Q6P531 493 aa14.16□□□□□ -0.14
SMARCE1-202ENST00000348513 TULP1O00294 542 aaPredicted RBP14.16□□□□□ -0.14
SMARCE1-202ENST00000348513 FOXD1Q16676 465 aa14.16□□□□□ -0.14
SMARCE1-202ENST00000348513 RGS3P49796 1198 aa14.15□□□□□ -0.14
SMARCE1-202ENST00000348513 SRPK2P78362 688 aaKnown RBP14.15□□□□□ -0.14
SMARCE1-202ENST00000348513 STK26Q9P289 416 aa14.15□□□□□ -0.14
SMARCE1-202ENST00000348513 ZNF771Q7L3S4 317 aaPredicted RBP14.14□□□□□ -0.15
SMARCE1-202ENST00000348513 GOLGA6L3A6NEY3 463 aa14.14□□□□□ -0.15
SMARCE1-202ENST00000348513 KANK1Q14678 1352 aa14.13□□□□□ -0.15
SMARCE1-202ENST00000348513 CASC1Q6TDU7 716 aa14.11□□□□□ -0.15
SMARCE1-202ENST00000348513 MAP7D2Q96T17 732 aa14.11□□□□□ -0.15
SMARCE1-202ENST00000348513 TMF1P82094 1093 aa14.11□□□□□ -0.15
SMARCE1-202ENST00000348513 OS9Q13438 667 aaPredicted RBP14.1□□□□□ -0.15
SMARCE1-202ENST00000348513 FHAD1B1AJZ9 1412 aa14.1□□□□□ -0.15
SMARCE1-202ENST00000348513 FAM43AQ8N2R8 423 aa14.1□□□□□ -0.15
SMARCE1-202ENST00000348513 ABCC8Q09428 1581 aa14.09□□□□□ -0.15
SMARCE1-202ENST00000348513 HOMEZQ8IX15 550 aa14.09□□□□□ -0.15
SMARCE1-202ENST00000348513 TPM2P07951 284 aa14.08□□□□□ -0.16
SMARCE1-202ENST00000348513 KANK4Q5T7N3 995 aaPredicted RBP14.07□□□□□ -0.16
SMARCE1-202ENST00000348513 PKD2Q13563 968 aa14.07□□□□□ -0.16
SMARCE1-202ENST00000348513 PATL2C9JE40 543 aaKnown RBP14.07□□□□□ -0.16
SMARCE1-202ENST00000348513 MORC1Q86VD1 984 aa14.06□□□□□ -0.16
SMARCE1-202ENST00000348513 MTERF4Q7Z6M4 381 aaKnown RBP14.06□□□□□ -0.16
SMARCE1-202ENST00000348513 TDRD9Q8NDG6 1382 aaKnown RBP14.06□□□□□ -0.16
SMARCE1-202ENST00000348513 SETQ01105 290 aaPredicted RBP14.04□□□□□ -0.16
SMARCE1-202ENST00000348513 B4GALNT3Q6L9W6 998 aa14.04□□□□□ -0.16
SMARCE1-202ENST00000348513 GOLGA6L6A8MZA4 724 aa14.03□□□□□ -0.16
SMARCE1-202ENST00000348513 PAK3O75914 559 aaPredicted RBP14.03□□□□□ -0.16
SMARCE1-202ENST00000348513 HSPA5P11021 654 aaKnown RBP14.03□□□□□ -0.16
SMARCE1-202ENST00000348513 NAP1L2Q9ULW6 460 aaPredicted RBP14.03□□□□□ -0.16
SMARCE1-202ENST00000348513 CCDC88BA6NC98 1476 aa14.03□□□□□ -0.16
SMARCE1-202ENST00000348513 RBM10P98175 930 aaKnown RBP14.03□□□□□ -0.16
SMARCE1-202ENST00000348513 ARHGAP35Q9NRY4 1499 aa14.03□□□□□ -0.16
SMARCE1-202ENST00000348513 ZRSR1Q15695 479 aaKnown RBP14.02□□□□□ -0.16
SMARCE1-202ENST00000348513 HDGFP51858 240 aaKnown RBP14.02□□□□□ -0.17
SMARCE1-202ENST00000348513 GOLGA6L1Q8N7Z2 621 aa14.02□□□□□ -0.17
SMARCE1-202ENST00000348513 NUTM2DQ5VT03 806 aaPredicted RBP14.01□□□□□ -0.17
SMARCE1-202ENST00000348513 TAF3Q5VWG9 929 aa14.01□□□□□ -0.17
SMARCE1-202ENST00000348513 MROH2BQ7Z745 1585 aa14.01□□□□□ -0.17
SMARCE1-202ENST00000348513 FAM13BQ9NYF5 915 aa14.01□□□□□ -0.17
SMARCE1-202ENST00000348513 BBXQ8WY36 941 aaPredicted RBP14.01□□□□□ -0.17
SMARCE1-202ENST00000348513 KCNJ4P48050 445 aa14□□□□□ -0.17
SMARCE1-202ENST00000348513 FGD1P98174 961 aa14□□□□□ -0.17
SMARCE1-202ENST00000348513 PAXIP1Q6ZW49 1069 aaPredicted RBP14□□□□□ -0.17
SMARCE1-202ENST00000348513 SETD5Q9C0A6 1442 aa14□□□□□ -0.17
SMARCE1-202ENST00000348513 GOLGA2Q08379 1002 aa14□□□□□ -0.17
SMARCE1-202ENST00000348513 APBB1O00213 710 aa13.98□□□□□ -0.17
SMARCE1-202ENST00000348513 CARMIL2Q6F5E8 1435 aa13.98□□□□□ -0.17
SMARCE1-202ENST00000348513 KIAA2012Q0VF49 1180 aa13.97□□□□□ -0.17
SMARCE1-202ENST00000348513 PLCB2Q00722 1185 aa13.97□□□□□ -0.17
SMARCE1-202ENST00000348513 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.97□□□□□ -0.17
SMARCE1-202ENST00000348513 HSP90AB1P08238 724 aaKnown RBP13.96□□□□□ -0.17
SMARCE1-202ENST00000348513 HNRNPMP52272 730 aaKnown RBP eCLIP13.96□□□□□ -0.17
SMARCE1-202ENST00000348513 RTF1Q92541 710 aaKnown RBP13.96□□□□□ -0.17
SMARCE1-202ENST00000348513 ZNF330Q9Y3S2 320 aaPredicted RBP13.96□□□□□ -0.17
SMARCE1-202ENST00000348513 CCDC66A2RUB6 948 aa13.95□□□□□ -0.18
SMARCE1-202ENST00000348513 NUP155O75694 1391 aa13.95□□□□□ -0.18
SMARCE1-202ENST00000348513 HDGFL2Q7Z4V5 671 aaPredicted RBP13.95□□□□□ -0.18
SMARCE1-202ENST00000348513 ROCK2O75116 1388 aaKnown RBP13.95□□□□□ -0.18
SMARCE1-202ENST00000348513 SPRYD3Q8NCJ5 442 aa13.95□□□□□ -0.18
SMARCE1-202ENST00000348513 PDS5BQ9NTI5 1447 aa13.95□□□□□ -0.18
SMARCE1-202ENST00000348513 BRPF3Q9ULD4 1205 aa13.95□□□□□ -0.18
SMARCE1-202ENST00000348513 MPHOSPH9Q99550 1183 aa13.94□□□□□ -0.18
SMARCE1-202ENST00000348513 CSB-PGBD3P0DP91 1061 aa13.94□□□□□ -0.18
SMARCE1-202ENST00000348513 KIF3BO15066 747 aa13.94□□□□□ -0.18
SMARCE1-202ENST00000348513 BCL11BQ9C0K0 894 aaPredicted RBP13.94□□□□□ -0.18
SMARCE1-202ENST00000348513 VPS8Q8N3P4 1428 aa13.94□□□□□ -0.18
SMARCE1-202ENST00000348513 MS4A1P11836 297 aa13.93□□□□□ -0.18
SMARCE1-202ENST00000348513 EFCAB2Q5VUJ9 269 aa13.92□□□□□ -0.18
SMARCE1-202ENST00000348513 CHMP4BQ9H444 224 aaKnown RBP13.92□□□□□ -0.18
SMARCE1-202ENST00000348513 U2AF1L5P0DN76 240 aaPredicted RBP13.92□□□□□ -0.18
SMARCE1-202ENST00000348513 U2AF1Q01081 240 aaKnown RBP eCLIP13.92□□□□□ -0.18
SMARCE1-202ENST00000348513 GZF1Q9H116 711 aaPredicted RBP13.91□□□□□ -0.18
SMARCE1-202ENST00000348513 KTN1Q86UP2 1357 aaKnown RBP13.91□□□□□ -0.18
SMARCE1-202ENST00000348513 RAB3GAP2Q9H2M9 1393 aa13.9□□□□□ -0.18
SMARCE1-202ENST00000348513 NUTM2FA1L443 756 aa13.9□□□□□ -0.18
SMARCE1-202ENST00000348513 NOM1Q5C9Z4 860 aaKnown RBP13.9□□□□□ -0.18
SMARCE1-202ENST00000348513 ISY1Q9ULR0 285 aaKnown RBP13.89□□□□□ -0.19
SMARCE1-202ENST00000348513 SMARCA2P51531 1590 aa13.89□□□□□ -0.19
SMARCE1-202ENST00000348513 TCERG1O14776 1098 aaKnown RBP13.88□□□□□ -0.19
SMARCE1-202ENST00000348513 FHOD3Q2V2M9 1422 aa13.88□□□□□ -0.19
SMARCE1-202ENST00000348513 CSPP1Q1MSJ5 1256 aa13.87□□□□□ -0.19
SMARCE1-202ENST00000348513 CCDC9Q9Y3X0 531 aaKnown RBP13.87□□□□□ -0.19
SMARCE1-202ENST00000348513 ANKRD30AQ9BXX3 1397 aa13.87□□□□□ -0.19
SMARCE1-202ENST00000348513 WIZO95785 1651 aa13.87□□□□□ -0.19
SMARCE1-202ENST00000348513 IRX3P78415 501 aaPredicted RBP13.87□□□□□ -0.19
SMARCE1-202ENST00000348513 FMN1Q68DA7 1419 aa13.85□□□□□ -0.19
SMARCE1-202ENST00000348513 ITPRIPQ8IWB1 547 aa13.85□□□□□ -0.19
SMARCE1-202ENST00000348513 CCDC146Q8IYE0 955 aa13.84□□□□□ -0.19
SMARCE1-202ENST00000348513 WASHC2CQ9Y4E1 1318 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms