RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 ZNF644Q9H582 1327 aaPredicted RBP27.74■■■□□ 2.03
PTN-201ENST00000348225 CDC42BPBQ9Y5S2 1711 aa27.74■■■□□ 2.03
PTN-201ENST00000348225 NPM1P06748 294 aaKnown RBP eCLIP27.74■■■□□ 2.03
PTN-201ENST00000348225 DNAJC5Q9H3Z4 198 aa27.74■■■□□ 2.03
PTN-201ENST00000348225 AKNAQ7Z591 1439 aa27.73■■■□□ 2.03
PTN-201ENST00000348225 RIMBP3CA6NJZ7 1639 aa27.72■■■□□ 2.03
PTN-201ENST00000348225 RIMBP3BA6NNM3 1639 aa27.72■■■□□ 2.03
PTN-201ENST00000348225 RIMBP3Q9UFD9 1639 aa27.72■■■□□ 2.03
PTN-201ENST00000348225 ZNF777Q9ULD5 760 aaPredicted RBP27.72■■■□□ 2.03
PTN-201ENST00000348225 KCNH8Q96L42 1107 aa27.71■■■□□ 2.03
PTN-201ENST00000348225 ABCC5O15440 1437 aa27.71■■■□□ 2.03
PTN-201ENST00000348225 GCC2Q8IWJ2 1684 aa27.69■■■□□ 2.02
PTN-201ENST00000348225 DHX57Q6P158 1386 aaKnown RBP27.68■■■□□ 2.02
PTN-201ENST00000348225 ARHGAP5Q13017 1502 aa27.68■■■□□ 2.02
PTN-201ENST00000348225 CROCC2H7BZ55 1655 aa27.68■■■□□ 2.02
PTN-201ENST00000348225 ASXL2Q76L83 1435 aa27.67■■■□□ 2.02
PTN-201ENST00000348225 NAIPQ13075 1403 aa27.67■■■□□ 2.02
PTN-201ENST00000348225 ROCK1Q13464 1354 aa27.66■■■□□ 2.02
PTN-201ENST00000348225 SAMD9LQ8IVG5 1584 aa27.65■■■□□ 2.02
PTN-201ENST00000348225 ADGBQ8N7X0 1667 aa27.63■■■□□ 2.01
PTN-201ENST00000348225 CHIC2Q9UKJ5 165 aa27.63■■■□□ 2.01
PTN-201ENST00000348225 CLSPNQ9HAW4 1339 aa27.63■■■□□ 2.01
PTN-201ENST00000348225 ARHGEF5Q12774 1597 aa27.63■■■□□ 2.01
PTN-201ENST00000348225 PLCH2O75038 1416 aa27.62■■■□□ 2.01
PTN-201ENST00000348225 ABCA9Q8IUA7 1624 aa27.61■■■□□ 2.01
PTN-201ENST00000348225 ARAP3Q8WWN8 1544 aa27.61■■■□□ 2.01
PTN-201ENST00000348225 PLEKHH2Q8IVE3 1493 aa27.6■■■□□ 2.01
PTN-201ENST00000348225 SHANK2Q9UPX8 1470 aa27.6■■■□□ 2.01
PTN-201ENST00000348225 RRP7BPQ9NSQ0 103 aa27.57■■■□□ 2
PTN-201ENST00000348225 ADGRL2O95490 1459 aa27.57■■■□□ 2
PTN-201ENST00000348225 RSPH4AQ5TD94 716 aa27.55■■■□□ 2
PTN-201ENST00000348225 CYB5RLQ6IPT4 315 aa27.55■■■□□ 2
PTN-201ENST00000348225 CCDC141Q6ZP82 1450 aa27.54■■■□□ 2
PTN-201ENST00000348225 MBD5Q9P267 1494 aa27.54■■■□□ 2
PTN-201ENST00000348225 KIAA1107Q9UPP5 1409 aa27.53■■■□□ 2
PTN-201ENST00000348225 EFCAB2Q5VUJ9 269 aa27.53■■■□□ 2
PTN-201ENST00000348225 SYCP2Q9BX26 1530 aa27.53■■■□□ 2
PTN-201ENST00000348225 ACIN1Q9UKV3 1341 aaKnown RBP27.51■■□□□ 1.99
PTN-201ENST00000348225 MAPKBP1O60336 1514 aa27.51■■□□□ 1.99
PTN-201ENST00000348225 C9orf84Q5VXU9 1444 aa27.51■■□□□ 1.99
PTN-201ENST00000348225 ANKRD30AQ9BXX3 1397 aa27.5■■□□□ 1.99
PTN-201ENST00000348225 TSPY4P0CV99 314 aa27.5■■□□□ 1.99
PTN-201ENST00000348225 TSPY10P0CW01 314 aa27.5■■□□□ 1.99
PTN-201ENST00000348225 HNRNPMP52272 730 aaKnown RBP eCLIP27.49■■□□□ 1.99
PTN-201ENST00000348225 NCOA1Q15788 1441 aa27.49■■□□□ 1.99
PTN-201ENST00000348225 ABCC1P33527 1531 aa27.47■■□□□ 1.99
PTN-201ENST00000348225 MAST1Q9Y2H9 1570 aa27.45■■□□□ 1.98
PTN-201ENST00000348225 KDM6BO15054 1643 aa27.44■■□□□ 1.98
PTN-201ENST00000348225 FANCAO15360 1455 aa27.42■■□□□ 1.98
PTN-201ENST00000348225 CFAP74Q9C0B2 1584 aa27.39■■□□□ 1.97
PTN-201ENST00000348225 ARHGEF12Q9NZN5 1544 aa27.39■■□□□ 1.97
PTN-201ENST00000348225 CD109Q6YHK3 1445 aa27.36■■□□□ 1.97
PTN-201ENST00000348225 PLXNC1O60486 1568 aa27.34■■□□□ 1.97
PTN-201ENST00000348225 ANKRD50Q9ULJ7 1429 aa27.34■■□□□ 1.97
PTN-201ENST00000348225 TRIM52Q96A61 297 aa27.34■■□□□ 1.97
PTN-201ENST00000348225 KIF15Q9NS87 1388 aa27.33■■□□□ 1.97
PTN-201ENST00000348225 ADGRL1O94910 1474 aa27.31■■□□□ 1.96
PTN-201ENST00000348225 GLI2P10070 1586 aa27.31■■□□□ 1.96
PTN-201ENST00000348225 TRAPPC8Q9Y2L5 1435 aa27.29■■□□□ 1.96
PTN-201ENST00000348225 MAP3K4Q9Y6R4 1608 aa27.27■■□□□ 1.96
PTN-201ENST00000348225 RTEL1-TNFRSF6BF6WH68 1400 aa27.25■■□□□ 1.95
PTN-201ENST00000348225 SCAPERQ9BY12 1400 aa27.25■■□□□ 1.95
PTN-201ENST00000348225 DIP2BQ9P265 1576 aa27.22■■□□□ 1.95
PTN-201ENST00000348225 MPHOSPH9Q99550 1183 aa27.22■■□□□ 1.95
PTN-201ENST00000348225 SPAG9O60271 1321 aaKnown RBP27.22■■□□□ 1.95
PTN-201ENST00000348225 NEO1Q92859 1461 aa27.22■■□□□ 1.95
PTN-201ENST00000348225 ZFYVE16Q7Z3T8 1539 aa27.22■■□□□ 1.95
PTN-201ENST00000348225 DUOX2Q9NRD8 1548 aa27.22■■□□□ 1.95
PTN-201ENST00000348225 INO80Q9ULG1 1556 aaPredicted RBP27.19■■□□□ 1.94
PTN-201ENST00000348225 DENND4BO75064 1496 aaPredicted RBP27.18■■□□□ 1.94
PTN-201ENST00000348225 ZNF518AQ6AHZ1 1483 aa27.18■■□□□ 1.94
PTN-201ENST00000348225 AFAP1Q8N556 730 aa27.17■■□□□ 1.94
PTN-201ENST00000348225 KDM5DQ9BY66 1539 aa27.17■■□□□ 1.94
PTN-201ENST00000348225 ATP7AQ04656 1500 aa27.16■■□□□ 1.94
PTN-201ENST00000348225 ERBINQ96RT1 1412 aa27.16■■□□□ 1.94
PTN-201ENST00000348225 PZPP20742 1482 aa27.16■■□□□ 1.94
PTN-201ENST00000348225 SLC4A1APQ9BWU0 796 aaKnown RBP27.14■■□□□ 1.94
PTN-201ENST00000348225 TIMELESSQ9UNS1 1208 aa27.13■■□□□ 1.93
PTN-201ENST00000348225 POGZQ7Z3K3 1410 aa27.13■■□□□ 1.93
PTN-201ENST00000348225 SIN3AQ96ST3 1273 aa27.12■■□□□ 1.93
PTN-201ENST00000348225 FAM69CQ0P6D2 419 aa27.12■■□□□ 1.93
PTN-201ENST00000348225 UNC13BO14795 1591 aa27.12■■□□□ 1.93
PTN-201ENST00000348225 NUP155O75694 1391 aa27.1■■□□□ 1.93
PTN-201ENST00000348225 NEUROD1Q13562 356 aa27.1■■□□□ 1.93
PTN-201ENST00000348225 KDM5CP41229 1560 aa27.1■■□□□ 1.93
PTN-201ENST00000348225 MYT1LQ9UL68 1186 aa27.05■■□□□ 1.92
PTN-201ENST00000348225 KIDINS220Q9ULH0 1771 aa27.05■■□□□ 1.92
PTN-201ENST00000348225 HECW2Q9P2P5 1572 aa27.04■■□□□ 1.92
PTN-201ENST00000348225 TEX14Q8IWB6 1497 aa27.03■■□□□ 1.92
PTN-201ENST00000348225 MLH3Q9UHC1 1453 aa27.03■■□□□ 1.92
PTN-201ENST00000348225 TONSLQ96HA7 1378 aa27.02■■□□□ 1.92
PTN-201ENST00000348225 MAGI2Q86UL8 1455 aa27.02■■□□□ 1.92
PTN-201ENST00000348225 ANKRD30BQ9BXX2 1392 aa27.01■■□□□ 1.92
PTN-201ENST00000348225 FAM135AQ9P2D6 1515 aa27.01■■□□□ 1.91
PTN-201ENST00000348225 KIF13AQ9H1H9 1805 aa27.01■■□□□ 1.91
PTN-201ENST00000348225 PPRC1Q5VV67 1664 aaKnown RBP27■■□□□ 1.91
PTN-201ENST00000348225 IQGAP3Q86VI3 1631 aa27■■□□□ 1.91
PTN-201ENST00000348225 EIF2AK4Q9P2K8 1649 aaKnown RBP27■■□□□ 1.91
PTN-201ENST00000348225 TSPOAP1O95153 1857 aa27■■□□□ 1.91
PTN-201ENST00000348225 RICTORQ6R327 1708 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms