RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 FAM69CQ0P6D2 419 aa7.95□□□□□ -1.14
VCAM1-202ENST00000347652 FMN1Q68DA7 1419 aa7.95□□□□□ -1.14
VCAM1-202ENST00000347652 ATP10BO94823 1461 aa7.95□□□□□ -1.14
VCAM1-202ENST00000347652 DIP2BQ9P265 1576 aa7.95□□□□□ -1.14
VCAM1-202ENST00000347652 IFNLR1Q8IU57 520 aaPredicted RBP7.94□□□□□ -1.14
VCAM1-202ENST00000347652 BBXQ8WY36 941 aaPredicted RBP7.94□□□□□ -1.14
VCAM1-202ENST00000347652 VPS8Q8N3P4 1428 aa7.94□□□□□ -1.14
VCAM1-202ENST00000347652 ABCC10Q5T3U5 1492 aa7.94□□□□□ -1.14
VCAM1-202ENST00000347652 ATP1B4Q9UN42 357 aaPredicted RBP7.93□□□□□ -1.14
VCAM1-202ENST00000347652 TSPOAP1O95153 1857 aa7.92□□□□□ -1.14
VCAM1-202ENST00000347652 CDK13Q14004 1512 aaKnown RBP7.92□□□□□ -1.14
VCAM1-202ENST00000347652 CASKIN1Q8WXD9 1431 aa7.92□□□□□ -1.14
VCAM1-202ENST00000347652 LRRIQ1Q96JM4 1722 aa7.92□□□□□ -1.14
VCAM1-202ENST00000347652 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.92□□□□□ -1.14
VCAM1-202ENST00000347652 HNRNPUL2Q1KMD3 747 aaKnown RBP7.92□□□□□ -1.14
VCAM1-202ENST00000347652 KCNH8Q96L42 1107 aa7.92□□□□□ -1.14
VCAM1-202ENST00000347652 PCF11O94913 1555 aaKnown RBP7.91□□□□□ -1.14
VCAM1-202ENST00000347652 EPRSP07814 1512 aaKnown RBP7.91□□□□□ -1.14
VCAM1-202ENST00000347652 WDR7Q9Y4E6 1490 aa7.91□□□□□ -1.14
VCAM1-202ENST00000347652 FYCO1Q9BQS8 1478 aa7.9□□□□□ -1.14
VCAM1-202ENST00000347652 FOXD1Q16676 465 aa7.9□□□□□ -1.15
VCAM1-202ENST00000347652 HECW1Q76N89 1606 aa7.89□□□□□ -1.15
VCAM1-202ENST00000347652 PPRC1Q5VV67 1664 aaKnown RBP7.88□□□□□ -1.15
VCAM1-202ENST00000347652 BRPF1P55201 1214 aaPredicted RBP7.87□□□□□ -1.15
VCAM1-202ENST00000347652 NECTIN2Q92692 538 aa7.87□□□□□ -1.15
VCAM1-202ENST00000347652 GLI2P10070 1586 aa7.87□□□□□ -1.15
VCAM1-202ENST00000347652 MAP3K4Q9Y6R4 1608 aa7.86□□□□□ -1.15
VCAM1-202ENST00000347652 MAP3K1Q13233 1512 aa7.86□□□□□ -1.15
VCAM1-202ENST00000347652 CHMP4AQ9BY43 222 aa7.86□□□□□ -1.15
VCAM1-202ENST00000347652 C1orf115Q9H7X2 142 aa7.86□□□□□ -1.15
VCAM1-202ENST00000347652 CCDC18Q5T9S5 1454 aa7.86□□□□□ -1.15
VCAM1-202ENST00000347652 MAGI3Q5TCQ9 1506 aa7.85□□□□□ -1.15
VCAM1-202ENST00000347652 TIAM1Q13009 1591 aa7.84□□□□□ -1.15
VCAM1-202ENST00000347652 PLEKHD1A6NEE1 506 aa7.84□□□□□ -1.15
VCAM1-202ENST00000347652 SPRYD3Q8NCJ5 442 aa7.84□□□□□ -1.15
VCAM1-202ENST00000347652 CFAP43Q8NDM7 1665 aa7.84□□□□□ -1.15
VCAM1-202ENST00000347652 CD109Q6YHK3 1445 aa7.84□□□□□ -1.15
VCAM1-202ENST00000347652 KIF14Q15058 1648 aa7.84□□□□□ -1.15
VCAM1-202ENST00000347652 SLC4A2P04920 1241 aa7.84□□□□□ -1.16
VCAM1-202ENST00000347652 TTC37Q6PGP7 1564 aa7.83□□□□□ -1.16
VCAM1-202ENST00000347652 VASPP50552 380 aaPredicted RBP7.83□□□□□ -1.16
VCAM1-202ENST00000347652 CNKSR2Q8WXI2 1034 aa7.83□□□□□ -1.16
VCAM1-202ENST00000347652 COL17A1Q9UMD9 1497 aaPredicted RBP7.83□□□□□ -1.16
VCAM1-202ENST00000347652 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.83□□□□□ -1.16
VCAM1-202ENST00000347652 ABCA9Q8IUA7 1624 aa7.83□□□□□ -1.16
VCAM1-202ENST00000347652 KANK4Q5T7N3 995 aaPredicted RBP7.82□□□□□ -1.16
VCAM1-202ENST00000347652 LRRC9Q6ZRR7 1453 aa7.81□□□□□ -1.16
VCAM1-202ENST00000347652 CDK11AQ9UQ88 783 aaPredicted RBP7.81□□□□□ -1.16
VCAM1-202ENST00000347652 TROQ12816 1431 aaPredicted RBP7.81□□□□□ -1.16
VCAM1-202ENST00000347652 KDM6BO15054 1643 aa7.8□□□□□ -1.16
VCAM1-202ENST00000347652 SAMD1Q6SPF0 538 aaPredicted RBP7.79□□□□□ -1.16
VCAM1-202ENST00000347652 EHBP1L1Q8N3D4 1523 aa7.79□□□□□ -1.16
VCAM1-202ENST00000347652 MTUS2Q5JR59 1369 aa7.78□□□□□ -1.16
VCAM1-202ENST00000347652 PPARGC1BQ86YN6 1023 aaKnown RBP7.78□□□□□ -1.16
VCAM1-202ENST00000347652 TEX14Q8IWB6 1497 aa7.78□□□□□ -1.16
VCAM1-202ENST00000347652 CCDC9Q9Y3X0 531 aaKnown RBP7.78□□□□□ -1.16
VCAM1-202ENST00000347652 RGL2O15211 777 aa7.77□□□□□ -1.17
VCAM1-202ENST00000347652 ZNF428Q96B54 188 aa7.77□□□□□ -1.17
VCAM1-202ENST00000347652 RAPGEF3O95398 923 aa7.76□□□□□ -1.17
VCAM1-202ENST00000347652 FANCAO15360 1455 aa7.76□□□□□ -1.17
VCAM1-202ENST00000347652 DHX37Q8IY37 1157 aaKnown RBP7.76□□□□□ -1.17
VCAM1-202ENST00000347652 MYO5CQ9NQX4 1742 aa7.76□□□□□ -1.17
VCAM1-202ENST00000347652 CDC42BPBQ9Y5S2 1711 aa7.76□□□□□ -1.17
VCAM1-202ENST00000347652 PLCH2O75038 1416 aa7.75□□□□□ -1.17
VCAM1-202ENST00000347652 SUPT6HQ7KZ85 1726 aaKnown RBP7.75□□□□□ -1.17
VCAM1-202ENST00000347652 CDC42BPAQ5VT25 1732 aa7.75□□□□□ -1.17
VCAM1-202ENST00000347652 ATF5Q9Y2D1 282 aaPredicted RBP7.75□□□□□ -1.17
VCAM1-202ENST00000347652 NCOA2Q15596 1464 aa7.75□□□□□ -1.17
VCAM1-202ENST00000347652 AKNAQ7Z591 1439 aa7.74□□□□□ -1.17
VCAM1-202ENST00000347652 ARHGAP5Q13017 1502 aa7.74□□□□□ -1.17
VCAM1-202ENST00000347652 FRMPD1Q5SYB0 1578 aa7.74□□□□□ -1.17
VCAM1-202ENST00000347652 NEO1Q92859 1461 aa7.73□□□□□ -1.17
VCAM1-202ENST00000347652 GPATCH8Q9UKJ3 1502 aaKnown RBP7.73□□□□□ -1.17
VCAM1-202ENST00000347652 MAPK8IP2Q13387 824 aaPredicted RBP7.73□□□□□ -1.17
VCAM1-202ENST00000347652 PREX2Q70Z35 1606 aa7.73□□□□□ -1.17
VCAM1-202ENST00000347652 ARAP3Q8WWN8 1544 aa7.73□□□□□ -1.17
VCAM1-202ENST00000347652 PHLDB1Q86UU1 1377 aa7.73□□□□□ -1.17
VCAM1-202ENST00000347652 CDK11BP21127 795 aaKnown RBP7.72□□□□□ -1.17
VCAM1-202ENST00000347652 ZNF777Q9ULD5 760 aaPredicted RBP7.72□□□□□ -1.17
VCAM1-202ENST00000347652 ZNF644Q9H582 1327 aaPredicted RBP7.72□□□□□ -1.17
VCAM1-202ENST00000347652 ADGRL1O94910 1474 aa7.72□□□□□ -1.17
VCAM1-202ENST00000347652 ARHGEF12Q9NZN5 1544 aa7.72□□□□□ -1.17
VCAM1-202ENST00000347652 ECM2O94769 699 aaPredicted RBP7.71□□□□□ -1.17
VCAM1-202ENST00000347652 SCAPERQ9BY12 1400 aa7.71□□□□□ -1.17
VCAM1-202ENST00000347652 RICTORQ6R327 1708 aa7.71□□□□□ -1.17
VCAM1-202ENST00000347652 CCNB3Q8WWL7 1395 aa7.71□□□□□ -1.18
VCAM1-202ENST00000347652 EFCAB2Q5VUJ9 269 aa7.71□□□□□ -1.18
VCAM1-202ENST00000347652 POTEDQ86YR6 584 aa7.71□□□□□ -1.18
VCAM1-202ENST00000347652 ATXN8OSP0DMR3 200 aa7.7□□□□□ -1.18
VCAM1-202ENST00000347652 AFAP1Q8N556 730 aa7.7□□□□□ -1.18
VCAM1-202ENST00000347652 SAMD9LQ8IVG5 1584 aa7.7□□□□□ -1.18
VCAM1-202ENST00000347652 CFAP74Q9C0B2 1584 aa7.7□□□□□ -1.18
VCAM1-202ENST00000347652 DENND4BO75064 1496 aaPredicted RBP7.7□□□□□ -1.18
VCAM1-202ENST00000347652 MYOM3Q5VTT5 1437 aa7.7□□□□□ -1.18
VCAM1-202ENST00000347652 PDIA4P13667 645 aaKnown RBP7.69□□□□□ -1.18
VCAM1-202ENST00000347652 NEUROD2Q15784 382 aa7.69□□□□□ -1.18
VCAM1-202ENST00000347652 CFDP1Q9UEE9 299 aaPredicted RBP7.69□□□□□ -1.18
VCAM1-202ENST00000347652 MIA2Q96PC5 1412 aa7.69□□□□□ -1.18
VCAM1-202ENST00000347652 YEATS2Q9ULM3 1422 aa7.69□□□□□ -1.18
VCAM1-202ENST00000347652 TRAPPC8Q9Y2L5 1435 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms