RNA–Protein interactions for RNA: ENST00000346141.10

TUBD1-203, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-203ENST00000346141 CLIP1P30622 1438 aa19.32■□□□□ 0.68
TUBD1-203ENST00000346141 CCDC18Q5T9S5 1454 aa19.32■□□□□ 0.68
TUBD1-203ENST00000346141 KIF14Q15058 1648 aa19.31■□□□□ 0.68
TUBD1-203ENST00000346141 PCF11O94913 1555 aaKnown RBP19.31■□□□□ 0.68
TUBD1-203ENST00000346141 RICTORQ6R327 1708 aa19.3■□□□□ 0.68
TUBD1-203ENST00000346141 LRRIQ1Q96JM4 1722 aa19.28■□□□□ 0.68
TUBD1-203ENST00000346141 FYCO1Q9BQS8 1478 aa19.28■□□□□ 0.68
TUBD1-203ENST00000346141 MYO5CQ9NQX4 1742 aa19.27■□□□□ 0.68
TUBD1-203ENST00000346141 EFCAB2Q5VUJ9 269 aa19.27■□□□□ 0.67
TUBD1-203ENST00000346141 ZMYM4Q5VZL5 1548 aa19.27■□□□□ 0.67
TUBD1-203ENST00000346141 ARHGEF40Q8TER5 1519 aa19.27■□□□□ 0.67
TUBD1-203ENST00000346141 SCAPERQ9BY12 1400 aa19.25■□□□□ 0.67
TUBD1-203ENST00000346141 POGZQ7Z3K3 1410 aa19.24■□□□□ 0.67
TUBD1-203ENST00000346141 MAGI2Q86UL8 1455 aa19.24■□□□□ 0.67
TUBD1-203ENST00000346141 ARID4BQ4LE39 1312 aaPredicted RBP19.22■□□□□ 0.67
TUBD1-203ENST00000346141 ZFYVE16Q7Z3T8 1539 aa19.22■□□□□ 0.67
TUBD1-203ENST00000346141 ARHGAP5Q13017 1502 aa19.21■□□□□ 0.67
TUBD1-203ENST00000346141 ADAMTSL3P82987 1691 aa19.21■□□□□ 0.67
TUBD1-203ENST00000346141 YEATS2Q9ULM3 1422 aa19.18■□□□□ 0.66
TUBD1-203ENST00000346141 BCORL1Q5H9F3 1711 aa19.18■□□□□ 0.66
TUBD1-203ENST00000346141 ZNF518AQ6AHZ1 1483 aa19.17■□□□□ 0.66
TUBD1-203ENST00000346141 PTPRMP28827 1452 aa19.16■□□□□ 0.66
TUBD1-203ENST00000346141 CNKSR2Q8WXI2 1034 aa19.15■□□□□ 0.66
TUBD1-203ENST00000346141 PREX2Q70Z35 1606 aa19.15■□□□□ 0.66
TUBD1-203ENST00000346141 HECW2Q9P2P5 1572 aa19.15■□□□□ 0.66
TUBD1-203ENST00000346141 CEP162Q5TB80 1403 aa19.13■□□□□ 0.65
TUBD1-203ENST00000346141 CDC42BPBQ9Y5S2 1711 aa19.13■□□□□ 0.65
TUBD1-203ENST00000346141 MADDQ8WXG6 1647 aa19.13■□□□□ 0.65
TUBD1-203ENST00000346141 KDM5CP41229 1560 aa19.12■□□□□ 0.65
TUBD1-203ENST00000346141 ATP10AO60312 1499 aa19.11■□□□□ 0.65
TUBD1-203ENST00000346141 C9orf84Q5VXU9 1444 aa19.1■□□□□ 0.65
TUBD1-203ENST00000346141 AFAP1Q8N556 730 aa19.09■□□□□ 0.65
TUBD1-203ENST00000346141 ABCC1P33527 1531 aa19.09■□□□□ 0.65
TUBD1-203ENST00000346141 CDC42BPAQ5VT25 1732 aa19.07■□□□□ 0.64
TUBD1-203ENST00000346141 SIGLEC1Q9BZZ2 1709 aa19.07■□□□□ 0.64
TUBD1-203ENST00000346141 MTUS2Q5JR59 1369 aa19.07■□□□□ 0.64
TUBD1-203ENST00000346141 GPATCH8Q9UKJ3 1502 aaKnown RBP19.06■□□□□ 0.64
TUBD1-203ENST00000346141 MLH3Q9UHC1 1453 aa19.05■□□□□ 0.64
TUBD1-203ENST00000346141 ARHGEF12Q9NZN5 1544 aa19.05■□□□□ 0.64
TUBD1-203ENST00000346141 RIMS1Q86UR5 1692 aaKnown RBP19.05■□□□□ 0.64
TUBD1-203ENST00000346141 MYT1LQ9UL68 1186 aa19.04■□□□□ 0.64
TUBD1-203ENST00000346141 TRAPPC8Q9Y2L5 1435 aa19.04■□□□□ 0.64
TUBD1-203ENST00000346141 ITSN2Q9NZM3 1697 aa19.04■□□□□ 0.64
TUBD1-203ENST00000346141 NCBP3Q53F19 620 aaKnown RBP19.03■□□□□ 0.64
TUBD1-203ENST00000346141 CCNB3Q8WWL7 1395 aa19.03■□□□□ 0.64
TUBD1-203ENST00000346141 MLECQ14165 292 aa19.03■□□□□ 0.64
TUBD1-203ENST00000346141 ZNF777Q9ULD5 760 aaPredicted RBP19.02■□□□□ 0.63
TUBD1-203ENST00000346141 EHBP1L1Q8N3D4 1523 aa19.01■□□□□ 0.63
TUBD1-203ENST00000346141 DIP2CQ9Y2E4 1556 aa19.01■□□□□ 0.63
TUBD1-203ENST00000346141 CFDP1Q9UEE9 299 aaPredicted RBP19.01■□□□□ 0.63
TUBD1-203ENST00000346141 REREQ9P2R6 1566 aa19.01■□□□□ 0.63
TUBD1-203ENST00000346141 SAMD9LQ8IVG5 1584 aa19■□□□□ 0.63
TUBD1-203ENST00000346141 PLEKHH2Q8IVE3 1493 aa18.99■□□□□ 0.63
TUBD1-203ENST00000346141 KIAA1107Q9UPP5 1409 aa18.99■□□□□ 0.63
TUBD1-203ENST00000346141 ABCA6Q8N139 1617 aa18.98■□□□□ 0.63
TUBD1-203ENST00000346141 FER1L4A9Z1Z3 1794 aa18.98■□□□□ 0.63
TUBD1-203ENST00000346141 SYCP2Q9BX26 1530 aa18.98■□□□□ 0.63
TUBD1-203ENST00000346141 LOC105371045A0A1W2PR82 267 aa18.97■□□□□ 0.63
TUBD1-203ENST00000346141 AGLP35573 1532 aa18.95■□□□□ 0.62
TUBD1-203ENST00000346141 LMTK3Q96Q04 1460 aa18.95■□□□□ 0.62
TUBD1-203ENST00000346141 KIDINS220Q9ULH0 1771 aa18.94■□□□□ 0.62
TUBD1-203ENST00000346141 TIAM1Q13009 1591 aa18.94■□□□□ 0.62
TUBD1-203ENST00000346141 VPS8Q8N3P4 1428 aa18.94■□□□□ 0.62
TUBD1-203ENST00000346141 HNRNPMP52272 730 aaKnown RBP eCLIP18.94■□□□□ 0.62
TUBD1-203ENST00000346141 SPAG9O60271 1321 aaKnown RBP18.93■□□□□ 0.62
TUBD1-203ENST00000346141 KCNA4P22459 653 aa18.93■□□□□ 0.62
TUBD1-203ENST00000346141 ATP7AQ04656 1500 aa18.89■□□□□ 0.61
TUBD1-203ENST00000346141 SUPT6HQ7KZ85 1726 aaKnown RBP18.89■□□□□ 0.61
TUBD1-203ENST00000346141 NCOA2Q15596 1464 aa18.88■□□□□ 0.61
TUBD1-203ENST00000346141 INO80Q9ULG1 1556 aaPredicted RBP18.87■□□□□ 0.61
TUBD1-203ENST00000346141 ZNF644Q9H582 1327 aaPredicted RBP18.86■□□□□ 0.61
TUBD1-203ENST00000346141 ESF1Q9H501 851 aaKnown RBP18.86■□□□□ 0.61
TUBD1-203ENST00000346141 MBD5Q9P267 1494 aa18.85■□□□□ 0.61
TUBD1-203ENST00000346141 CEBPAP49715 358 aaPredicted RBP18.84■□□□□ 0.61
TUBD1-203ENST00000346141 LRRC9Q6ZRR7 1453 aa18.84■□□□□ 0.61
TUBD1-203ENST00000346141 MAP3K1Q13233 1512 aa18.83■□□□□ 0.61
TUBD1-203ENST00000346141 CNTLNQ9NXG0 1405 aa18.83■□□□□ 0.61
TUBD1-203ENST00000346141 HOXD11P31277 338 aaPredicted RBP18.83■□□□□ 0.6
TUBD1-203ENST00000346141 RNF216Q9NWF9 866 aaPredicted RBP18.83■□□□□ 0.6
TUBD1-203ENST00000346141 A2MP01023 1474 aa18.82■□□□□ 0.6
TUBD1-203ENST00000346141 HSPA2P54652 639 aa18.82■□□□□ 0.6
TUBD1-203ENST00000346141 PLXNC1O60486 1568 aa18.82■□□□□ 0.6
TUBD1-203ENST00000346141 RTEL1-TNFRSF6BF6WH68 1400 aa18.81■□□□□ 0.6
TUBD1-203ENST00000346141 PREX1Q8TCU6 1659 aa18.81■□□□□ 0.6
TUBD1-203ENST00000346141 NPM3O75607 178 aaKnown RBP18.8■□□□□ 0.6
TUBD1-203ENST00000346141 RSPH4AQ5TD94 716 aa18.8■□□□□ 0.6
TUBD1-203ENST00000346141 CAMSAP2Q08AD1 1489 aa18.8■□□□□ 0.6
TUBD1-203ENST00000346141 CCDC141Q6ZP82 1450 aa18.79■□□□□ 0.6
TUBD1-203ENST00000346141 ILDR1Q86SU0 546 aaPredicted RBP18.78■□□□□ 0.6
TUBD1-203ENST00000346141 ADGBQ8N7X0 1667 aa18.78■□□□□ 0.6
TUBD1-203ENST00000346141 UHRF1BP1Q6BDS2 1440 aa18.78■□□□□ 0.6
TUBD1-203ENST00000346141 SETD1BQ9UPS6 1966 aaKnown RBP18.78■□□□□ 0.6
TUBD1-203ENST00000346141 C3P01024 1663 aa18.77■□□□□ 0.6
TUBD1-203ENST00000346141 KANK4Q5T7N3 995 aaPredicted RBP18.75■□□□□ 0.59
TUBD1-203ENST00000346141 ARHGEF5Q12774 1597 aa18.74■□□□□ 0.59
TUBD1-203ENST00000346141 MROH2AA6NES4 1674 aa18.74■□□□□ 0.59
TUBD1-203ENST00000346141 ZMYM3Q14202 1370 aa18.72■□□□□ 0.59
TUBD1-203ENST00000346141 DHX29Q7Z478 1369 aaKnown RBP18.72■□□□□ 0.59
TUBD1-203ENST00000346141 APLP2Q06481 763 aa18.72■□□□□ 0.59
TUBD1-203ENST00000346141 NPATQ14207 1427 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms