RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 ARID3AQ99856 593 aa22.15■■□□□ 1.14
SPAST-202ENST00000345662 BAZ1AQ9NRL2 1556 aaPredicted RBP22.15■■□□□ 1.14
SPAST-202ENST00000345662 PDE4AP27815 886 aa22.15■■□□□ 1.14
SPAST-202ENST00000345662 PDE3BQ13370 1112 aa22.15■■□□□ 1.14
SPAST-202ENST00000345662 CHMP7Q8WUX9 453 aaPredicted RBP22.15■■□□□ 1.14
SPAST-202ENST00000345662 NPM1P06748 294 aaKnown RBP eCLIP22.14■■□□□ 1.13
SPAST-202ENST00000345662 DHX57Q6P158 1386 aaKnown RBP22.13■■□□□ 1.13
SPAST-202ENST00000345662 MCCP23508 829 aa22.13■■□□□ 1.13
SPAST-202ENST00000345662 NACADO15069 1562 aa22.13■■□□□ 1.13
SPAST-202ENST00000345662 U2SURPO15042 1029 aaKnown RBP22.12■■□□□ 1.13
SPAST-202ENST00000345662 AMER1Q5JTC6 1135 aaPredicted RBP22.11■■□□□ 1.13
SPAST-202ENST00000345662 DRC7Q8IY82 874 aa22.11■■□□□ 1.13
SPAST-202ENST00000345662 VSIG10Q8N0Z9 540 aa22.11■■□□□ 1.13
SPAST-202ENST00000345662 PMFBP1Q8TBY8 1022 aa22.1■■□□□ 1.13
SPAST-202ENST00000345662 CECR2Q9BXF3 1484 aa22.08■■□□□ 1.13
SPAST-202ENST00000345662 ZBTB7CA1YPR0 619 aa22.07■■□□□ 1.12
SPAST-202ENST00000345662 ZBED9Q6R2W3 1325 aa22.06■■□□□ 1.12
SPAST-202ENST00000345662 CCDC88BA6NC98 1476 aa22.06■■□□□ 1.12
SPAST-202ENST00000345662 KCNJ4P48050 445 aa22.05■■□□□ 1.12
SPAST-202ENST00000345662 MFAP1P55081 439 aaKnown RBP22.05■■□□□ 1.12
SPAST-202ENST00000345662 SYAP1Q96A49 352 aaPredicted RBP22.05■■□□□ 1.12
SPAST-202ENST00000345662 IPO8O15397 1037 aaKnown RBP22.05■■□□□ 1.12
SPAST-202ENST00000345662 SENP3Q9H4L4 574 aaPredicted RBP22.05■■□□□ 1.12
SPAST-202ENST00000345662 FGD1P98174 961 aa22.04■■□□□ 1.12
SPAST-202ENST00000345662 FOXD1Q16676 465 aa22.04■■□□□ 1.12
SPAST-202ENST00000345662 MPHOSPH9Q99550 1183 aa22.04■■□□□ 1.12
SPAST-202ENST00000345662 FAM161AQ3B820 660 aa22.03■■□□□ 1.12
SPAST-202ENST00000345662 CALD1Q05682 793 aaKnown RBP22.02■■□□□ 1.12
SPAST-202ENST00000345662 MORC1Q86VD1 984 aa22.02■■□□□ 1.12
SPAST-202ENST00000345662 NLRP13Q86W25 1043 aa22.02■■□□□ 1.12
SPAST-202ENST00000345662 CARMIL1Q5VZK9 1371 aa22.02■■□□□ 1.12
SPAST-202ENST00000345662 GOLGA2Q08379 1002 aa22.02■■□□□ 1.12
SPAST-202ENST00000345662 SLC4A3P48751 1232 aa22.01■■□□□ 1.11
SPAST-202ENST00000345662 ABCC8Q09428 1581 aa22.01■■□□□ 1.11
SPAST-202ENST00000345662 DDX11L8A8MPP1 907 aa22.01■■□□□ 1.11
SPAST-202ENST00000345662 CENPQQ7L2Z9 268 aaPredicted RBP22■■□□□ 1.11
SPAST-202ENST00000345662 PKD2Q13563 968 aa21.99■■□□□ 1.11
SPAST-202ENST00000345662 OS9Q13438 667 aaPredicted RBP21.99■■□□□ 1.11
SPAST-202ENST00000345662 FMN1Q68DA7 1419 aa21.99■■□□□ 1.11
SPAST-202ENST00000345662 L3MBTL2Q969R5 705 aa21.98■■□□□ 1.11
SPAST-202ENST00000345662 ROCK2O75116 1388 aaKnown RBP21.97■■□□□ 1.11
SPAST-202ENST00000345662 ITPRIPQ8IWB1 547 aa21.97■■□□□ 1.11
SPAST-202ENST00000345662 PRKRIP1Q9H875 184 aaPredicted RBP21.97■■□□□ 1.11
SPAST-202ENST00000345662 RRP1P56182 461 aaKnown RBP21.96■■□□□ 1.11
SPAST-202ENST00000345662 EXOC6Q8TAG9 804 aa21.96■■□□□ 1.11
SPAST-202ENST00000345662 HAP1P54257 671 aaPredicted RBP21.94■■□□□ 1.1
SPAST-202ENST00000345662 PHLDB1Q86UU1 1377 aa21.92■■□□□ 1.1
SPAST-202ENST00000345662 TNNT3P45378 269 aaPredicted RBP21.92■■□□□ 1.1
SPAST-202ENST00000345662 POGKQ9P215 609 aa21.92■■□□□ 1.1
SPAST-202ENST00000345662 C14orf37Q86TY3 774 aa21.92■■□□□ 1.1
SPAST-202ENST00000345662 CUX2O14529 1486 aa21.9■■□□□ 1.1
SPAST-202ENST00000345662 PLPPR3Q6T4P5 718 aa21.9■■□□□ 1.1
SPAST-202ENST00000345662 NAP1L2Q9ULW6 460 aaPredicted RBP21.9■■□□□ 1.1
SPAST-202ENST00000345662 CENPJQ9HC77 1338 aaPredicted RBP21.89■■□□□ 1.1
SPAST-202ENST00000345662 MYBBP1AQ9BQG0 1328 aaKnown RBP21.89■■□□□ 1.1
SPAST-202ENST00000345662 SKOR2Q2VWA4 1001 aaPredicted RBP21.89■■□□□ 1.09
SPAST-202ENST00000345662 KIF15Q9NS87 1388 aa21.89■■□□□ 1.09
SPAST-202ENST00000345662 APBB1O00213 710 aa21.87■■□□□ 1.09
SPAST-202ENST00000345662 FOXD4L1Q9NU39 408 aa21.87■■□□□ 1.09
SPAST-202ENST00000345662 KIAA1211Q6ZU35 1233 aa21.86■■□□□ 1.09
SPAST-202ENST00000345662 TAOK2Q9UL54 1235 aa21.85■■□□□ 1.09
SPAST-202ENST00000345662 MROH2BQ7Z745 1585 aa21.85■■□□□ 1.09
SPAST-202ENST00000345662 U2AF1L5P0DN76 240 aaPredicted RBP21.85■■□□□ 1.09
SPAST-202ENST00000345662 U2AF1Q01081 240 aaKnown RBP eCLIP21.85■■□□□ 1.09
SPAST-202ENST00000345662 PLIN1O60240 522 aa21.84■■□□□ 1.09
SPAST-202ENST00000345662 CLUAP1Q96AJ1 413 aa21.84■■□□□ 1.09
SPAST-202ENST00000345662 CRBNQ96SW2 442 aa21.84■■□□□ 1.09
SPAST-202ENST00000345662 PHF14O94880 888 aa21.84■■□□□ 1.09
SPAST-202ENST00000345662 SMC4Q9NTJ3 1288 aa21.84■■□□□ 1.09
SPAST-202ENST00000345662 DDX49Q9Y6V7 483 aaKnown RBP21.83■■□□□ 1.09
SPAST-202ENST00000345662 HTATSF1O43719 755 aaKnown RBP21.82■■□□□ 1.08
SPAST-202ENST00000345662 NFKBIBQ15653 356 aa21.81■■□□□ 1.08
SPAST-202ENST00000345662 CCDC146Q8IYE0 955 aa21.79■■□□□ 1.08
SPAST-202ENST00000345662 ST18O60284 1047 aa21.79■■□□□ 1.08
SPAST-202ENST00000345662 CSPP1Q1MSJ5 1256 aa21.79■■□□□ 1.08
SPAST-202ENST00000345662 ANO8Q9HCE9 1232 aaPredicted RBP21.77■■□□□ 1.08
SPAST-202ENST00000345662 NUP155O75694 1391 aa21.77■■□□□ 1.08
SPAST-202ENST00000345662 SRPK2P78362 688 aaKnown RBP21.77■■□□□ 1.07
SPAST-202ENST00000345662 PLEKHG5O94827 1062 aa21.76■■□□□ 1.07
SPAST-202ENST00000345662 CGNL1Q0VF96 1302 aa21.75■■□□□ 1.07
SPAST-202ENST00000345662 CHMP5Q9NZZ3 219 aa21.74■■□□□ 1.07
SPAST-202ENST00000345662 FAM43AQ8N2R8 423 aa21.74■■□□□ 1.07
SPAST-202ENST00000345662 KANK1Q14678 1352 aa21.74■■□□□ 1.07
SPAST-202ENST00000345662 FAM13BQ9NYF5 915 aa21.72■■□□□ 1.07
SPAST-202ENST00000345662 EIF4G1Q04637 1599 aaKnown RBP21.72■■□□□ 1.07
SPAST-202ENST00000345662 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.72■■□□□ 1.07
SPAST-202ENST00000345662 TPM4P67936 248 aa21.71■■□□□ 1.07
SPAST-202ENST00000345662 ANKRD30AQ9BXX3 1397 aa21.7■■□□□ 1.06
SPAST-202ENST00000345662 IL27Q8NEV9 243 aa21.7■■□□□ 1.06
SPAST-202ENST00000345662 RAPGEF2Q9Y4G8 1499 aa21.7■■□□□ 1.06
SPAST-202ENST00000345662 HMMRO75330 724 aa21.69■■□□□ 1.06
SPAST-202ENST00000345662 E9PSI1 815 aa21.68■■□□□ 1.06
SPAST-202ENST00000345662 ST20-MTHFSA0A0A6YYL1 179 aa21.68■■□□□ 1.06
SPAST-202ENST00000345662 RTF1Q92541 710 aaKnown RBP21.68■■□□□ 1.06
SPAST-202ENST00000345662 BRPF3Q9ULD4 1205 aa21.68■■□□□ 1.06
SPAST-202ENST00000345662 EIF3AQ14152 1382 aaKnown RBP21.67■■□□□ 1.06
SPAST-202ENST00000345662 GNL2Q13823 731 aaKnown RBP21.66■■□□□ 1.06
SPAST-202ENST00000345662 NOL8Q76FK4 1167 aaKnown RBP21.66■■□□□ 1.06
SPAST-202ENST00000345662 A0A0G2JS52 829 aa21.66■■□□□ 1.06
SPAST-202ENST00000345662 FOXD4L5Q5VV16 416 aaPredicted RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms