RNA–Protein interactions for RNA: ENST00000344935.8

CPSF4L-201, Transcript of cleavage and polyadenylation specific factor 4 like, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPSF4L, Length 647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4L-201ENST00000344935 PREX1Q8TCU6 1659 aa13.78□□□□□ -0.2
CPSF4L-201ENST00000344935 LRRIQ1Q96JM4 1722 aa13.76□□□□□ -0.21
CPSF4L-201ENST00000344935 ZNF518AQ6AHZ1 1483 aa13.76□□□□□ -0.21
CPSF4L-201ENST00000344935 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.76□□□□□ -0.21
CPSF4L-201ENST00000344935 HNRNPUL2Q1KMD3 747 aaKnown RBP13.76□□□□□ -0.21
CPSF4L-201ENST00000344935 ARHGAP35Q9NRY4 1499 aa13.75□□□□□ -0.21
CPSF4L-201ENST00000344935 C9orf84Q5VXU9 1444 aa13.75□□□□□ -0.21
CPSF4L-201ENST00000344935 ATP10AO60312 1499 aa13.74□□□□□ -0.21
CPSF4L-201ENST00000344935 SCAPERQ9BY12 1400 aa13.73□□□□□ -0.21
CPSF4L-201ENST00000344935 PREX2Q70Z35 1606 aa13.73□□□□□ -0.21
CPSF4L-201ENST00000344935 TROQ12816 1431 aaPredicted RBP13.73□□□□□ -0.21
CPSF4L-201ENST00000344935 ARID4BQ4LE39 1312 aaPredicted RBP13.72□□□□□ -0.21
CPSF4L-201ENST00000344935 DIP2CQ9Y2E4 1556 aa13.71□□□□□ -0.21
CPSF4L-201ENST00000344935 CDC42BPBQ9Y5S2 1711 aa13.71□□□□□ -0.21
CPSF4L-201ENST00000344935 CLIP1P30622 1438 aa13.7□□□□□ -0.22
CPSF4L-201ENST00000344935 AGLP35573 1532 aa13.69□□□□□ -0.22
CPSF4L-201ENST00000344935 SETD1BQ9UPS6 1966 aaKnown RBP13.69□□□□□ -0.22
CPSF4L-201ENST00000344935 CCDC18Q5T9S5 1454 aa13.69□□□□□ -0.22
CPSF4L-201ENST00000344935 ABCC1P33527 1531 aa13.69□□□□□ -0.22
CPSF4L-201ENST00000344935 ITSN2Q9NZM3 1697 aa13.69□□□□□ -0.22
CPSF4L-201ENST00000344935 ABCA6Q8N139 1617 aa13.68□□□□□ -0.22
CPSF4L-201ENST00000344935 MLH3Q9UHC1 1453 aa13.68□□□□□ -0.22
CPSF4L-201ENST00000344935 CDK11AQ9UQ88 783 aaPredicted RBP13.68□□□□□ -0.22
CPSF4L-201ENST00000344935 ARHGAP5Q13017 1502 aa13.68□□□□□ -0.22
CPSF4L-201ENST00000344935 EFCAB2Q5VUJ9 269 aa13.67□□□□□ -0.22
CPSF4L-201ENST00000344935 CDC42BPAQ5VT25 1732 aa13.65□□□□□ -0.22
CPSF4L-201ENST00000344935 STRCQ7RTU9 1775 aa13.65□□□□□ -0.22
CPSF4L-201ENST00000344935 MROH2AA6NES4 1674 aa13.64□□□□□ -0.23
CPSF4L-201ENST00000344935 C3P01024 1663 aa13.64□□□□□ -0.23
CPSF4L-201ENST00000344935 CASKIN1Q8WXD9 1431 aa13.64□□□□□ -0.23
CPSF4L-201ENST00000344935 FYCO1Q9BQS8 1478 aa13.63□□□□□ -0.23
CPSF4L-201ENST00000344935 KIDINS220Q9ULH0 1771 aa13.63□□□□□ -0.23
CPSF4L-201ENST00000344935 RANGAP1P46060 587 aaPredicted RBP13.62□□□□□ -0.23
CPSF4L-201ENST00000344935 UHRF1BP1Q6BDS2 1440 aa13.6□□□□□ -0.23
CPSF4L-201ENST00000344935 CNTLNQ9NXG0 1405 aa13.59□□□□□ -0.23
CPSF4L-201ENST00000344935 PLXNC1O60486 1568 aa13.58□□□□□ -0.24
CPSF4L-201ENST00000344935 SAMD9LQ8IVG5 1584 aa13.58□□□□□ -0.24
CPSF4L-201ENST00000344935 INO80Q9ULG1 1556 aaPredicted RBP13.58□□□□□ -0.24
CPSF4L-201ENST00000344935 UBTFP17480 764 aaKnown RBP13.57□□□□□ -0.24
CPSF4L-201ENST00000344935 HSPA2P54652 639 aa13.57□□□□□ -0.24
CPSF4L-201ENST00000344935 ZNF142P52746 1687 aaPredicted RBP13.56□□□□□ -0.24
CPSF4L-201ENST00000344935 PTPRTO14522 1441 aa13.56□□□□□ -0.24
CPSF4L-201ENST00000344935 IQSEC2Q5JU85 1478 aa13.56□□□□□ -0.24
CPSF4L-201ENST00000344935 NPATQ14207 1427 aa13.56□□□□□ -0.24
CPSF4L-201ENST00000344935 TRAPPC8Q9Y2L5 1435 aa13.56□□□□□ -0.24
CPSF4L-201ENST00000344935 CERKQ8TCT0 537 aa13.54□□□□□ -0.24
CPSF4L-201ENST00000344935 DMRT2Q9Y5R5 561 aa13.54□□□□□ -0.24
CPSF4L-201ENST00000344935 AFAP1Q8N556 730 aa13.53□□□□□ -0.24
CPSF4L-201ENST00000344935 KIAA1107Q9UPP5 1409 aa13.53□□□□□ -0.24
CPSF4L-201ENST00000344935 PLEKHH2Q8IVE3 1493 aa13.53□□□□□ -0.24
CPSF4L-201ENST00000344935 SYCP2Q9BX26 1530 aa13.53□□□□□ -0.24
CPSF4L-201ENST00000344935 MLECQ14165 292 aa13.52□□□□□ -0.25
CPSF4L-201ENST00000344935 ATP7AQ04656 1500 aa13.52□□□□□ -0.25
CPSF4L-201ENST00000344935 ADGBQ8N7X0 1667 aa13.51□□□□□ -0.25
CPSF4L-201ENST00000344935 NCOA1Q15788 1441 aa13.51□□□□□ -0.25
CPSF4L-201ENST00000344935 CHIC1Q5VXU3 224 aa13.51□□□□□ -0.25
CPSF4L-201ENST00000344935 LTBP4Q8N2S1 1624 aa13.5□□□□□ -0.25
CPSF4L-201ENST00000344935 GPATCH8Q9UKJ3 1502 aaKnown RBP13.5□□□□□ -0.25
CPSF4L-201ENST00000344935 MYO3AQ8NEV4 1616 aa13.5□□□□□ -0.25
CPSF4L-201ENST00000344935 FAM135AQ9P2D6 1515 aa13.49□□□□□ -0.25
CPSF4L-201ENST00000344935 PLA2R1Q13018 1463 aa13.48□□□□□ -0.25
CPSF4L-201ENST00000344935 ATP1B4Q9UN42 357 aaPredicted RBP13.47□□□□□ -0.25
CPSF4L-201ENST00000344935 SUPT6HQ7KZ85 1726 aaKnown RBP13.47□□□□□ -0.25
CPSF4L-201ENST00000344935 CEBPAP49715 358 aaPredicted RBP13.46□□□□□ -0.25
CPSF4L-201ENST00000344935 CLTCQ00610 1675 aaKnown RBP13.46□□□□□ -0.26
CPSF4L-201ENST00000344935 TIAM1Q13009 1591 aa13.45□□□□□ -0.26
CPSF4L-201ENST00000344935 EHBP1L1Q8N3D4 1523 aa13.45□□□□□ -0.26
CPSF4L-201ENST00000344935 CAMSAP1Q5T5Y3 1602 aa13.44□□□□□ -0.26
CPSF4L-201ENST00000344935 CEP170BQ9Y4F5 1589 aaPredicted RBP13.44□□□□□ -0.26
CPSF4L-201ENST00000344935 A2MP01023 1474 aa13.43□□□□□ -0.26
CPSF4L-201ENST00000344935 TCOF1Q13428 1488 aaKnown RBP13.43□□□□□ -0.26
CPSF4L-201ENST00000344935 PLPPR3Q6T4P5 718 aa13.42□□□□□ -0.26
CPSF4L-201ENST00000344935 RTEL1-TNFRSF6BF6WH68 1400 aa13.41□□□□□ -0.26
CPSF4L-201ENST00000344935 SPATA31D1Q6ZQQ2 1576 aa13.41□□□□□ -0.26
CPSF4L-201ENST00000344935 SPAG9O60271 1321 aaKnown RBP13.4□□□□□ -0.26
CPSF4L-201ENST00000344935 PTPRKQ15262 1439 aa13.4□□□□□ -0.26
CPSF4L-201ENST00000344935 ESF1Q9H501 851 aaKnown RBP13.4□□□□□ -0.26
CPSF4L-201ENST00000344935 PPP6R1Q9UPN7 881 aa13.4□□□□□ -0.26
CPSF4L-201ENST00000344935 MBD5Q9P267 1494 aa13.4□□□□□ -0.26
CPSF4L-201ENST00000344935 CEP162Q5TB80 1403 aa13.39□□□□□ -0.27
CPSF4L-201ENST00000344935 POLR1AO95602 1720 aaPredicted RBP13.39□□□□□ -0.27
CPSF4L-201ENST00000344935 ZMYM3Q14202 1370 aa13.39□□□□□ -0.27
CPSF4L-201ENST00000344935 CCNB3Q8WWL7 1395 aa13.39□□□□□ -0.27
CPSF4L-201ENST00000344935 MYT1LQ9UL68 1186 aa13.38□□□□□ -0.27
CPSF4L-201ENST00000344935 MTUS2Q5JR59 1369 aa13.36□□□□□ -0.27
CPSF4L-201ENST00000344935 KDM5DQ9BY66 1539 aa13.36□□□□□ -0.27
CPSF4L-201ENST00000344935 A2ML1A8K2U0 1454 aa13.36□□□□□ -0.27
CPSF4L-201ENST00000344935 DNMT1P26358 1616 aaKnown RBP13.35□□□□□ -0.27
CPSF4L-201ENST00000344935 CFDP1Q9UEE9 299 aaPredicted RBP13.35□□□□□ -0.27
CPSF4L-201ENST00000344935 ARHGEF5Q12774 1597 aa13.35□□□□□ -0.27
CPSF4L-201ENST00000344935 PKD2Q13563 968 aa13.34□□□□□ -0.27
CPSF4L-201ENST00000344935 EHMT2Q96KQ7 1210 aa13.34□□□□□ -0.27
CPSF4L-201ENST00000344935 CCDC141Q6ZP82 1450 aa13.34□□□□□ -0.27
CPSF4L-201ENST00000344935 ZC3H13Q5T200 1668 aaKnown RBP13.34□□□□□ -0.27
CPSF4L-201ENST00000344935 PZPP20742 1482 aa13.33□□□□□ -0.28
CPSF4L-201ENST00000344935 NEURL4Q96JN8 1562 aa13.32□□□□□ -0.28
CPSF4L-201ENST00000344935 DEPDC5O75140 1603 aa13.32□□□□□ -0.28
CPSF4L-201ENST00000344935 RNF17Q9BXT8 1623 aaKnown RBP13.32□□□□□ -0.28
CPSF4L-201ENST00000344935 HNRNPMP52272 730 aaKnown RBP eCLIP13.31□□□□□ -0.28
CPSF4L-201ENST00000344935 MAST1Q9Y2H9 1570 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms