RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 SPAG9O60271 1321 aaKnown RBP12.13□□□□□ -0.47
HMGCR-202ENST00000343975 PLCH2O75038 1416 aa12.12□□□□□ -0.47
HMGCR-202ENST00000343975 FGD6Q6ZV73 1430 aa12.12□□□□□ -0.47
HMGCR-202ENST00000343975 FANCAO15360 1455 aa12.11□□□□□ -0.47
HMGCR-202ENST00000343975 ARID4BQ4LE39 1312 aaPredicted RBP12.1□□□□□ -0.47
HMGCR-202ENST00000343975 SCAPERQ9BY12 1400 aa12.09□□□□□ -0.47
HMGCR-202ENST00000343975 GPATCH8Q9UKJ3 1502 aaKnown RBP12.08□□□□□ -0.48
HMGCR-202ENST00000343975 ADGRL1O94910 1474 aa12.08□□□□□ -0.48
HMGCR-202ENST00000343975 AKNAQ7Z591 1439 aa12.08□□□□□ -0.48
HMGCR-202ENST00000343975 TRIM52Q96A61 297 aa12.07□□□□□ -0.48
HMGCR-202ENST00000343975 ITSN2Q9NZM3 1697 aa12.07□□□□□ -0.48
HMGCR-202ENST00000343975 ACIN1Q9UKV3 1341 aaKnown RBP12.07□□□□□ -0.48
HMGCR-202ENST00000343975 DENND4BO75064 1496 aaPredicted RBP12.06□□□□□ -0.48
HMGCR-202ENST00000343975 ANKRD30AQ9BXX3 1397 aa12.06□□□□□ -0.48
HMGCR-202ENST00000343975 ZNF644Q9H582 1327 aaPredicted RBP12.06□□□□□ -0.48
HMGCR-202ENST00000343975 NEO1Q92859 1461 aa12.06□□□□□ -0.48
HMGCR-202ENST00000343975 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.06□□□□□ -0.483e-9■□□□□ 10.4
HMGCR-202ENST00000343975 AFAP1Q8N556 730 aa12.05□□□□□ -0.48
HMGCR-202ENST00000343975 RRP7BPQ9NSQ0 103 aa12.05□□□□□ -0.48
HMGCR-202ENST00000343975 MAGI3Q5TCQ9 1506 aa12.04□□□□□ -0.48
HMGCR-202ENST00000343975 RAPGEF3O95398 923 aa12.04□□□□□ -0.48
HMGCR-202ENST00000343975 CFAP74Q9C0B2 1584 aa12.03□□□□□ -0.48
HMGCR-202ENST00000343975 GLI2P10070 1586 aa12.03□□□□□ -0.48
HMGCR-202ENST00000343975 MYO5CQ9NQX4 1742 aa12.02□□□□□ -0.48
HMGCR-202ENST00000343975 DIP2BQ9P265 1576 aa12.02□□□□□ -0.49
HMGCR-202ENST00000343975 CAMSAP2Q08AD1 1489 aa12.02□□□□□ -0.49
HMGCR-202ENST00000343975 KIAA1107Q9UPP5 1409 aa12.02□□□□□ -0.49
HMGCR-202ENST00000343975 ABCA9Q8IUA7 1624 aa12.01□□□□□ -0.49
HMGCR-202ENST00000343975 CCDC141Q6ZP82 1450 aa12.01□□□□□ -0.49
HMGCR-202ENST00000343975 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.01□□□□□ -0.499e-7■■□□□ 13.3
HMGCR-202ENST00000343975 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12□□□□□ -0.491e-8■■■■■ 27.7
HMGCR-202ENST00000343975 ARAP3Q8WWN8 1544 aa12□□□□□ -0.49
HMGCR-202ENST00000343975 TTC37Q6PGP7 1564 aa12□□□□□ -0.49
HMGCR-202ENST00000343975 ZNF518AQ6AHZ1 1483 aa12□□□□□ -0.49
HMGCR-202ENST00000343975 RRBP1Q9P2E9 1410 aaKnown RBP11.99□□□□□ -0.49
HMGCR-202ENST00000343975 TSPOAP1O95153 1857 aa11.99□□□□□ -0.49
HMGCR-202ENST00000343975 PTPN23Q9H3S7 1636 aa11.99□□□□□ -0.49
HMGCR-202ENST00000343975 KANK1Q14678 1352 aa11.98□□□□□ -0.49
HMGCR-202ENST00000343975 MLECQ14165 292 aa11.97□□□□□ -0.49
HMGCR-202ENST00000343975 C9orf84Q5VXU9 1444 aa11.97□□□□□ -0.49
HMGCR-202ENST00000343975 KIF3BO15066 747 aa11.97□□□□□ -0.49
HMGCR-202ENST00000343975 PREX2Q70Z35 1606 aa11.96□□□□□ -0.49
HMGCR-202ENST00000343975 GGT6Q6P531 493 aa11.96□□□□□ -0.49
HMGCR-202ENST00000343975 LRRIQ1Q96JM4 1722 aa11.96□□□□□ -0.5
HMGCR-202ENST00000343975 SYCP2Q9BX26 1530 aa11.96□□□□□ -0.5
HMGCR-202ENST00000343975 KIF15Q9NS87 1388 aa11.95□□□□□ -0.5
HMGCR-202ENST00000343975 DAPK1P53355 1430 aa11.95□□□□□ -0.5
HMGCR-202ENST00000343975 CCER1Q8TC90 406 aaPredicted RBP11.95□□□□□ -0.5
HMGCR-202ENST00000343975 POGZQ7Z3K3 1410 aa11.94□□□□□ -0.5
HMGCR-202ENST00000343975 TCOF1Q13428 1488 aaKnown RBP11.93□□□□□ -0.5
HMGCR-202ENST00000343975 TRAPPC8Q9Y2L5 1435 aa11.93□□□□□ -0.5
HMGCR-202ENST00000343975 KDM6BO15054 1643 aa11.92□□□□□ -0.5
HMGCR-202ENST00000343975 PLPPR3Q6T4P5 718 aa11.92□□□□□ -0.5
HMGCR-202ENST00000343975 ABCC5O15440 1437 aa11.92□□□□□ -0.5
HMGCR-202ENST00000343975 CDC42BPAQ5VT25 1732 aa11.91□□□□□ -0.5
HMGCR-202ENST00000343975 SETD5Q9C0A6 1442 aa11.91□□□□□ -0.5
HMGCR-202ENST00000343975 ABCC1P33527 1531 aa11.91□□□□□ -0.5
HMGCR-202ENST00000343975 MAP3K4Q9Y6R4 1608 aa11.9□□□□□ -0.5
HMGCR-202ENST00000343975 SLC4A1APQ9BWU0 796 aaKnown RBP11.9□□□□□ -0.5
HMGCR-202ENST00000343975 RTEL1-TNFRSF6BF6WH68 1400 aa11.9□□□□□ -0.5
HMGCR-202ENST00000343975 ROCK1Q13464 1354 aa11.9□□□□□ -0.5
HMGCR-202ENST00000343975 MAGI2Q86UL8 1455 aa11.89□□□□□ -0.51
HMGCR-202ENST00000343975 ANKRD50Q9ULJ7 1429 aa11.89□□□□□ -0.51
HMGCR-202ENST00000343975 WASHC2CQ9Y4E1 1318 aa11.89□□□□□ -0.51
HMGCR-202ENST00000343975 SAMD9LQ8IVG5 1584 aa11.89□□□□□ -0.51
HMGCR-202ENST00000343975 SHANK2Q9UPX8 1470 aa11.88□□□□□ -0.51
HMGCR-202ENST00000343975 ARHGEF5Q12774 1597 aa11.87□□□□□ -0.51
HMGCR-202ENST00000343975 NUP155O75694 1391 aa11.87□□□□□ -0.51
HMGCR-202ENST00000343975 STAG3Q9UJ98 1225 aa11.87□□□□□ -0.51
HMGCR-202ENST00000343975 CDC42BPBQ9Y5S2 1711 aa11.86□□□□□ -0.51
HMGCR-202ENST00000343975 DHX29Q7Z478 1369 aaKnown RBP11.86□□□□□ -0.51
HMGCR-202ENST00000343975 MBD5Q9P267 1494 aa11.86□□□□□ -0.51
HMGCR-202ENST00000343975 ZFYVE16Q7Z3T8 1539 aa11.86□□□□□ -0.51
HMGCR-202ENST00000343975 A2MP01023 1474 aa11.85□□□□□ -0.51
HMGCR-202ENST00000343975 ATP7AQ04656 1500 aa11.85□□□□□ -0.51
HMGCR-202ENST00000343975 ATP10AO60312 1499 aa11.85□□□□□ -0.51
HMGCR-202ENST00000343975 MLH3Q9UHC1 1453 aa11.85□□□□□ -0.51
HMGCR-202ENST00000343975 NCOA1Q15788 1441 aa11.85□□□□□ -0.51
HMGCR-202ENST00000343975 DNMT1P26358 1616 aaKnown RBP11.85□□□□□ -0.51
HMGCR-202ENST00000343975 KIF13AQ9H1H9 1805 aa11.84□□□□□ -0.51
HMGCR-202ENST00000343975 PPP6R1Q9UPN7 881 aa11.83□□□□□ -0.51
HMGCR-202ENST00000343975 HRCP23327 699 aa11.83□□□□□ -0.52
HMGCR-202ENST00000343975 RAB3GAP2Q9H2M9 1393 aa11.83□□□□□ -0.52
HMGCR-202ENST00000343975 HFM1A2PYH4 1435 aa11.83□□□□□ -0.52
HMGCR-202ENST00000343975 DUOX2Q9NRD8 1548 aa11.83□□□□□ -0.52
HMGCR-202ENST00000343975 HECW2Q9P2P5 1572 aa11.82□□□□□ -0.52
HMGCR-202ENST00000343975 CHGAP10645 457 aaKnown RBP11.82□□□□□ -0.52
HMGCR-202ENST00000343975 ARHGEF12Q9NZN5 1544 aa11.81□□□□□ -0.52
HMGCR-202ENST00000343975 ERBINQ96RT1 1412 aa11.8□□□□□ -0.52
HMGCR-202ENST00000343975 YEATS2Q9ULM3 1422 aa11.8□□□□□ -0.52
HMGCR-202ENST00000343975 ADGRL2O95490 1459 aa11.79□□□□□ -0.52
HMGCR-202ENST00000343975 NAIPQ13075 1403 aa11.79□□□□□ -0.52
HMGCR-202ENST00000343975 PKD2Q13563 968 aa11.79□□□□□ -0.52
HMGCR-202ENST00000343975 MPHOSPH9Q99550 1183 aa11.77□□□□□ -0.53
HMGCR-202ENST00000343975 PTPRKQ15262 1439 aa11.77□□□□□ -0.53
HMGCR-202ENST00000343975 COL17A1Q9UMD9 1497 aaPredicted RBP11.76□□□□□ -0.53
HMGCR-202ENST00000343975 NEUROD1Q13562 356 aa11.76□□□□□ -0.53
HMGCR-202ENST00000343975 MAST1Q9Y2H9 1570 aa11.76□□□□□ -0.53
HMGCR-202ENST00000343975 AEBP2Q6ZN18 517 aaPredicted RBP11.75□□□□□ -0.53
HMGCR-202ENST00000343975 KDM5CP41229 1560 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms