RNA–Protein interactions for RNA: ENST00000343958.8

FGD6-201, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FGD6, Length 9,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-201ENST00000343958 KTN1Q86UP2 1357 aaKnown RBP11.23□□□□□ -0.61
FGD6-201ENST00000343958 ROCK2O75116 1388 aaKnown RBP11.23□□□□□ -0.61
FGD6-201ENST00000343958 SOX12O15370 315 aa11.22□□□□□ -0.61
FGD6-201ENST00000343958 SRPK2P78362 688 aaKnown RBP11.22□□□□□ -0.61
FGD6-201ENST00000343958 RCAN3Q9UKA8 241 aa11.22□□□□□ -0.61
FGD6-201ENST00000343958 DEKP35659 375 aaKnown RBP11.21□□□□□ -0.61
FGD6-201ENST00000343958 CCDC146Q8IYE0 955 aa11.2□□□□□ -0.62
FGD6-201ENST00000343958 NUTM2DQ5VT03 806 aaPredicted RBP11.2□□□□□ -0.62
FGD6-201ENST00000343958 ANKRD30AQ9BXX3 1397 aa11.2□□□□□ -0.62
FGD6-201ENST00000343958 KANK1Q14678 1352 aa11.19□□□□□ -0.62
FGD6-201ENST00000343958 PDS5BQ9NTI5 1447 aa11.19□□□□□ -0.62
FGD6-201ENST00000343958 RALBP1Q15311 655 aa11.18□□□□□ -0.62
FGD6-201ENST00000343958 LMOD2Q6P5Q4 547 aa11.17□□□□□ -0.62
FGD6-201ENST00000343958 CARMIL2Q6F5E8 1435 aa11.17□□□□□ -0.62
FGD6-201ENST00000343958 TRIM44Q96DX7 344 aaPredicted RBP11.16□□□□□ -0.62
FGD6-201ENST00000343958 GOLGA6L22H0YM25 854 aa11.16□□□□□ -0.62
FGD6-201ENST00000343958 HSP90AB1P08238 724 aaKnown RBP11.16□□□□□ -0.62
FGD6-201ENST00000343958 IGF1RP08069 1367 aa11.16□□□□□ -0.62
FGD6-201ENST00000343958 KIF3BO15066 747 aa11.15□□□□□ -0.62
FGD6-201ENST00000343958 EFCAB2Q5VUJ9 269 aa11.14□□□□□ -0.63
FGD6-201ENST00000343958 CASC1Q6TDU7 716 aa11.14□□□□□ -0.63
FGD6-201ENST00000343958 ST20-MTHFSA0A0A6YYL1 179 aa11.14□□□□□ -0.63
FGD6-201ENST00000343958 U2AF1L5P0DN76 240 aaPredicted RBP11.14□□□□□ -0.63
FGD6-201ENST00000343958 U2AF1Q01081 240 aaKnown RBP eCLIP11.14□□□□□ -0.63
FGD6-201ENST00000343958 SMARCA4P51532 1647 aa11.13□□□□□ -0.63
FGD6-201ENST00000343958 APBB1O00213 710 aa11.13□□□□□ -0.63
FGD6-201ENST00000343958 ERICH6BQ5W0A0 696 aa11.13□□□□□ -0.63
FGD6-201ENST00000343958 JPH4Q96JJ6 628 aa11.13□□□□□ -0.63
FGD6-201ENST00000343958 PLIN1O60240 522 aa11.12□□□□□ -0.63
FGD6-201ENST00000343958 PRKRIP1Q9H875 184 aaPredicted RBP11.12□□□□□ -0.63
FGD6-201ENST00000343958 MS4A1P11836 297 aa11.12□□□□□ -0.63
FGD6-201ENST00000343958 TAOK2Q9UL54 1235 aa11.12□□□□□ -0.63
FGD6-201ENST00000343958 EXOC6Q8TAG9 804 aa11.11□□□□□ -0.63
FGD6-201ENST00000343958 PANK3Q9H999 370 aa11.11□□□□□ -0.63
FGD6-201ENST00000343958 PHLDB1Q86UU1 1377 aa11.11□□□□□ -0.63
FGD6-201ENST00000343958 RAD54L2Q9Y4B4 1467 aa11.1□□□□□ -0.63
FGD6-201ENST00000343958 TCERG1O14776 1098 aaKnown RBP11.1□□□□□ -0.63
FGD6-201ENST00000343958 CLUAP1Q96AJ1 413 aa11.1□□□□□ -0.63
FGD6-201ENST00000343958 PTMAP06454 111 aaKnown RBP11.1□□□□□ -0.63
FGD6-201ENST00000343958 FANCD2Q9BXW9 1451 aa11.1□□□□□ -0.63
FGD6-201ENST00000343958 ZNF644Q9H582 1327 aaPredicted RBP11.1□□□□□ -0.63
FGD6-201ENST00000343958 HAP1P54257 671 aaPredicted RBP11.1□□□□□ -0.63
FGD6-201ENST00000343958 HDGFL2Q7Z4V5 671 aaPredicted RBP11.09□□□□□ -0.63
FGD6-201ENST00000343958 ITPRIPQ8IWB1 547 aa11.09□□□□□ -0.63
FGD6-201ENST00000343958 PNNQ9H307 717 aaKnown RBP11.09□□□□□ -0.63
FGD6-201ENST00000343958 RRP7AQ9Y3A4 280 aaKnown RBP11.09□□□□□ -0.63
FGD6-201ENST00000343958 KIF21BO75037 1637 aa11.09□□□□□ -0.63
FGD6-201ENST00000343958 GOLGA2Q08379 1002 aa11.09□□□□□ -0.63
FGD6-201ENST00000343958 HSCBQ8IWL3 235 aa11.09□□□□□ -0.63
FGD6-201ENST00000343958 OS9Q13438 667 aaPredicted RBP11.09□□□□□ -0.63
FGD6-201ENST00000343958 NAP1L5Q96NT1 182 aaPredicted RBP11.09□□□□□ -0.63
FGD6-201ENST00000343958 TRAK1Q9UPV9 953 aa11.08□□□□□ -0.64
FGD6-201ENST00000343958 NLRP13Q86W25 1043 aa11.08□□□□□ -0.64
FGD6-201ENST00000343958 SLKQ9H2G2 1235 aaPredicted RBP11.08□□□□□ -0.64
FGD6-201ENST00000343958 MYBBP1AQ9BQG0 1328 aaKnown RBP11.08□□□□□ -0.64
FGD6-201ENST00000343958 PLCB2Q00722 1185 aa11.07□□□□□ -0.64
FGD6-201ENST00000343958 CCDC18Q5T9S5 1454 aa11.07□□□□□ -0.64
FGD6-201ENST00000343958 GLIPR1L2Q4G1C9 344 aa11.07□□□□□ -0.64
FGD6-201ENST00000343958 SPAG9O60271 1321 aaKnown RBP11.06□□□□□ -0.64
FGD6-201ENST00000343958 SLC4A3P48751 1232 aa11.06□□□□□ -0.64
FGD6-201ENST00000343958 IPO9Q96P70 1041 aaKnown RBP11.06□□□□□ -0.64
FGD6-201ENST00000343958 KIF15Q9NS87 1388 aa11.06□□□□□ -0.64
FGD6-201ENST00000343958 MFAP1P55081 439 aaKnown RBP11.05□□□□□ -0.64
FGD6-201ENST00000343958 CRBNQ96SW2 442 aa11.05□□□□□ -0.64
FGD6-201ENST00000343958 FGD5Q6ZNL6 1462 aa11.05□□□□□ -0.64
FGD6-201ENST00000343958 CHMP4BQ9H444 224 aaKnown RBP11.05□□□□□ -0.64
FGD6-201ENST00000343958 RWDD1Q9H446 243 aaPredicted RBP11.05□□□□□ -0.64
FGD6-201ENST00000343958 SMC4Q9NTJ3 1288 aa11.03□□□□□ -0.64
FGD6-201ENST00000343958 FOXD4L1Q9NU39 408 aa11.03□□□□□ -0.64
FGD6-201ENST00000343958 GZF1Q9H116 711 aaPredicted RBP11.03□□□□□ -0.64
FGD6-201ENST00000343958 USP47Q96K76 1375 aa11.03□□□□□ -0.64
FGD6-201ENST00000343958 RRP1P56182 461 aaKnown RBP11.02□□□□□ -0.64
FGD6-201ENST00000343958 PDE3BQ13370 1112 aa11.02□□□□□ -0.64
FGD6-201ENST00000343958 BCL2L13Q9BXK5 485 aa11.02□□□□□ -0.64
FGD6-201ENST00000343958 DNTTIP2Q5QJE6 756 aaKnown RBP11.02□□□□□ -0.64
FGD6-201ENST00000343958 RTF1Q92541 710 aaKnown RBP11.02□□□□□ -0.65
FGD6-201ENST00000343958 CENPJQ9HC77 1338 aaPredicted RBP11.02□□□□□ -0.65
FGD6-201ENST00000343958 KIF7Q2M1P5 1343 aa11.02□□□□□ -0.65
FGD6-201ENST00000343958 FGD6Q6ZV73 1430 aa11.01□□□□□ -0.65
FGD6-201ENST00000343958 IPO8O15397 1037 aaKnown RBP11.01□□□□□ -0.65
FGD6-201ENST00000343958 PMFBP1Q8TBY8 1022 aa11.01□□□□□ -0.65
FGD6-201ENST00000343958 NAP1L2Q9ULW6 460 aaPredicted RBP11.01□□□□□ -0.65
FGD6-201ENST00000343958 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.01□□□□□ -0.65
FGD6-201ENST00000343958 PDE4AP27815 886 aa11□□□□□ -0.65
FGD6-201ENST00000343958 NUTM2FA1L443 756 aa11□□□□□ -0.65
FGD6-201ENST00000343958 KCNJ4P48050 445 aa11□□□□□ -0.65
FGD6-201ENST00000343958 CCDC7Q96M83 1385 aa11□□□□□ -0.65
FGD6-201ENST00000343958 PAK3O75914 559 aaPredicted RBP11□□□□□ -0.65
FGD6-201ENST00000343958 WASHC2CQ9Y4E1 1318 aa11□□□□□ -0.65
FGD6-201ENST00000343958 EIF3AQ14152 1382 aaKnown RBP10.99□□□□□ -0.65
FGD6-201ENST00000343958 HDGFP51858 240 aaKnown RBP10.99□□□□□ -0.65
FGD6-201ENST00000343958 CCDC144AA2RUR9 1427 aa10.99□□□□□ -0.65
FGD6-201ENST00000343958 RSPH4AQ5TD94 716 aa10.99□□□□□ -0.65
FGD6-201ENST00000343958 ARAP1Q96P48 1450 aa10.99□□□□□ -0.65
FGD6-201ENST00000343958 APAF1O14727 1248 aa10.99□□□□□ -0.65
FGD6-201ENST00000343958 ZBED9Q6R2W3 1325 aa10.99□□□□□ -0.65
FGD6-201ENST00000343958 LRRC9Q6ZRR7 1453 aa10.98□□□□□ -0.65
FGD6-201ENST00000343958 ELL2O00472 640 aaPredicted RBP10.98□□□□□ -0.65
FGD6-201ENST00000343958 TRHP20396 242 aaPredicted RBP10.98□□□□□ -0.65
FGD6-201ENST00000343958 WASHC2AQ641Q2 1341 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms