RNA–Protein interactions for RNA: ENST00000343217.6

DUSP28-201, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DUSP28, Length 1,555 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-201ENST00000343217 ARHGEF40Q8TER5 1519 aa32.2■■■□□ 2.74
DUSP28-201ENST00000343217 PPARGC1BQ86YN6 1023 aaKnown RBP32.19■■■□□ 2.74
DUSP28-201ENST00000343217 ZMYM4Q5VZL5 1548 aa32.19■■■□□ 2.74
DUSP28-201ENST00000343217 CCDC18Q5T9S5 1454 aa32.17■■■□□ 2.74
DUSP28-201ENST00000343217 ADAMTSL3P82987 1691 aa32.17■■■□□ 2.74
DUSP28-201ENST00000343217 TIAM1Q13009 1591 aa32.14■■■□□ 2.74
DUSP28-201ENST00000343217 BCORL1Q5H9F3 1711 aa32.12■■■□□ 2.73
DUSP28-201ENST00000343217 SCAPERQ9BY12 1400 aa32.12■■■□□ 2.73
DUSP28-201ENST00000343217 EFCAB2Q5VUJ9 269 aa32.11■■■□□ 2.73
DUSP28-201ENST00000343217 POGZQ7Z3K3 1410 aa32.1■■■□□ 2.73
DUSP28-201ENST00000343217 MAGI2Q86UL8 1455 aa32.09■■■□□ 2.73
DUSP28-201ENST00000343217 ZFYVE16Q7Z3T8 1539 aa32.07■■■□□ 2.72
DUSP28-201ENST00000343217 HECW2Q9P2P5 1572 aa32.05■■■□□ 2.72
DUSP28-201ENST00000343217 YEATS2Q9ULM3 1422 aa32.05■■■□□ 2.72
DUSP28-201ENST00000343217 CDC42BPBQ9Y5S2 1711 aa32.05■■■□□ 2.72
DUSP28-201ENST00000343217 ARHGAP5Q13017 1502 aa32.04■■■□□ 2.72
DUSP28-201ENST00000343217 PCGF6Q9BYE7 350 aa32.03■■■□□ 2.72
DUSP28-201ENST00000343217 ARID4BQ4LE39 1312 aaPredicted RBP32.02■■■□□ 2.72
DUSP28-201ENST00000343217 PTPRMP28827 1452 aa32.01■■■□□ 2.72
DUSP28-201ENST00000343217 MADDQ8WXG6 1647 aa32.01■■■□□ 2.71
DUSP28-201ENST00000343217 SIGLEC1Q9BZZ2 1709 aa32.01■■■□□ 2.71
DUSP28-201ENST00000343217 KANK4Q5T7N3 995 aaPredicted RBP32■■■□□ 2.71
DUSP28-201ENST00000343217 PREX2Q70Z35 1606 aa32■■■□□ 2.71
DUSP28-201ENST00000343217 LRRC9Q6ZRR7 1453 aa31.99■■■□□ 2.71
DUSP28-201ENST00000343217 ZNF518AQ6AHZ1 1483 aa31.95■■■□□ 2.71
DUSP28-201ENST00000343217 KDM5CP41229 1560 aa31.94■■■□□ 2.7
DUSP28-201ENST00000343217 CDC42BPAQ5VT25 1732 aa31.94■■■□□ 2.7
DUSP28-201ENST00000343217 ATP10AO60312 1499 aa31.9■■■□□ 2.7
DUSP28-201ENST00000343217 RIMS1Q86UR5 1692 aaKnown RBP31.89■■■□□ 2.7
DUSP28-201ENST00000343217 ABCC1P33527 1531 aa31.88■■■□□ 2.69
DUSP28-201ENST00000343217 AFAP1Q8N556 730 aa31.87■■■□□ 2.69
DUSP28-201ENST00000343217 C9orf84Q5VXU9 1444 aa31.86■■■□□ 2.69
DUSP28-201ENST00000343217 ITSN2Q9NZM3 1697 aa31.85■■■□□ 2.69
DUSP28-201ENST00000343217 ARHGEF12Q9NZN5 1544 aa31.84■■■□□ 2.69
DUSP28-201ENST00000343217 MTUS2Q5JR59 1369 aa31.83■■■□□ 2.69
DUSP28-201ENST00000343217 EHBP1L1Q8N3D4 1523 aa31.82■■■□□ 2.68
DUSP28-201ENST00000343217 GPATCH8Q9UKJ3 1502 aaKnown RBP31.81■■■□□ 2.68
DUSP28-201ENST00000343217 TRAPPC8Q9Y2L5 1435 aa31.8■■■□□ 2.68
DUSP28-201ENST00000343217 MLH3Q9UHC1 1453 aa31.8■■■□□ 2.68
DUSP28-201ENST00000343217 DIP2CQ9Y2E4 1556 aa31.79■■■□□ 2.68
DUSP28-201ENST00000343217 FER1L4A9Z1Z3 1794 aa31.78■■■□□ 2.68
DUSP28-201ENST00000343217 SAMD9LQ8IVG5 1584 aa31.76■■■□□ 2.68
DUSP28-201ENST00000343217 REREQ9P2R6 1566 aa31.76■■■□□ 2.67
DUSP28-201ENST00000343217 ABCA6Q8N139 1617 aa31.75■■■□□ 2.67
DUSP28-201ENST00000343217 MLECQ14165 292 aa31.74■■■□□ 2.67
DUSP28-201ENST00000343217 SUPT6HQ7KZ85 1726 aaKnown RBP31.72■■■□□ 2.67
DUSP28-201ENST00000343217 KIDINS220Q9ULH0 1771 aa31.71■■■□□ 2.67
DUSP28-201ENST00000343217 MYT1LQ9UL68 1186 aa31.69■■■□□ 2.66
DUSP28-201ENST00000343217 RRBP1Q9P2E9 1410 aaKnown RBP31.69■■■□□ 2.66
DUSP28-201ENST00000343217 LMTK3Q96Q04 1460 aa31.69■■■□□ 2.66
DUSP28-201ENST00000343217 SYCP2Q9BX26 1530 aa31.68■■■□□ 2.66
DUSP28-201ENST00000343217 CCNB3Q8WWL7 1395 aa31.68■■■□□ 2.66
DUSP28-201ENST00000343217 ZNF777Q9ULD5 760 aaPredicted RBP31.68■■■□□ 2.66
DUSP28-201ENST00000343217 KIAA1107Q9UPP5 1409 aa31.65■■■□□ 2.66
DUSP28-201ENST00000343217 CFDP1Q9UEE9 299 aaPredicted RBP31.64■■■□□ 2.66
DUSP28-201ENST00000343217 PLEKHH2Q8IVE3 1493 aa31.64■■■□□ 2.65
DUSP28-201ENST00000343217 AGLP35573 1532 aa31.63■■■□□ 2.65
DUSP28-201ENST00000343217 NCOA2Q15596 1464 aa31.63■■■□□ 2.65
DUSP28-201ENST00000343217 HNRNPMP52272 730 aaKnown RBP eCLIP31.6■■■□□ 2.65
DUSP28-201ENST00000343217 PLPPR3Q6T4P5 718 aa31.58■■■□□ 2.65
DUSP28-201ENST00000343217 SPAG9O60271 1321 aaKnown RBP31.55■■■□□ 2.64
DUSP28-201ENST00000343217 INO80Q9ULG1 1556 aaPredicted RBP31.53■■■□□ 2.64
DUSP28-201ENST00000343217 ATP7AQ04656 1500 aa31.53■■■□□ 2.64
DUSP28-201ENST00000343217 MYOM3Q5VTT5 1437 aa31.51■■■□□ 2.64
DUSP28-201ENST00000343217 ZNF644Q9H582 1327 aaPredicted RBP31.49■■■□□ 2.63
DUSP28-201ENST00000343217 CEBPAP49715 358 aaPredicted RBP31.48■■■□□ 2.63
DUSP28-201ENST00000343217 FGD6Q6ZV73 1430 aa31.48■■■□□ 2.63
DUSP28-201ENST00000343217 PREX1Q8TCU6 1659 aa31.48■■■□□ 2.63
DUSP28-201ENST00000343217 MBD5Q9P267 1494 aa31.48■■■□□ 2.63
DUSP28-201ENST00000343217 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.47■■■□□ 2.63
DUSP28-201ENST00000343217 SETD1BQ9UPS6 1966 aaKnown RBP31.46■■■□□ 2.63
DUSP28-201ENST00000343217 C3P01024 1663 aa31.45■■■□□ 2.63
DUSP28-201ENST00000343217 HSPA2P54652 639 aa31.45■■■□□ 2.63
DUSP28-201ENST00000343217 PLXNC1O60486 1568 aa31.45■■■□□ 2.63
DUSP28-201ENST00000343217 ILDR1Q86SU0 546 aaPredicted RBP31.44■■■□□ 2.62
DUSP28-201ENST00000343217 MIA2Q96PC5 1412 aa31.41■■■□□ 2.62
DUSP28-201ENST00000343217 A2MP01023 1474 aa31.41■■■□□ 2.62
DUSP28-201ENST00000343217 CNTLNQ9NXG0 1405 aa31.39■■■□□ 2.62
DUSP28-201ENST00000343217 ADGBQ8N7X0 1667 aa31.39■■■□□ 2.62
DUSP28-201ENST00000343217 ESF1Q9H501 851 aaKnown RBP31.37■■■□□ 2.61
DUSP28-201ENST00000343217 CAMSAP2Q08AD1 1489 aa31.36■■■□□ 2.61
DUSP28-201ENST00000343217 RTEL1-TNFRSF6BF6WH68 1400 aa31.36■■■□□ 2.61
DUSP28-201ENST00000343217 MROH2AA6NES4 1674 aa31.35■■■□□ 2.61
DUSP28-201ENST00000343217 PTPN23Q9H3S7 1636 aa31.34■■■□□ 2.61
DUSP28-201ENST00000343217 FAM50AQ14320 339 aaKnown RBP31.34■■■□□ 2.61
DUSP28-201ENST00000343217 CCDC141Q6ZP82 1450 aa31.32■■■□□ 2.6
DUSP28-201ENST00000343217 UHRF1BP1Q6BDS2 1440 aa31.32■■■□□ 2.6
DUSP28-201ENST00000343217 TCOF1Q13428 1488 aaKnown RBP31.31■■■□□ 2.6
DUSP28-201ENST00000343217 RSPH4AQ5TD94 716 aa31.28■■■□□ 2.6
DUSP28-201ENST00000343217 ARHGEF5Q12774 1597 aa31.28■■■□□ 2.6
DUSP28-201ENST00000343217 CLTCQ00610 1675 aaKnown RBP31.26■■■□□ 2.59
DUSP28-201ENST00000343217 ZMYM3Q14202 1370 aa31.24■■■□□ 2.59
DUSP28-201ENST00000343217 DHX29Q7Z478 1369 aaKnown RBP31.23■■■□□ 2.59
DUSP28-201ENST00000343217 STRCQ7RTU9 1775 aa31.23■■■□□ 2.59
DUSP28-201ENST00000343217 NPATQ14207 1427 aa31.23■■■□□ 2.59
DUSP28-201ENST00000343217 GGT6Q6P531 493 aa31.2■■■□□ 2.58
DUSP28-201ENST00000343217 PPP6R1Q9UPN7 881 aa31.2■■■□□ 2.58
DUSP28-201ENST00000343217 ITGAEP38570 1179 aa31.18■■■□□ 2.58
DUSP28-201ENST00000343217 FBXO41Q8TF61 875 aa31.14■■■□□ 2.58
DUSP28-201ENST00000343217 MAST1Q9Y2H9 1570 aa31.13■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms