RNA–Protein interactions for RNA: ENST00000342916.7

EGFR-202, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-202ENST00000342916 PTPN23Q9H3S7 1636 aa28.46■■■□□ 2.15
EGFR-202ENST00000342916 CFDP1Q9UEE9 299 aaPredicted RBP28.45■■■□□ 2.15
EGFR-202ENST00000342916 FAM69CQ0P6D2 419 aa28.45■■■□□ 2.14
EGFR-202ENST00000342916 ZNF777Q9ULD5 760 aaPredicted RBP28.45■■■□□ 2.14
EGFR-202ENST00000342916 FAM50AQ14320 339 aaKnown RBP28.44■■■□□ 2.14
EGFR-202ENST00000342916 ARHGAP5Q13017 1502 aa28.42■■■□□ 2.14
EGFR-202ENST00000342916 PLCH2O75038 1416 aa28.41■■■□□ 2.14
EGFR-202ENST00000342916 MAP3K4Q9Y6R4 1608 aa28.4■■■□□ 2.14
EGFR-202ENST00000342916 MIA2Q96PC5 1412 aa28.4■■■□□ 2.14
EGFR-202ENST00000342916 GLI2P10070 1586 aa28.4■■■□□ 2.14
EGFR-202ENST00000342916 TSPOAP1O95153 1857 aa28.39■■■□□ 2.14
EGFR-202ENST00000342916 CD109Q6YHK3 1445 aa28.39■■■□□ 2.14
EGFR-202ENST00000342916 ITGAEP38570 1179 aa28.37■■■□□ 2.13
EGFR-202ENST00000342916 CAMSAP2Q08AD1 1489 aa28.37■■■□□ 2.13
EGFR-202ENST00000342916 SAMD9LQ8IVG5 1584 aa28.37■■■□□ 2.13
EGFR-202ENST00000342916 TCOF1Q13428 1488 aaKnown RBP28.35■■■□□ 2.13
EGFR-202ENST00000342916 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.35■■■□□ 2.13
EGFR-202ENST00000342916 FANCAO15360 1455 aa28.31■■■□□ 2.12
EGFR-202ENST00000342916 PPRC1Q5VV67 1664 aaKnown RBP28.3■■■□□ 2.12
EGFR-202ENST00000342916 ARAP3Q8WWN8 1544 aa28.3■■■□□ 2.12
EGFR-202ENST00000342916 EFCAB2Q5VUJ9 269 aa28.28■■■□□ 2.12
EGFR-202ENST00000342916 TRHP20396 242 aaPredicted RBP28.26■■■□□ 2.11
EGFR-202ENST00000342916 HNRNPMP52272 730 aaKnown RBP eCLIP28.26■■■□□ 2.11
EGFR-202ENST00000342916 SYCP2Q9BX26 1530 aa28.26■■■□□ 2.11
EGFR-202ENST00000342916 ARHGEF12Q9NZN5 1544 aa28.25■■■□□ 2.11
EGFR-202ENST00000342916 PTPRKQ15262 1439 aa28.23■■■□□ 2.11
EGFR-202ENST00000342916 ABCC1P33527 1531 aa28.22■■■□□ 2.11
EGFR-202ENST00000342916 DNMT1P26358 1616 aaKnown RBP28.21■■■□□ 2.11
EGFR-202ENST00000342916 MBD5Q9P267 1494 aa28.19■■■□□ 2.1
EGFR-202ENST00000342916 AKNAQ7Z591 1439 aa28.19■■■□□ 2.1
EGFR-202ENST00000342916 ADGRL1O94910 1474 aa28.18■■■□□ 2.1
EGFR-202ENST00000342916 ABCC5O15440 1437 aa28.18■■■□□ 2.1
EGFR-202ENST00000342916 DAPK1P53355 1430 aa28.17■■■□□ 2.1
EGFR-202ENST00000342916 CFAP74Q9C0B2 1584 aa28.17■■■□□ 2.1
EGFR-202ENST00000342916 DHX57Q6P158 1386 aaKnown RBP28.16■■■□□ 2.1
EGFR-202ENST00000342916 RAB3GAP2Q9H2M9 1393 aa28.16■■■□□ 2.1
EGFR-202ENST00000342916 CHIC2Q9UKJ5 165 aa28.16■■■□□ 2.1
EGFR-202ENST00000342916 CROCC2H7BZ55 1655 aa28.15■■■□□ 2.1
EGFR-202ENST00000342916 SETD5Q9C0A6 1442 aa28.14■■■□□ 2.1
EGFR-202ENST00000342916 TRAPPC8Q9Y2L5 1435 aa28.14■■■□□ 2.1
EGFR-202ENST00000342916 SCAPERQ9BY12 1400 aa28.14■■■□□ 2.09
EGFR-202ENST00000342916 ARHGEF5Q12774 1597 aa28.13■■■□□ 2.09
EGFR-202ENST00000342916 KIAA1107Q9UPP5 1409 aa28.13■■■□□ 2.09
EGFR-202ENST00000342916 PLEKHH2Q8IVE3 1493 aa28.13■■■□□ 2.09
EGFR-202ENST00000342916 NEO1Q92859 1461 aa28.12■■■□□ 2.09
EGFR-202ENST00000342916 AFAP1Q8N556 730 aa28.1■■■□□ 2.09
EGFR-202ENST00000342916 CCDC141Q6ZP82 1450 aa28.1■■■□□ 2.09
EGFR-202ENST00000342916 TEX14Q8IWB6 1497 aa28.09■■■□□ 2.09
EGFR-202ENST00000342916 RAPGEF3O95398 923 aa28.04■■■□□ 2.08
EGFR-202ENST00000342916 C9orf84Q5VXU9 1444 aa28.03■■■□□ 2.08
EGFR-202ENST00000342916 RRP7BPQ9NSQ0 103 aa28.02■■■□□ 2.08
EGFR-202ENST00000342916 POGZQ7Z3K3 1410 aa28.01■■■□□ 2.07
EGFR-202ENST00000342916 RICTORQ6R327 1708 aa28.01■■■□□ 2.07
EGFR-202ENST00000342916 ADGBQ8N7X0 1667 aa28.01■■■□□ 2.07
EGFR-202ENST00000342916 COL17A1Q9UMD9 1497 aaPredicted RBP28■■■□□ 2.07
EGFR-202ENST00000342916 CLSPNQ9HAW4 1339 aa28■■■□□ 2.07
EGFR-202ENST00000342916 HFM1A2PYH4 1435 aa28■■■□□ 2.07
EGFR-202ENST00000342916 TSPY4P0CV99 314 aa27.99■■■□□ 2.07
EGFR-202ENST00000342916 TSPY10P0CW01 314 aa27.99■■■□□ 2.07
EGFR-202ENST00000342916 SHANK2Q9UPX8 1470 aa27.99■■■□□ 2.07
EGFR-202ENST00000342916 DENND4BO75064 1496 aaPredicted RBP27.99■■■□□ 2.07
EGFR-202ENST00000342916 FRMPD1Q5SYB0 1578 aa27.99■■■□□ 2.07
EGFR-202ENST00000342916 ZNF518AQ6AHZ1 1483 aa27.98■■■□□ 2.07
EGFR-202ENST00000342916 RSPH4AQ5TD94 716 aa27.98■■■□□ 2.07
EGFR-202ENST00000342916 NAIPQ13075 1403 aa27.95■■■□□ 2.06
EGFR-202ENST00000342916 KDM5CP41229 1560 aa27.94■■■□□ 2.06
EGFR-202ENST00000342916 MAST1Q9Y2H9 1570 aa27.94■■■□□ 2.06
EGFR-202ENST00000342916 ZFYVE16Q7Z3T8 1539 aa27.94■■■□□ 2.06
EGFR-202ENST00000342916 SPAG9O60271 1321 aaKnown RBP27.94■■■□□ 2.06
EGFR-202ENST00000342916 NCOA1Q15788 1441 aa27.94■■■□□ 2.06
EGFR-202ENST00000342916 INO80Q9ULG1 1556 aaPredicted RBP27.93■■■□□ 2.06
EGFR-202ENST00000342916 ADGRL2O95490 1459 aa27.93■■■□□ 2.06
EGFR-202ENST00000342916 KDM6BO15054 1643 aa27.92■■■□□ 2.06
EGFR-202ENST00000342916 KIDINS220Q9ULH0 1771 aa27.92■■■□□ 2.06
EGFR-202ENST00000342916 GCC2Q8IWJ2 1684 aa27.91■■■□□ 2.06
EGFR-202ENST00000342916 ATP7AQ04656 1500 aa27.91■■■□□ 2.06
EGFR-202ENST00000342916 ROCK1Q13464 1354 aa27.91■■■□□ 2.06
EGFR-202ENST00000342916 MYT1LQ9UL68 1186 aa27.9■■■□□ 2.06
EGFR-202ENST00000342916 ANKRD30AQ9BXX3 1397 aa27.89■■■□□ 2.06
EGFR-202ENST00000342916 HECW2Q9P2P5 1572 aa27.88■■■□□ 2.05
EGFR-202ENST00000342916 PLXNC1O60486 1568 aa27.86■■■□□ 2.05
EGFR-202ENST00000342916 KIF15Q9NS87 1388 aa27.86■■■□□ 2.05
EGFR-202ENST00000342916 RTEL1-TNFRSF6BF6WH68 1400 aa27.84■■■□□ 2.05
EGFR-202ENST00000342916 MLH3Q9UHC1 1453 aa27.82■■■□□ 2.04
EGFR-202ENST00000342916 ABCA6Q8N139 1617 aa27.82■■■□□ 2.04
EGFR-202ENST00000342916 YEATS2Q9ULM3 1422 aa27.81■■■□□ 2.04
EGFR-202ENST00000342916 ZMYM4Q5VZL5 1548 aa27.81■■■□□ 2.04
EGFR-202ENST00000342916 ANKRD50Q9ULJ7 1429 aa27.76■■■□□ 2.04
EGFR-202ENST00000342916 DIP2CQ9Y2E4 1556 aa27.76■■■□□ 2.03
EGFR-202ENST00000342916 DUOX2Q9NRD8 1548 aa27.73■■■□□ 2.03
EGFR-202ENST00000342916 A2MP01023 1474 aa27.68■■■□□ 2.02
EGFR-202ENST00000342916 MAGI2Q86UL8 1455 aa27.67■■■□□ 2.02
EGFR-202ENST00000342916 SIGLEC1Q9BZZ2 1709 aa27.66■■■□□ 2.02
EGFR-202ENST00000342916 ARHGEF40Q8TER5 1519 aa27.65■■■□□ 2.02
EGFR-202ENST00000342916 DHX29Q7Z478 1369 aaKnown RBP27.65■■■□□ 2.02
EGFR-202ENST00000342916 ERBINQ96RT1 1412 aa27.65■■■□□ 2.02
EGFR-202ENST00000342916 TRIM52Q96A61 297 aa27.62■■■□□ 2.01
EGFR-202ENST00000342916 ATP10AO60312 1499 aa27.61■■■□□ 2.01
EGFR-202ENST00000342916 KIF3BO15066 747 aa27.59■■■□□ 2.01
EGFR-202ENST00000342916 SIN3AQ96ST3 1273 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms