RNA–Protein interactions for RNA: ENST00000342905.10

NLRC4-201, Transcript of NLR family CARD domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene NLRC4, Length 1,362 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4-201ENST00000342905 MAP3K1Q13233 1512 aa13.57□□□□□ -0.24
NLRC4-201ENST00000342905 TROQ12816 1431 aaPredicted RBP13.57□□□□□ -0.24
NLRC4-201ENST00000342905 PHLDB1Q86UU1 1377 aa13.56□□□□□ -0.24
NLRC4-201ENST00000342905 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.56□□□□□ -0.24
NLRC4-201ENST00000342905 NEO1Q92859 1461 aa13.55□□□□□ -0.24
NLRC4-201ENST00000342905 TTC37Q6PGP7 1564 aa13.54□□□□□ -0.24
NLRC4-201ENST00000342905 KIF14Q15058 1648 aa13.54□□□□□ -0.24
NLRC4-201ENST00000342905 PPARGC1BQ86YN6 1023 aaKnown RBP13.54□□□□□ -0.24
NLRC4-201ENST00000342905 COL17A1Q9UMD9 1497 aaPredicted RBP13.53□□□□□ -0.24
NLRC4-201ENST00000342905 ARAP3Q8WWN8 1544 aa13.52□□□□□ -0.25
NLRC4-201ENST00000342905 CFAP74Q9C0B2 1584 aa13.51□□□□□ -0.25
NLRC4-201ENST00000342905 APLP2Q06481 763 aa13.51□□□□□ -0.25
NLRC4-201ENST00000342905 FANCAO15360 1455 aa13.5□□□□□ -0.25
NLRC4-201ENST00000342905 SUPT6HQ7KZ85 1726 aaKnown RBP13.5□□□□□ -0.25
NLRC4-201ENST00000342905 PLCH2O75038 1416 aa13.49□□□□□ -0.25
NLRC4-201ENST00000342905 LRRC9Q6ZRR7 1453 aa13.48□□□□□ -0.25
NLRC4-201ENST00000342905 MYO5CQ9NQX4 1742 aa13.47□□□□□ -0.25
NLRC4-201ENST00000342905 EHBP1L1Q8N3D4 1523 aa13.47□□□□□ -0.25
NLRC4-201ENST00000342905 AKNAQ7Z591 1439 aa13.46□□□□□ -0.26
NLRC4-201ENST00000342905 MTUS2Q5JR59 1369 aa13.46□□□□□ -0.26
NLRC4-201ENST00000342905 KANK4Q5T7N3 995 aaPredicted RBP13.45□□□□□ -0.26
NLRC4-201ENST00000342905 EFCAB2Q5VUJ9 269 aa13.44□□□□□ -0.26
NLRC4-201ENST00000342905 ARHGAP5Q13017 1502 aa13.44□□□□□ -0.26
NLRC4-201ENST00000342905 DENND4BO75064 1496 aaPredicted RBP13.43□□□□□ -0.26
NLRC4-201ENST00000342905 ADGRL1O94910 1474 aa13.43□□□□□ -0.26
NLRC4-201ENST00000342905 PREX2Q70Z35 1606 aa13.42□□□□□ -0.26
NLRC4-201ENST00000342905 FRMPD1Q5SYB0 1578 aa13.41□□□□□ -0.26
NLRC4-201ENST00000342905 RAPGEF3O95398 923 aa13.41□□□□□ -0.26
NLRC4-201ENST00000342905 POTEHQ6S545 545 aa13.41□□□□□ -0.26
NLRC4-201ENST00000342905 RICTORQ6R327 1708 aa13.39□□□□□ -0.27
NLRC4-201ENST00000342905 POGZQ7Z3K3 1410 aa13.39□□□□□ -0.27
NLRC4-201ENST00000342905 SCAPERQ9BY12 1400 aa13.39□□□□□ -0.27
NLRC4-201ENST00000342905 TRIM26Q12899 539 aaPredicted RBP13.39□□□□□ -0.27
NLRC4-201ENST00000342905 ZMYM4Q5VZL5 1548 aa13.39□□□□□ -0.27
NLRC4-201ENST00000342905 CDC42BPAQ5VT25 1732 aa13.39□□□□□ -0.27
NLRC4-201ENST00000342905 CDC42BPBQ9Y5S2 1711 aa13.39□□□□□ -0.27
NLRC4-201ENST00000342905 ITSN2Q9NZM3 1697 aa13.38□□□□□ -0.27
NLRC4-201ENST00000342905 GPATCH8Q9UKJ3 1502 aaKnown RBP13.38□□□□□ -0.27
NLRC4-201ENST00000342905 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.38□□□□□ -0.27
NLRC4-201ENST00000342905 CCNB3Q8WWL7 1395 aa13.38□□□□□ -0.27
NLRC4-201ENST00000342905 ZNF518AQ6AHZ1 1483 aa13.36□□□□□ -0.27
NLRC4-201ENST00000342905 MAGI2Q86UL8 1455 aa13.36□□□□□ -0.27
NLRC4-201ENST00000342905 ABCC1P33527 1531 aa13.36□□□□□ -0.27
NLRC4-201ENST00000342905 NCOA2Q15596 1464 aa13.35□□□□□ -0.27
NLRC4-201ENST00000342905 ARHGEF40Q8TER5 1519 aa13.35□□□□□ -0.27
NLRC4-201ENST00000342905 PCGF6Q9BYE7 350 aa13.33□□□□□ -0.27
NLRC4-201ENST00000342905 CFDP1Q9UEE9 299 aaPredicted RBP13.33□□□□□ -0.27
NLRC4-201ENST00000342905 PLEKHH2Q8IVE3 1493 aa13.33□□□□□ -0.28
NLRC4-201ENST00000342905 ZFYVE16Q7Z3T8 1539 aa13.33□□□□□ -0.28
NLRC4-201ENST00000342905 KDM5CP41229 1560 aa13.32□□□□□ -0.28
NLRC4-201ENST00000342905 SAMD9LQ8IVG5 1584 aa13.32□□□□□ -0.28
NLRC4-201ENST00000342905 RRBP1Q9P2E9 1410 aaKnown RBP13.31□□□□□ -0.28
NLRC4-201ENST00000342905 KIAA1107Q9UPP5 1409 aa13.31□□□□□ -0.28
NLRC4-201ENST00000342905 PTPN23Q9H3S7 1636 aa13.31□□□□□ -0.28
NLRC4-201ENST00000342905 KDM4FA0A1W2PPD8 638 aa13.3□□□□□ -0.28
NLRC4-201ENST00000342905 ZNF777Q9ULD5 760 aaPredicted RBP13.3□□□□□ -0.28
NLRC4-201ENST00000342905 ARHGEF12Q9NZN5 1544 aa13.3□□□□□ -0.28
NLRC4-201ENST00000342905 YEATS2Q9ULM3 1422 aa13.29□□□□□ -0.28
NLRC4-201ENST00000342905 TRAPPC8Q9Y2L5 1435 aa13.29□□□□□ -0.28
NLRC4-201ENST00000342905 SYCP2Q9BX26 1530 aa13.29□□□□□ -0.28
NLRC4-201ENST00000342905 AFAP1Q8N556 730 aa13.29□□□□□ -0.28
NLRC4-201ENST00000342905 HECW2Q9P2P5 1572 aa13.29□□□□□ -0.28
NLRC4-201ENST00000342905 MLH3Q9UHC1 1453 aa13.28□□□□□ -0.28
NLRC4-201ENST00000342905 MYOM3Q5VTT5 1437 aa13.27□□□□□ -0.28
NLRC4-201ENST00000342905 FGD6Q6ZV73 1430 aa13.26□□□□□ -0.29
NLRC4-201ENST00000342905 ATP10AO60312 1499 aa13.26□□□□□ -0.29
NLRC4-201ENST00000342905 C9orf84Q5VXU9 1444 aa13.25□□□□□ -0.29
NLRC4-201ENST00000342905 CROCC2H7BZ55 1655 aa13.24□□□□□ -0.29
NLRC4-201ENST00000342905 CAMSAP2Q08AD1 1489 aa13.24□□□□□ -0.29
NLRC4-201ENST00000342905 DIP2CQ9Y2E4 1556 aa13.23□□□□□ -0.29
NLRC4-201ENST00000342905 MBD5Q9P267 1494 aa13.23□□□□□ -0.29
NLRC4-201ENST00000342905 MIA2Q96PC5 1412 aa13.23□□□□□ -0.29
NLRC4-201ENST00000342905 ARID4BQ4LE39 1312 aaPredicted RBP13.23□□□□□ -0.29
NLRC4-201ENST00000342905 ZNF644Q9H582 1327 aaPredicted RBP13.23□□□□□ -0.29
NLRC4-201ENST00000342905 HNRNPMP52272 730 aaKnown RBP eCLIP13.23□□□□□ -0.29
NLRC4-201ENST00000342905 MYT1LQ9UL68 1186 aa13.23□□□□□ -0.29
NLRC4-201ENST00000342905 REREQ9P2R6 1566 aa13.23□□□□□ -0.29
NLRC4-201ENST00000342905 SPAG9O60271 1321 aaKnown RBP13.22□□□□□ -0.29
NLRC4-201ENST00000342905 NCBP3Q53F19 620 aaKnown RBP13.22□□□□□ -0.29
NLRC4-201ENST00000342905 ABCA6Q8N139 1617 aa13.22□□□□□ -0.29
NLRC4-201ENST00000342905 TCOF1Q13428 1488 aaKnown RBP13.22□□□□□ -0.29
NLRC4-201ENST00000342905 BCORL1Q5H9F3 1711 aa13.21□□□□□ -0.29
NLRC4-201ENST00000342905 INO80Q9ULG1 1556 aaPredicted RBP13.21□□□□□ -0.29
NLRC4-201ENST00000342905 ATP7AQ04656 1500 aa13.21□□□□□ -0.29
NLRC4-201ENST00000342905 KIDINS220Q9ULH0 1771 aa13.21□□□□□ -0.3
NLRC4-201ENST00000342905 ADAMTSL3P82987 1691 aa13.21□□□□□ -0.3
NLRC4-201ENST00000342905 ADGBQ8N7X0 1667 aa13.21□□□□□ -0.3
NLRC4-201ENST00000342905 RSPH4AQ5TD94 716 aa13.2□□□□□ -0.3
NLRC4-201ENST00000342905 CCDC141Q6ZP82 1450 aa13.2□□□□□ -0.3
NLRC4-201ENST00000342905 DNMT1P26358 1616 aaKnown RBP13.2□□□□□ -0.3
NLRC4-201ENST00000342905 ARHGEF5Q12774 1597 aa13.2□□□□□ -0.3
NLRC4-201ENST00000342905 SIGLEC1Q9BZZ2 1709 aa13.19□□□□□ -0.3
NLRC4-201ENST00000342905 AGLP35573 1532 aa13.18□□□□□ -0.3
NLRC4-201ENST00000342905 RTEL1-TNFRSF6BF6WH68 1400 aa13.18□□□□□ -0.3
NLRC4-201ENST00000342905 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.17□□□□□ -0.3
NLRC4-201ENST00000342905 GCC2Q8IWJ2 1684 aa13.17□□□□□ -0.3
NLRC4-201ENST00000342905 MADDQ8WXG6 1647 aa13.16□□□□□ -0.3
NLRC4-201ENST00000342905 PTPRMP28827 1452 aa13.15□□□□□ -0.31
NLRC4-201ENST00000342905 PLXNC1O60486 1568 aa13.14□□□□□ -0.31
NLRC4-201ENST00000342905 FAM50AQ14320 339 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms