RNA–Protein interactions for RNA: ENST00000341547.8

LMO7-202, Transcript of LIM domain 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO7, Length 7,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-202ENST00000341547 VPS8Q8N3P4 1428 aa9.45□□□□□ -0.9
LMO7-202ENST00000341547 U2SURPO15042 1029 aaKnown RBP9.45□□□□□ -0.9
LMO7-202ENST00000341547 RCAN3Q9UKA8 241 aa9.44□□□□□ -0.9
LMO7-202ENST00000341547 WRNQ14191 1432 aaPredicted RBP eCLIP9.44□□□□□ -0.9
LMO7-202ENST00000341547 APBB1O00213 710 aa9.43□□□□□ -0.9
LMO7-202ENST00000341547 HSPA5P11021 654 aaKnown RBP9.43□□□□□ -0.9
LMO7-202ENST00000341547 DDX11L8A8MPP1 907 aa9.42□□□□□ -0.9
LMO7-202ENST00000341547 MCCP23508 829 aa9.41□□□□□ -0.9
LMO7-202ENST00000341547 NPM1P06748 294 aaKnown RBP eCLIP9.41□□□□□ -0.9
LMO7-202ENST00000341547 NOC3LQ8WTT2 800 aaKnown RBP9.4□□□□□ -0.9
LMO7-202ENST00000341547 CLSTN1O94985 981 aa9.4□□□□□ -0.9
LMO7-202ENST00000341547 ANO8Q9HCE9 1232 aaPredicted RBP9.4□□□□□ -0.91
LMO7-202ENST00000341547 FOXD4L1Q9NU39 408 aa9.4□□□□□ -0.91
LMO7-202ENST00000341547 PPP1R15AO75807 674 aaPredicted RBP9.4□□□□□ -0.91
LMO7-202ENST00000341547 SYAP1Q96A49 352 aaPredicted RBP9.4□□□□□ -0.91
LMO7-202ENST00000341547 PDE4AP27815 886 aa9.39□□□□□ -0.91
LMO7-202ENST00000341547 GNL2Q13823 731 aaKnown RBP9.38□□□□□ -0.91
LMO7-202ENST00000341547 RALBP1Q15311 655 aa9.38□□□□□ -0.91
LMO7-202ENST00000341547 PDE3BQ13370 1112 aa9.38□□□□□ -0.91
LMO7-202ENST00000341547 KTN1Q86UP2 1357 aaKnown RBP9.38□□□□□ -0.91
LMO7-202ENST00000341547 CALD1Q05682 793 aaKnown RBP9.37□□□□□ -0.91
LMO7-202ENST00000341547 MFAP1P55081 439 aaKnown RBP9.37□□□□□ -0.91
LMO7-202ENST00000341547 GOLGA2Q08379 1002 aa9.37□□□□□ -0.91
LMO7-202ENST00000341547 RAB3GAP2Q9H2M9 1393 aa9.37□□□□□ -0.91
LMO7-202ENST00000341547 SKOR2Q2VWA4 1001 aaPredicted RBP9.37□□□□□ -0.91
LMO7-202ENST00000341547 PMFBP1Q8TBY8 1022 aa9.37□□□□□ -0.91
LMO7-202ENST00000341547 KCNH8Q96L42 1107 aa9.37□□□□□ -0.91
LMO7-202ENST00000341547 GOLGA6L1Q8N7Z2 621 aa9.36□□□□□ -0.91
LMO7-202ENST00000341547 FHAD1B1AJZ9 1412 aa9.36□□□□□ -0.91
LMO7-202ENST00000341547 ZBED9Q6R2W3 1325 aa9.36□□□□□ -0.91
LMO7-202ENST00000341547 FAM161AQ3B820 660 aa9.36□□□□□ -0.91
LMO7-202ENST00000341547 HAP1P54257 671 aaPredicted RBP9.36□□□□□ -0.91
LMO7-202ENST00000341547 KIAA1211Q6ZU35 1233 aa9.36□□□□□ -0.91
LMO7-202ENST00000341547 FAM43AQ8N2R8 423 aa9.36□□□□□ -0.91
LMO7-202ENST00000341547 RWDD1Q9H446 243 aaPredicted RBP9.36□□□□□ -0.91
LMO7-202ENST00000341547 KIF27Q86VH2 1401 aa9.36□□□□□ -0.91
LMO7-202ENST00000341547 NPHP1O15259 732 aa9.35□□□□□ -0.91
LMO7-202ENST00000341547 PDE4CQ08493 712 aa9.35□□□□□ -0.91
LMO7-202ENST00000341547 LMOD2Q6P5Q4 547 aa9.35□□□□□ -0.91
LMO7-202ENST00000341547 DHX57Q6P158 1386 aaKnown RBP9.35□□□□□ -0.91
LMO7-202ENST00000341547 FOXD4L5Q5VV16 416 aaPredicted RBP9.35□□□□□ -0.91
LMO7-202ENST00000341547 FOXD4L4Q8WXT5 416 aaPredicted RBP9.35□□□□□ -0.91
LMO7-202ENST00000341547 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.35□□□□□ -0.91
LMO7-202ENST00000341547 SOX12O15370 315 aa9.34□□□□□ -0.91
LMO7-202ENST00000341547 SLC4A3P48751 1232 aa9.34□□□□□ -0.91
LMO7-202ENST00000341547 CENPQQ7L2Z9 268 aaPredicted RBP9.34□□□□□ -0.91
LMO7-202ENST00000341547 A0A0U1RQG5 324 aaPredicted RBP9.34□□□□□ -0.91
LMO7-202ENST00000341547 MAP7D2Q96T17 732 aa9.34□□□□□ -0.91
LMO7-202ENST00000341547 ARHGAP35Q9NRY4 1499 aa9.34□□□□□ -0.91
LMO7-202ENST00000341547 TPM2P07951 284 aa9.34□□□□□ -0.92
LMO7-202ENST00000341547 CSPP1Q1MSJ5 1256 aa9.34□□□□□ -0.92
LMO7-202ENST00000341547 NOL8Q76FK4 1167 aaKnown RBP9.33□□□□□ -0.92
LMO7-202ENST00000341547 MTERF4Q7Z6M4 381 aaKnown RBP9.33□□□□□ -0.92
LMO7-202ENST00000341547 CREBRFQ8IUR6 639 aa9.33□□□□□ -0.92
LMO7-202ENST00000341547 ISY1Q9ULR0 285 aaKnown RBP9.33□□□□□ -0.92
LMO7-202ENST00000341547 POGKQ9P215 609 aa9.32□□□□□ -0.92
LMO7-202ENST00000341547 SOGA1O94964 1423 aa9.32□□□□□ -0.92
LMO7-202ENST00000341547 PHF14O94880 888 aa9.32□□□□□ -0.92
LMO7-202ENST00000341547 ZNF771Q7L3S4 317 aaPredicted RBP9.32□□□□□ -0.92
LMO7-202ENST00000341547 PHLDB1Q86UU1 1377 aa9.32□□□□□ -0.92
LMO7-202ENST00000341547 DCAF11Q8TEB1 546 aa9.32□□□□□ -0.92
LMO7-202ENST00000341547 TMF1P82094 1093 aa9.31□□□□□ -0.92
LMO7-202ENST00000341547 ITPRIPQ8IWB1 547 aa9.31□□□□□ -0.92
LMO7-202ENST00000341547 FOXD4L6Q3SYB3 417 aaPredicted RBP9.31□□□□□ -0.92
LMO7-202ENST00000341547 FOXD4L3Q6VB84 417 aaPredicted RBP9.31□□□□□ -0.92
LMO7-202ENST00000341547 ROCK2O75116 1388 aaKnown RBP9.31□□□□□ -0.92
LMO7-202ENST00000341547 RRP1P56182 461 aaKnown RBP9.31□□□□□ -0.92
LMO7-202ENST00000341547 PODXL2Q9NZ53 605 aa9.3□□□□□ -0.92
LMO7-202ENST00000341547 HSP90B1P14625 803 aaKnown RBP9.3□□□□□ -0.92
LMO7-202ENST00000341547 FAM13BQ9NYF5 915 aa9.3□□□□□ -0.92
LMO7-202ENST00000341547 TRIM6-TRIM34B2RNG4 842 aa9.29□□□□□ -0.92
LMO7-202ENST00000341547 TPM4P67936 248 aa9.29□□□□□ -0.92
LMO7-202ENST00000341547 NFKBIBQ15653 356 aa9.29□□□□□ -0.92
LMO7-202ENST00000341547 CCAR2Q8N163 923 aaKnown RBP9.29□□□□□ -0.92
LMO7-202ENST00000341547 IL27Q8NEV9 243 aa9.29□□□□□ -0.92
LMO7-202ENST00000341547 CFDP1Q9UEE9 299 aaPredicted RBP9.28□□□□□ -0.92
LMO7-202ENST00000341547 MORC1Q86VD1 984 aa9.28□□□□□ -0.92
LMO7-202ENST00000341547 SAFB2Q14151 953 aaKnown RBP eCLIP9.28□□□□□ -0.92
LMO7-202ENST00000341547 CLUAP1Q96AJ1 413 aa9.27□□□□□ -0.93
LMO7-202ENST00000341547 PATL2C9JE40 543 aaKnown RBP9.27□□□□□ -0.93
LMO7-202ENST00000341547 CHMP7Q8WUX9 453 aaPredicted RBP9.27□□□□□ -0.93
LMO7-202ENST00000341547 UBE2Q2Q8WVN8 375 aa9.27□□□□□ -0.93
LMO7-202ENST00000341547 IPO8O15397 1037 aaKnown RBP9.27□□□□□ -0.93
LMO7-202ENST00000341547 SETQ01105 290 aaPredicted RBP9.27□□□□□ -0.93
LMO7-202ENST00000341547 HTATSF1O43719 755 aaKnown RBP9.26□□□□□ -0.93
LMO7-202ENST00000341547 KIF15Q9NS87 1388 aa9.26□□□□□ -0.93
LMO7-202ENST00000341547 ZNF592Q92610 1267 aa9.26□□□□□ -0.93
LMO7-202ENST00000341547 DDX49Q9Y6V7 483 aaKnown RBP9.26□□□□□ -0.93
LMO7-202ENST00000341547 PLEKHD1A6NEE1 506 aa9.26□□□□□ -0.93
LMO7-202ENST00000341547 RRP9O43818 475 aaKnown RBP9.26□□□□□ -0.93
LMO7-202ENST00000341547 MRE11P49959 708 aa9.26□□□□□ -0.93
LMO7-202ENST00000341547 FOXD1Q16676 465 aa9.26□□□□□ -0.93
LMO7-202ENST00000341547 EXOC6Q8TAG9 804 aa9.26□□□□□ -0.93
LMO7-202ENST00000341547 BCL11BQ9C0K0 894 aaPredicted RBP9.26□□□□□ -0.93
LMO7-202ENST00000341547 BRPF3Q9ULD4 1205 aa9.25□□□□□ -0.93
LMO7-202ENST00000341547 SRPK2P78362 688 aaKnown RBP9.25□□□□□ -0.93
LMO7-202ENST00000341547 BAZ1AQ9NRL2 1556 aaPredicted RBP9.25□□□□□ -0.93
LMO7-202ENST00000341547 BAZ1BQ9UIG0 1483 aaKnown RBP9.25□□□□□ -0.93
LMO7-202ENST00000341547 RTF1Q92541 710 aaKnown RBP9.25□□□□□ -0.93
LMO7-202ENST00000341547 FMN1Q68DA7 1419 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms