RNA–Protein interactions for RNA: ENST00000341181.10

CLDND1-201, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-201ENST00000341181 ARHGAP5Q13017 1502 aa31.46■■■□□ 2.63
CLDND1-201ENST00000341181 PLCH2O75038 1416 aa31.45■■■□□ 2.63
CLDND1-201ENST00000341181 TCOF1Q13428 1488 aaKnown RBP31.44■■■□□ 2.62
CLDND1-201ENST00000341181 GLI2P10070 1586 aa31.43■■■□□ 2.62
CLDND1-201ENST00000341181 ZNF777Q9ULD5 760 aaPredicted RBP31.43■■■□□ 2.62
CLDND1-201ENST00000341181 CAMSAP2Q08AD1 1489 aa31.42■■■□□ 2.62
CLDND1-201ENST00000341181 FAM69CQ0P6D2 419 aa31.41■■■□□ 2.62
CLDND1-201ENST00000341181 CD109Q6YHK3 1445 aa31.41■■■□□ 2.62
CLDND1-201ENST00000341181 MAP3K4Q9Y6R4 1608 aa31.41■■■□□ 2.62
CLDND1-201ENST00000341181 SAMD9LQ8IVG5 1584 aa31.4■■■□□ 2.62
CLDND1-201ENST00000341181 KIF13AQ9H1H9 1805 aa31.4■■■□□ 2.62
CLDND1-201ENST00000341181 ARAP3Q8WWN8 1544 aa31.38■■■□□ 2.61
CLDND1-201ENST00000341181 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.35■■■□□ 2.61
CLDND1-201ENST00000341181 ITGAEP38570 1179 aa31.34■■■□□ 2.61
CLDND1-201ENST00000341181 FANCAO15360 1455 aa31.34■■■□□ 2.61
CLDND1-201ENST00000341181 SYCP2Q9BX26 1530 aa31.29■■■□□ 2.6
CLDND1-201ENST00000341181 EFCAB2Q5VUJ9 269 aa31.29■■■□□ 2.6
CLDND1-201ENST00000341181 PTPRKQ15262 1439 aa31.27■■■□□ 2.6
CLDND1-201ENST00000341181 TSPOAP1O95153 1857 aa31.27■■■□□ 2.6
CLDND1-201ENST00000341181 ABCC1P33527 1531 aa31.26■■■□□ 2.6
CLDND1-201ENST00000341181 PPRC1Q5VV67 1664 aaKnown RBP31.26■■■□□ 2.6
CLDND1-201ENST00000341181 ARHGEF12Q9NZN5 1544 aa31.26■■■□□ 2.59
CLDND1-201ENST00000341181 DNMT1P26358 1616 aaKnown RBP31.25■■■□□ 2.59
CLDND1-201ENST00000341181 MBD5Q9P267 1494 aa31.24■■■□□ 2.59
CLDND1-201ENST00000341181 HNRNPMP52272 730 aaKnown RBP eCLIP31.23■■■□□ 2.59
CLDND1-201ENST00000341181 DAPK1P53355 1430 aa31.22■■■□□ 2.59
CLDND1-201ENST00000341181 ABCC5O15440 1437 aa31.22■■■□□ 2.59
CLDND1-201ENST00000341181 AKNAQ7Z591 1439 aa31.2■■■□□ 2.58
CLDND1-201ENST00000341181 ADGRL1O94910 1474 aa31.19■■■□□ 2.58
CLDND1-201ENST00000341181 CFAP74Q9C0B2 1584 aa31.18■■■□□ 2.58
CLDND1-201ENST00000341181 KIAA1107Q9UPP5 1409 aa31.18■■■□□ 2.58
CLDND1-201ENST00000341181 PLEKHH2Q8IVE3 1493 aa31.18■■■□□ 2.58
CLDND1-201ENST00000341181 ARHGEF5Q12774 1597 aa31.17■■■□□ 2.58
CLDND1-201ENST00000341181 CROCC2H7BZ55 1655 aa31.16■■■□□ 2.58
CLDND1-201ENST00000341181 TRHP20396 242 aaPredicted RBP31.15■■■□□ 2.58
CLDND1-201ENST00000341181 NEO1Q92859 1461 aa31.15■■■□□ 2.58
CLDND1-201ENST00000341181 TRAPPC8Q9Y2L5 1435 aa31.14■■■□□ 2.58
CLDND1-201ENST00000341181 CCDC141Q6ZP82 1450 aa31.14■■■□□ 2.58
CLDND1-201ENST00000341181 CHIC2Q9UKJ5 165 aa31.13■■■□□ 2.57
CLDND1-201ENST00000341181 SCAPERQ9BY12 1400 aa31.13■■■□□ 2.57
CLDND1-201ENST00000341181 TEX14Q8IWB6 1497 aa31.09■■■□□ 2.57
CLDND1-201ENST00000341181 AFAP1Q8N556 730 aa31.06■■■□□ 2.56
CLDND1-201ENST00000341181 C9orf84Q5VXU9 1444 aa31.06■■■□□ 2.56
CLDND1-201ENST00000341181 SHANK2Q9UPX8 1470 aa31.06■■■□□ 2.56
CLDND1-201ENST00000341181 POGZQ7Z3K3 1410 aa31.03■■■□□ 2.56
CLDND1-201ENST00000341181 ADGBQ8N7X0 1667 aa30.99■■■□□ 2.55
CLDND1-201ENST00000341181 RSPH4AQ5TD94 716 aa30.99■■■□□ 2.55
CLDND1-201ENST00000341181 RRP7BPQ9NSQ0 103 aa30.99■■■□□ 2.55
CLDND1-201ENST00000341181 ZNF518AQ6AHZ1 1483 aa30.99■■■□□ 2.55
CLDND1-201ENST00000341181 RAPGEF3O95398 923 aa30.99■■■□□ 2.55
CLDND1-201ENST00000341181 TSPY4P0CV99 314 aa30.99■■■□□ 2.55
CLDND1-201ENST00000341181 TSPY10P0CW01 314 aa30.99■■■□□ 2.55
CLDND1-201ENST00000341181 ADGRL2O95490 1459 aa30.98■■■□□ 2.55
CLDND1-201ENST00000341181 DENND4BO75064 1496 aaPredicted RBP30.98■■■□□ 2.55
CLDND1-201ENST00000341181 MAST1Q9Y2H9 1570 aa30.97■■■□□ 2.55
CLDND1-201ENST00000341181 HFM1A2PYH4 1435 aa30.97■■■□□ 2.55
CLDND1-201ENST00000341181 FRMPD1Q5SYB0 1578 aa30.96■■■□□ 2.55
CLDND1-201ENST00000341181 RICTORQ6R327 1708 aa30.96■■■□□ 2.55
CLDND1-201ENST00000341181 NCOA1Q15788 1441 aa30.96■■■□□ 2.55
CLDND1-201ENST00000341181 ZFYVE16Q7Z3T8 1539 aa30.96■■■□□ 2.55
CLDND1-201ENST00000341181 ROCK1Q13464 1354 aa30.96■■■□□ 2.55
CLDND1-201ENST00000341181 KDM5CP41229 1560 aa30.95■■■□□ 2.55
CLDND1-201ENST00000341181 NAIPQ13075 1403 aa30.95■■■□□ 2.55
CLDND1-201ENST00000341181 COL17A1Q9UMD9 1497 aaPredicted RBP30.95■■■□□ 2.55
CLDND1-201ENST00000341181 INO80Q9ULG1 1556 aaPredicted RBP30.93■■■□□ 2.54
CLDND1-201ENST00000341181 SPAG9O60271 1321 aaKnown RBP30.92■■■□□ 2.54
CLDND1-201ENST00000341181 GCC2Q8IWJ2 1684 aa30.91■■■□□ 2.54
CLDND1-201ENST00000341181 ANKRD30AQ9BXX3 1397 aa30.9■■■□□ 2.54
CLDND1-201ENST00000341181 ATP7AQ04656 1500 aa30.9■■■□□ 2.54
CLDND1-201ENST00000341181 SETD5Q9C0A6 1442 aa30.89■■■□□ 2.54
CLDND1-201ENST00000341181 KDM6BO15054 1643 aa30.89■■■□□ 2.53
CLDND1-201ENST00000341181 RAB3GAP2Q9H2M9 1393 aa30.88■■■□□ 2.53
CLDND1-201ENST00000341181 PLXNC1O60486 1568 aa30.88■■■□□ 2.53
CLDND1-201ENST00000341181 KIF15Q9NS87 1388 aa30.87■■■□□ 2.53
CLDND1-201ENST00000341181 KIDINS220Q9ULH0 1771 aa30.87■■■□□ 2.53
CLDND1-201ENST00000341181 HECW2Q9P2P5 1572 aa30.86■■■□□ 2.53
CLDND1-201ENST00000341181 RTEL1-TNFRSF6BF6WH68 1400 aa30.85■■■□□ 2.53
CLDND1-201ENST00000341181 MLH3Q9UHC1 1453 aa30.82■■■□□ 2.52
CLDND1-201ENST00000341181 ZMYM4Q5VZL5 1548 aa30.8■■■□□ 2.52
CLDND1-201ENST00000341181 MYT1LQ9UL68 1186 aa30.8■■■□□ 2.52
CLDND1-201ENST00000341181 HRCP23327 699 aa30.79■■■□□ 2.52
CLDND1-201ENST00000341181 ABCA6Q8N139 1617 aa30.78■■■□□ 2.52
CLDND1-201ENST00000341181 ANKRD50Q9ULJ7 1429 aa30.77■■■□□ 2.52
CLDND1-201ENST00000341181 YEATS2Q9ULM3 1422 aa30.77■■■□□ 2.52
CLDND1-201ENST00000341181 DUOX2Q9NRD8 1548 aa30.73■■■□□ 2.51
CLDND1-201ENST00000341181 DIP2CQ9Y2E4 1556 aa30.72■■■□□ 2.51
CLDND1-201ENST00000341181 ERBINQ96RT1 1412 aa30.66■■■□□ 2.5
CLDND1-201ENST00000341181 MAGI2Q86UL8 1455 aa30.66■■■□□ 2.5
CLDND1-201ENST00000341181 A2MP01023 1474 aa30.64■■■□□ 2.5
CLDND1-201ENST00000341181 ARHGEF40Q8TER5 1519 aa30.63■■■□□ 2.49
CLDND1-201ENST00000341181 DHX29Q7Z478 1369 aaKnown RBP30.62■■■□□ 2.49
CLDND1-201ENST00000341181 DHX57Q6P158 1386 aaKnown RBP30.56■■■□□ 2.48
CLDND1-201ENST00000341181 SIGLEC1Q9BZZ2 1709 aa30.56■■■□□ 2.48
CLDND1-201ENST00000341181 TRIM52Q96A61 297 aa30.55■■■□□ 2.48
CLDND1-201ENST00000341181 ATP10AO60312 1499 aa30.55■■■□□ 2.48
CLDND1-201ENST00000341181 EIF2AK4Q9P2K8 1649 aaKnown RBP30.55■■■□□ 2.48
CLDND1-201ENST00000341181 UNC13BO14795 1591 aa30.53■■■□□ 2.48
CLDND1-201ENST00000341181 KIF3BO15066 747 aa30.51■■■□□ 2.48
CLDND1-201ENST00000341181 DEPDC5O75140 1603 aa30.49■■■□□ 2.47
CLDND1-201ENST00000341181 MROH1Q8NDA8 1641 aa30.49■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms