RNA–Protein interactions for RNA: ENST00000341037.8

TNC-201, Transcript of tenascin C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNC, Length 6,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-201ENST00000341037 FOXD1Q16676 465 aa14.58□□□□□ -0.08
TNC-201ENST00000341037 HSCBQ8IWL3 235 aa14.57□□□□□ -0.08
TNC-201ENST00000341037 CUX2O14529 1486 aa14.57□□□□□ -0.08
TNC-201ENST00000341037 ZNF330Q9Y3S2 320 aaPredicted RBP14.56□□□□□ -0.08
TNC-201ENST00000341037 GOLGA6L4A6NEF3 574 aa14.55□□□□□ -0.08
TNC-201ENST00000341037 FHAD1B1AJZ9 1412 aa14.54□□□□□ -0.08
TNC-201ENST00000341037 CARMIL1Q5VZK9 1371 aa14.53□□□□□ -0.08
TNC-201ENST00000341037 MCCP23508 829 aa14.53□□□□□ -0.08
TNC-201ENST00000341037 HSPA5P11021 654 aaKnown RBP14.53□□□□□ -0.08
TNC-201ENST00000341037 CSB-PGBD3P0DP91 1061 aa14.52□□□□□ -0.08
TNC-201ENST00000341037 HDGFL2Q7Z4V5 671 aaPredicted RBP14.52□□□□□ -0.08
TNC-201ENST00000341037 ARHGAP35Q9NRY4 1499 aa14.51□□□□□ -0.09
TNC-201ENST00000341037 GNL2Q13823 731 aaKnown RBP14.51□□□□□ -0.09
TNC-201ENST00000341037 PKD2Q13563 968 aa14.5□□□□□ -0.09
TNC-201ENST00000341037 DRC7Q8IY82 874 aa14.5□□□□□ -0.09
TNC-201ENST00000341037 ROCK2O75116 1388 aaKnown RBP14.49□□□□□ -0.09
TNC-201ENST00000341037 KTN1Q86UP2 1357 aaKnown RBP14.49□□□□□ -0.09
TNC-201ENST00000341037 ERICH6BQ5W0A0 696 aa14.48□□□□□ -0.09
TNC-201ENST00000341037 SOGA1O94964 1423 aa14.48□□□□□ -0.09
TNC-201ENST00000341037 BAZ1AQ9NRL2 1556 aaPredicted RBP14.47□□□□□ -0.09
TNC-201ENST00000341037 NUTM2DQ5VT03 806 aaPredicted RBP14.47□□□□□ -0.09
TNC-201ENST00000341037 ITPRIPQ8IWB1 547 aa14.47□□□□□ -0.09
TNC-201ENST00000341037 CCDC9Q9Y3X0 531 aaKnown RBP14.47□□□□□ -0.09
TNC-201ENST00000341037 SETD5Q9C0A6 1442 aa14.47□□□□□ -0.09
TNC-201ENST00000341037 NRDCO43847 1150 aa14.46□□□□□ -0.1
TNC-201ENST00000341037 U2AF1L5P0DN76 240 aaPredicted RBP14.45□□□□□ -0.1
TNC-201ENST00000341037 U2AF1Q01081 240 aaKnown RBP eCLIP14.45□□□□□ -0.1
TNC-201ENST00000341037 CHMP3Q9Y3E7 222 aa14.44□□□□□ -0.1
TNC-201ENST00000341037 KIAA1211Q6ZU35 1233 aa14.43□□□□□ -0.1
TNC-201ENST00000341037 ABCC8Q09428 1581 aa14.43□□□□□ -0.1
TNC-201ENST00000341037 AMER1Q5JTC6 1135 aaPredicted RBP14.42□□□□□ -0.1
TNC-201ENST00000341037 IPO8O15397 1037 aaKnown RBP14.41□□□□□ -0.1
TNC-201ENST00000341037 MSNP26038 577 aaKnown RBP14.41□□□□□ -0.1
TNC-201ENST00000341037 CHAF1AQ13111 956 aaPredicted RBP14.41□□□□□ -0.1
TNC-201ENST00000341037 CECR2Q9BXF3 1484 aa14.41□□□□□ -0.1
TNC-201ENST00000341037 CARMIL2Q6F5E8 1435 aa14.4□□□□□ -0.11
TNC-201ENST00000341037 KANK4Q5T7N3 995 aaPredicted RBP14.39□□□□□ -0.11
TNC-201ENST00000341037 CCDC146Q8IYE0 955 aa14.38□□□□□ -0.11
TNC-201ENST00000341037 NUP155O75694 1391 aa14.38□□□□□ -0.11
TNC-201ENST00000341037 GORABQ5T7V8 394 aa14.37□□□□□ -0.11
TNC-201ENST00000341037 TMX4Q9H1E5 349 aaPredicted RBP14.37□□□□□ -0.11
TNC-201ENST00000341037 MPHOSPH9Q99550 1183 aa14.37□□□□□ -0.11
TNC-201ENST00000341037 HSP90B1P14625 803 aaKnown RBP14.37□□□□□ -0.11
TNC-201ENST00000341037 TAF7LQ5H9L4 462 aa14.37□□□□□ -0.11
TNC-201ENST00000341037 CALD1Q05682 793 aaKnown RBP14.36□□□□□ -0.11
TNC-201ENST00000341037 RCAN3Q9UKA8 241 aa14.36□□□□□ -0.11
TNC-201ENST00000341037 SPAG9O60271 1321 aaKnown RBP14.36□□□□□ -0.11
TNC-201ENST00000341037 CCER2I3L3R5 266 aa14.36□□□□□ -0.11
TNC-201ENST00000341037 HNRNPMP52272 730 aaKnown RBP eCLIP14.36□□□□□ -0.11
TNC-201ENST00000341037 CFAP44Q96MT7 982 aa14.35□□□□□ -0.11
TNC-201ENST00000341037 GZF1Q9H116 711 aaPredicted RBP14.35□□□□□ -0.11
TNC-201ENST00000341037 NUTM2FA1L443 756 aa14.35□□□□□ -0.11
TNC-201ENST00000341037 LTV1Q96GA3 475 aaPredicted RBP14.35□□□□□ -0.11
TNC-201ENST00000341037 TRIM6-TRIM34B2RNG4 842 aa14.35□□□□□ -0.11
TNC-201ENST00000341037 L1TD1Q5T7N2 865 aaKnown RBP14.35□□□□□ -0.11
TNC-201ENST00000341037 EIF3AQ14152 1382 aaKnown RBP14.35□□□□□ -0.11
TNC-201ENST00000341037 SLC4A10Q6U841 1118 aa14.35□□□□□ -0.11
TNC-201ENST00000341037 KIF3BO15066 747 aa14.34□□□□□ -0.11
TNC-201ENST00000341037 MFAP1P55081 439 aaKnown RBP14.34□□□□□ -0.11
TNC-201ENST00000341037 RWDD1Q9H446 243 aaPredicted RBP14.34□□□□□ -0.11
TNC-201ENST00000341037 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.34□□□□□ -0.11
TNC-201ENST00000341037 STK31Q9BXU1 1019 aa14.34□□□□□ -0.11
TNC-201ENST00000341037 SMC4Q9NTJ3 1288 aa14.33□□□□□ -0.11
TNC-201ENST00000341037 NOL8Q76FK4 1167 aaKnown RBP14.33□□□□□ -0.12
TNC-201ENST00000341037 SLKQ9H2G2 1235 aaPredicted RBP14.33□□□□□ -0.12
TNC-201ENST00000341037 ANKRD30AQ9BXX3 1397 aa14.32□□□□□ -0.12
TNC-201ENST00000341037 KIAA2012Q0VF49 1180 aa14.32□□□□□ -0.12
TNC-201ENST00000341037 RAB3GAP2Q9H2M9 1393 aa14.32□□□□□ -0.12
TNC-201ENST00000341037 G3V3G9 751 aa14.32□□□□□ -0.12
TNC-201ENST00000341037 DCAF8Q5TAQ9 597 aa14.32□□□□□ -0.12
TNC-201ENST00000341037 NGDNQ8NEJ9 315 aaKnown RBP14.32□□□□□ -0.12
TNC-201ENST00000341037 RALBP1Q15311 655 aa14.31□□□□□ -0.12
TNC-201ENST00000341037 GPATCH3Q96I76 525 aa14.31□□□□□ -0.12
TNC-201ENST00000341037 FOXD4L1Q9NU39 408 aa14.31□□□□□ -0.12
TNC-201ENST00000341037 TDRD9Q8NDG6 1382 aaKnown RBP14.31□□□□□ -0.12
TNC-201ENST00000341037 EFCAB2Q5VUJ9 269 aa14.31□□□□□ -0.12
TNC-201ENST00000341037 CCDC88BA6NC98 1476 aa14.31□□□□□ -0.12
TNC-201ENST00000341037 VPS8Q8N3P4 1428 aa14.31□□□□□ -0.12
TNC-201ENST00000341037 DEKP35659 375 aaKnown RBP14.3□□□□□ -0.12
TNC-201ENST00000341037 EID1Q9Y6B2 187 aa14.3□□□□□ -0.12
TNC-201ENST00000341037 ARID3AQ99856 593 aa14.3□□□□□ -0.12
TNC-201ENST00000341037 PDE4CQ08493 712 aa14.3□□□□□ -0.12
TNC-201ENST00000341037 AMPHP49418 695 aa14.3□□□□□ -0.12
TNC-201ENST00000341037 GBP4Q96PP9 640 aa14.3□□□□□ -0.12
TNC-201ENST00000341037 CLUAP1Q96AJ1 413 aa14.29□□□□□ -0.12
TNC-201ENST00000341037 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.29□□□□□ -0.12
TNC-201ENST00000341037 PMFBP1Q8TBY8 1022 aa14.28□□□□□ -0.12
TNC-201ENST00000341037 TERF2IPQ9NYB0 399 aa14.28□□□□□ -0.12
TNC-201ENST00000341037 TIMELESSQ9UNS1 1208 aa14.28□□□□□ -0.12
TNC-201ENST00000341037 RBM19Q9Y4C8 960 aaKnown RBP14.28□□□□□ -0.12
TNC-201ENST00000341037 NOC3LQ8WTT2 800 aaKnown RBP14.28□□□□□ -0.12
TNC-201ENST00000341037 WASHC2CQ9Y4E1 1318 aa14.28□□□□□ -0.12
TNC-201ENST00000341037 CREBRFQ8IUR6 639 aa14.27□□□□□ -0.13
TNC-201ENST00000341037 PDS5BQ9NTI5 1447 aa14.27□□□□□ -0.13
TNC-201ENST00000341037 FMN1Q68DA7 1419 aa14.25□□□□□ -0.13
TNC-201ENST00000341037 TOMM22Q9NS69 142 aa14.25□□□□□ -0.13
TNC-201ENST00000341037 RASSF8Q8NHQ8 419 aa14.25□□□□□ -0.13
TNC-201ENST00000341037 RRP7AQ9Y3A4 280 aaKnown RBP14.25□□□□□ -0.13
TNC-201ENST00000341037 HTATSF1O43719 755 aaKnown RBP14.25□□□□□ -0.13
TNC-201ENST00000341037 TRAK1Q9UPV9 953 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms