RNA–Protein interactions for RNA: ENST00000340513.4

TPX2-202, Transcript of TPX2, microtubule nucleation factor, humanhuman

TSL 1 (best) BASIC

Gene TPX2, Length 3,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPX2-202ENST00000340513 PPP4R3BQ5MIZ7 849 aa15.59■□□□□ 0.09
TPX2-202ENST00000340513 TRIM44Q96DX7 344 aaPredicted RBP15.59■□□□□ 0.09
TPX2-202ENST00000340513 HMGXB3Q12766 1538 aa15.59■□□□□ 0.09
TPX2-202ENST00000340513 TEX2Q8IWB9 1127 aa15.58■□□□□ 0.09
TPX2-202ENST00000340513 POGKQ9P215 609 aa15.58■□□□□ 0.09
TPX2-202ENST00000340513 APPP05067 770 aa15.58■□□□□ 0.08
TPX2-202ENST00000340513 PDE4AP27815 886 aa15.58■□□□□ 0.08
TPX2-202ENST00000340513 PATL2C9JE40 543 aaKnown RBP15.57■□□□□ 0.08
TPX2-202ENST00000340513 GZF1Q9H116 711 aaPredicted RBP15.57■□□□□ 0.08
TPX2-202ENST00000340513 TMEM51Q9NW97 253 aa15.57■□□□□ 0.08
TPX2-202ENST00000340513 CCER2I3L3R5 266 aa15.56■□□□□ 0.08
TPX2-202ENST00000340513 FAM9BQ8IZU0 186 aa15.56■□□□□ 0.08
TPX2-202ENST00000340513 KIAA1211Q6ZU35 1233 aa15.56■□□□□ 0.08
TPX2-202ENST00000340513 IRX3P78415 501 aaPredicted RBP15.54■□□□□ 0.08
TPX2-202ENST00000340513 CENPJQ9HC77 1338 aaPredicted RBP15.54■□□□□ 0.08
TPX2-202ENST00000340513 SMAP1Q8IYB5 467 aaPredicted RBP15.53■□□□□ 0.08
TPX2-202ENST00000340513 P3H3Q8IVL6 736 aa15.52■□□□□ 0.08
TPX2-202ENST00000340513 ZBTB22O15209 634 aa15.52■□□□□ 0.07
TPX2-202ENST00000340513 GOLGA6L3A6NEY3 463 aa15.5■□□□□ 0.07
TPX2-202ENST00000340513 PANK2Q9BZ23 570 aa15.5■□□□□ 0.07
TPX2-202ENST00000340513 ESPNB1AK53 854 aa15.49■□□□□ 0.07
TPX2-202ENST00000340513 TOP2AP11388 1531 aaKnown RBP15.49■□□□□ 0.07
TPX2-202ENST00000340513 CGNQ9P2M7 1197 aaKnown RBP15.47■□□□□ 0.07
TPX2-202ENST00000340513 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.46■□□□□ 0.07
TPX2-202ENST00000340513 CEP162Q5TB80 1403 aa15.45■□□□□ 0.06
TPX2-202ENST00000340513 MYH16Q9H6N6 1097 aa15.45■□□□□ 0.06
TPX2-202ENST00000340513 MAP7D2Q96T17 732 aa15.45■□□□□ 0.06
TPX2-202ENST00000340513 BCCIPQ9P287 314 aaKnown RBP eCLIP15.45■□□□□ 0.06
TPX2-202ENST00000340513 CCDC88BA6NC98 1476 aa15.44■□□□□ 0.06
TPX2-202ENST00000340513 KCNG1Q9UIX4 513 aa15.43■□□□□ 0.06
TPX2-202ENST00000340513 XRCC6P12956 609 aaKnown RBP eCLIP15.43■□□□□ 0.06
TPX2-202ENST00000340513 PPP1R15AO75807 674 aaPredicted RBP15.42■□□□□ 0.06
TPX2-202ENST00000340513 DHX57Q6P158 1386 aaKnown RBP15.41■□□□□ 0.06
TPX2-202ENST00000340513 TCERG1O14776 1098 aaKnown RBP15.41■□□□□ 0.06
TPX2-202ENST00000340513 ERCC6Q03468 1493 aa15.41■□□□□ 0.06
TPX2-202ENST00000340513 ZBTB9Q96C00 473 aa15.41■□□□□ 0.06
TPX2-202ENST00000340513 R3HCC1Q9Y3T6 440 aaKnown RBP15.41■□□□□ 0.06
TPX2-202ENST00000340513 BACH2Q9BYV9 841 aa15.4■□□□□ 0.06
TPX2-202ENST00000340513 RGS22Q8NE09 1264 aa15.39■□□□□ 0.05
TPX2-202ENST00000340513 HDAC5Q9UQL6 1122 aa15.39■□□□□ 0.05
TPX2-202ENST00000340513 SLKQ9H2G2 1235 aaPredicted RBP15.39■□□□□ 0.05
TPX2-202ENST00000340513 CHMP4CQ96CF2 233 aa15.38■□□□□ 0.05
TPX2-202ENST00000340513 DMTNQ08495 405 aa15.38■□□□□ 0.05
TPX2-202ENST00000340513 TMC1Q8TDI8 760 aa15.38■□□□□ 0.05
TPX2-202ENST00000340513 IGSF3O75054 1194 aa15.37■□□□□ 0.05
TPX2-202ENST00000340513 MYCNP04198 464 aaPredicted RBP15.37■□□□□ 0.05
TPX2-202ENST00000340513 FAM193AP78312 1265 aa15.36■□□□□ 0.05
TPX2-202ENST00000340513 CADPSQ9ULU8 1353 aa15.36■□□□□ 0.05
TPX2-202ENST00000340513 SKAP1Q86WV1 359 aa15.36■□□□□ 0.05
TPX2-202ENST00000340513 CBX1P83916 185 aa15.36■□□□□ 0.05
TPX2-202ENST00000340513 ZBTB7CA1YPR0 619 aa15.35■□□□□ 0.05
TPX2-202ENST00000340513 EEA1Q15075 1411 aa15.34■□□□□ 0.05
TPX2-202ENST00000340513 SOX12O15370 315 aa15.33■□□□□ 0.04
TPX2-202ENST00000340513 HSP90B1P14625 803 aaKnown RBP15.33■□□□□ 0.04
TPX2-202ENST00000340513 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.31■□□□□ 0.04
TPX2-202ENST00000340513 RNF216Q9NWF9 866 aaPredicted RBP15.31■□□□□ 0.04
TPX2-202ENST00000340513 MSNP26038 577 aaKnown RBP15.31■□□□□ 0.04
TPX2-202ENST00000340513 UTP14CQ5TAP6 766 aaKnown RBP15.31■□□□□ 0.04
TPX2-202ENST00000340513 CFAP44Q96MT7 982 aa15.31■□□□□ 0.04
TPX2-202ENST00000340513 RIPK4P57078 832 aa15.3■□□□□ 0.04
TPX2-202ENST00000340513 CCDC184Q52MB2 194 aa15.29■□□□□ 0.04
TPX2-202ENST00000340513 TMED8Q6PL24 325 aaPredicted RBP15.29■□□□□ 0.04
TPX2-202ENST00000340513 ZNF771Q7L3S4 317 aaPredicted RBP15.29■□□□□ 0.04
TPX2-202ENST00000340513 CNKSR2Q8WXI2 1034 aa15.29■□□□□ 0.04
TPX2-202ENST00000340513 ERBB4Q15303 1308 aa15.29■□□□□ 0.04
TPX2-202ENST00000340513 UQCRHLA0A096LP55 91 aa15.29■□□□□ 0.04
TPX2-202ENST00000340513 UQCRHP07919 91 aa15.29■□□□□ 0.04
TPX2-202ENST00000340513 CHRM1P11229 460 aaPredicted RBP15.29■□□□□ 0.04
TPX2-202ENST00000340513 KCNJ4P48050 445 aa15.29■□□□□ 0.04
TPX2-202ENST00000340513 MRS2Q9HD23 443 aa15.29■□□□□ 0.04
TPX2-202ENST00000340513 KIF20AO95235 890 aa15.28■□□□□ 0.04
TPX2-202ENST00000340513 KIF21AQ7Z4S6 1674 aa15.28■□□□□ 0.04
TPX2-202ENST00000340513 WRNQ14191 1432 aaPredicted RBP eCLIP15.28■□□□□ 0.04
TPX2-202ENST00000340513 ZSCAN20P17040 1043 aaPredicted RBP15.26■□□□□ 0.03
TPX2-202ENST00000340513 AKNAQ7Z591 1439 aa15.26■□□□□ 0.03
TPX2-202ENST00000340513 NGEFQ8N5V2 710 aa15.26■□□□□ 0.03
TPX2-202ENST00000340513 MTERF4Q7Z6M4 381 aaKnown RBP15.25■□□□□ 0.03
TPX2-202ENST00000340513 LAMC3Q9Y6N6 1575 aa15.25■□□□□ 0.03
TPX2-202ENST00000340513 CFTRP13569 1480 aa15.25■□□□□ 0.03
TPX2-202ENST00000340513 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.25■□□□□ 0.03
TPX2-202ENST00000340513 CLGNO14967 610 aa15.24■□□□□ 0.03
TPX2-202ENST00000340513 LETM1O95202 739 aaPredicted RBP15.24■□□□□ 0.03
TPX2-202ENST00000340513 SPRYD3Q8NCJ5 442 aa15.23■□□□□ 0.03
TPX2-202ENST00000340513 PTMSP20962 102 aa15.23■□□□□ 0.03
TPX2-202ENST00000340513 FANCD2Q9BXW9 1451 aa15.23■□□□□ 0.03
TPX2-202ENST00000340513 PDS5BQ9NTI5 1447 aa15.22■□□□□ 0.03
TPX2-202ENST00000340513 MRE11P49959 708 aa15.22■□□□□ 0.03
TPX2-202ENST00000340513 ZNF526Q8TF50 670 aaPredicted RBP15.21■□□□□ 0.03
TPX2-202ENST00000340513 TNNT3P45378 269 aaPredicted RBP15.21■□□□□ 0.03
TPX2-202ENST00000340513 GTPBP4Q9BZE4 634 aaKnown RBP15.21■□□□□ 0.03
TPX2-202ENST00000340513 SLC52A1Q9NWF4 448 aa15.21■□□□□ 0.02
TPX2-202ENST00000340513 TAF3Q5VWG9 929 aa15.2■□□□□ 0.02
TPX2-202ENST00000340513 CCDC94Q9BW85 323 aaPredicted RBP15.19■□□□□ 0.02
TPX2-202ENST00000340513 CC2D1BQ5T0F9 858 aaKnown RBP15.19■□□□□ 0.02
TPX2-202ENST00000340513 EXOC6Q8TAG9 804 aa15.19■□□□□ 0.02
TPX2-202ENST00000340513 MS4A1P11836 297 aa15.19■□□□□ 0.02
TPX2-202ENST00000340513 PTMAP06454 111 aaKnown RBP15.18■□□□□ 0.02
TPX2-202ENST00000340513 TRERF1Q96PN7 1200 aa15.18■□□□□ 0.02
TPX2-202ENST00000340513 GRPEL1Q9HAV7 217 aa15.17■□□□□ 0.02
TPX2-202ENST00000340513 TRIM6-TRIM34B2RNG4 842 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms